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All sourcesNASA NTRSDOE OSTI
NASA NTRS2017

Hyperspectral Radiative Transfer Modeling to Explore the Combined Retrieval of Biophysical Parameters and Canopy Fluorescence from FLEX - Sentinel-3 Tandem Mission Multi-Sensor Data

The FLuorescence EXplorer (FLEX) satellite mission, selected as ESA's 8th Earth Explorer, has been designed forthe measurement of sun-induced fluorescence (F) spectra emitted by plants. This will be accomplished through amulti-sensor approach by placing it in a common orbit in tandem with the Sentinel-3 (S3) mission, which willhave two optical sensors on board, OLCI (Ocean and Land Colour Instrument) and SLSTR (Sea and Land SurfaceTemperature Radiometer) to complement FLEX. These S3 instruments will be used in combination with theimaging spectrometers on board FLEX to provide data useful for atmospheric correction of FLEX data. However,a fully synergetic approach, i.e. by exploiting the spectral and directional information from all tandem missioninstruments together, is an attractive alternative which is explored in this paper. By employing all combined topof-atmosphere (TOA) spectral radiance data, one can (i) characterize the relevant optical properties of the atmosphere,(ii) retrieve biophysical canopy properties including the associated reflectance anisotropy, and (iii)retrieve a more accurate and consistent canopy F.Regarding retrieval methods, Fraunhofer Line Depth (FLD) and Spectral Fitting (SF) are well-known techniquesapplied to hyperspectral data. Both methods depend on a high spectral resolution and assume aLambertian (isotropic) canopy reflectance. However, most vegetation canopies are non-Lambertian. This impliesthat, in particular when ignoring the anisotropic surface reflection, substantial retrieval errors can occur due tothe interaction between atmospheric absorption bands and surface reflectance anisotropy. In this paper, a novelmethod based on spectral radiative transfer (RT) modeling is proposed, in which coupled RT models are used tosimulate TOA radiance spectra. These are then matched with ‘measured' spectra in order to retrieve surfacefluorescence, along with a suite of biophysical parameters, by model inversion through optimization. By applyingcoupled RT models of the soil-leaf-canopy and the surface-atmosphere systems, TOA radiance spectra canbe simulated for all optical sensors of this tandem mission. In this way, complex effects due to surface reflectanceanisotropy and the spectral sampling by the various instruments, which are difficult to compensate for in the endproducts, are properly taken into account by their incorporation in the forward modeling. Next, by model inversionof TOA radiance data via optimization, the most accurate F retrievals can be achieved in a consistentmanner, along with important canopy level biophysical parameters that may help interpret the F spectrum, suchas chlorophyll content and leaf area index (LAI). The potential of this approach has been explored in a numericalexperiment, and the results are presented in this paper. We find that, with the assumed well-characterized andplausible FLEX/S3 instrument performances, the simultaneous retrieval of biophysical canopy parameters and Fspectra would be possible with a remarkable accuracy, provided the correct atmospheric characterization isavailable.

Verhoef, Wouter↗
NASA NTRS2011

TPSAS-NF1676L-12839-DND

Hyper-spectral remote sensors, such as Atmospheric Infrared Sounder (AIRS) and Infrared Atmospheric Sounding Interferometer (IASI), provides top of atmospheric radiances with high information content on atmospheric and surface properties. In order to analyze these data in real time, fast, and accurate forward and inverse models are needed. We will describe a method of simultaneously retrieving atmospheric temperature, moisture, cloud, and surface properties using all available spectral channels without sacrificing computational speed. The method has been successfully applied to AIRS, IASI, and NAST-I data. By applying the same method to the current and future hyperspectral sounders, the derived products will have less errors due to biases introduced by different retrieval methods. We have compared the retrieved products to radiosondes, aircraft measurements and other validation dataset. Simulations have done to quantify retrieval errors associated with the retrievals. The essence of the method is to convert channel radiance spectra into super-channels by an Empirical Orthogonal Function (EOF) transformation. A Principal Component-based Radiative Transfer Model (PCRTM) developed at NASA Langley Research Center is used to calculate both the super-channel magnitudes and derivatives with respect to atmospheric profiles and other properties. The inversion algorithm is based on a non-linear Levenberg-Marquardt method with climatology covariance matrices and a priori information as constraints. One advantage of this approach is that it uses all information content from the hyper-spectral data so that the retrieval is less sensitive to instrument noise and eliminates the need for selecting a subset of the channels. The PCRTM forward model has also been used to performance end-to-end sensor performance simulations of the Climate Absolute Radiance and Refractivity Observatory (CLARREO).

Xu Liu↗
NASA NTRS2000

1984-1995 Evolution of Stratospheric Aerosol Size, Surface Area, and Volume Derived by Combining SAGE II and CLAES Extinction Measurements

This SAGE II Science Team task focuses on the development of a multi-wavelength, multi- sensor Look-Up-Table (LUT) algorithm for retrieving information about stratospheric aerosols from global satellite-based observations of particulate extinction. The LUT algorithm combines the 4-wavelength SAGE II extinction measurements (0.385 <= lambda <= 1.02 microns) with the 7.96 micron and 12.82 micron extinction measurements from the Cryogenic Limb Array Etalon Spectrometer (CLAES) instrument, thus increasing the information content available from either sensor alone. The algorithm uses the SAGE II/CLAES composite spectra in month-latitude-altitude bins to retrieve values and uncertainties of particle effective radius R(sub eff), surface area S, volume V and size distribution width sigma(sub g).

Russell, Philip B.↗
NASA NTRS2012

Detection Thresholds of Falling Snow from Satellite-Borne Active and Passive Sensors

Precipitation, including rain and snow, is a critical part of the Earth's energy and hydrology cycles. In order to collect information on the complete global precipitation cycle and to understand the energy budget in terms of precipitation, uniform global estimates of both liquid and frozen precipitation must be collected. Active observations of falling snow are somewhat easier to estimate since the radar will detect the precipitation particles and one only needs to know surface temperature to determine if it is liquid rain or snow. The challenges of estimating falling snow from passive spaceborne observations still exist though progress is being made. While these challenges are still being addressed, knowledge of their impact on expected retrieval results is an important key for understanding falling snow retrieval estimations. Important information to assess falling snow retrievals includes knowing thresholds of detection for active and passive sensors, various sensor channel configurations, snow event system characteristics, snowflake particle assumptions, and surface types. For example, can a lake effect snow system with low (~2.5 km) cloud tops having an ice water content (Iwe) at the surface of 0.25 g m-3 and dendrite snowflakes be detected? If this information is known, we can focus retrieval efforts on detectable storms and concentrate advances on achievable results. Here, the focus is to determine thresholds of detection for falling snow for various snow conditions over land and lake surfaces. The analysis relies on simulated Weather Research Forecasting (WRF) simulations of falling snow cases since simulations provide all the information to determine the measurements from space and the ground truth. Results are presented for active radar at Ku, Ka, and W-band and for passive radiometer channels from 10 to 183 GHz (Skofronick-Jackson, et al. submitted to IEEE TGRS, April 2012). The notable results show: (1) the W-Band radar has detection thresholds more than an order of magnitude lower than the future GPM sensors, (2) the cloud structure macrophysics influences the thresholds of detection for passive channels, (3) the snowflake microphysics plays a large role in the detection threshold for active and passive instruments, (4) with reasonable assumptions, the passive 166 GHz channel has detection threshold values comparable to the GPM DPR Ku and Ka band radars with ~0.05 g m-3 detected at the surface, or an ~0.5-1 mm hr-l melted snow rate (equivalent to 0.5-2 cm hr-l solid fluffy snowflake rate).

Jackson, Gail↗
NASA NTRS2011

Hyperspectral Remote Sensing of Atmosphere and Surface Properties

Atmospheric Infrared Sounder (AIRS), Infrared Atmospheric Sounding Interferometer (IASI), and Cross-track Infrared Sounder (CrIS) are all hyper-spectral satellite sensors with thousands of spectral channels. Top of atmospheric radiance spectra measured by these sensors contain high information content on atmospheric, cloud, and surface properties. Exploring high information content contained in these high spectral resolution spectra is a challenging task due to computation e ort involved in modeling thousands of spectral channels. Usually, only very small fractions (4{10 percent) of the available channels are included in physical retrieval systems or numerical weather forecast (NWP) satellite data assimilations. We will describe a method of simultaneously retrieving atmospheric temperature, moisture, cloud, and surface properties using all available spectral channels without sacrificing computational speed. The essence of the method is to convert channel radiance spectra into super-channels by an Empirical Orthogonal Function (EOF) transformation. Because the EOFs are orthogonal to each other, about 100 super-channels are adequate to capture the information content of the radiance spectra. A Principal Component-based Radiative Transfer Model (PCRTM) developed at NASA Langley Research Center is used to calculate both the super-channel magnitudes and derivatives with respect to atmospheric profiles and other properties. There is no need to perform EOF transformations to convert super channels back to spectral space at each iteration step for a one-dimensional variational retrieval or a NWP data assimilation system. The PCRTM forward model is also capable of calculating radiative contributions due to multiple-layer clouds. The multiple scattering effects of the clouds are efficiently parameterized. A physical retrieval algorithm then performs an inversion of atmospheric, cloud, and surface properties in super channel domain directly therefore both reducing the computational need and preserving the information content of the IASI measurements. The inversion algorithm is based on a non-linear Levenberg-Marquardt method with climatology covariance matrices and a priori information as constraints. One advantage of this approach is that it uses all information content from the hyper-spectral data so that the retrieval is less sensitive to instrument noise and eliminates the need for selecting a sub-set of the channels.

Liu, Xu↗
NASA NTRS1987

Information retrieval from holographic interferograms: Fundamentals and problems

Holographic interferograms can contain large amounts of information about flow and temperature fields. Their information content can be very high because they can be viewed from many different directions. This multidirectionality, and fringe localization add to the information contained in the fringe pattern if diffuse illumination is used. Additional information, and increased accuracy can be obtained through the use of dual reference wave holography to add reference fringes or to effect discrete phase shift or hetrodyne interferometry. Automated analysis of fringes is possible if interferograms are of simple structure and good quality. However, in practice a large number of practical problems can arise, so that a difficult image processing task results.

Vest, Charles M.↗
NASA NTRS2009

Efficient Method for Analyzing Hyperspectral Remote Sensing Data

The current and next generation satellite infrared sensors such as AIRS, IASI, CrIS, and CLARREO all have one thing in common: large number of spectral channels. In order to fully utilize the information content of these sensors, a large number of Radiative Transfer (RT) calculations through the inhomogeneous atmosphere are needed. It is also computationally intensive to invert atmospheric and surface properties using all the channels. Usually, only subsets of channels are used to perform physical inversions for atmospheric profiles. We will explore ways to speed up RT calculations and inversions and test the algorithms using data from the Infrared Atmospheric Sounding Interferometer (IASI) satellite instrument. We will describe a retrieval algorithm using a Principal Component-based Radiative Transfer Model (PCRTM) for generating atmospheric temperature/moisture/ozone profiles and surface properties. The retrieval algorithm performs both the radiative transfer calculations and inversions in the Principal Component (PC) domain. The inversion algorithm is based on a non-linear Levenberg- Marquardt method with climatology covariance matrices and a priori information as constraints. One advantage of this approach is that it uses all information content from the ultraspectral data so that the retrieval is less sensitive to instrument noise and eliminates the need for selecting a sub-set of the channels. We will also use data collected during the Joint Airborne IASI Validation Experiment (JAIVEx) field campaign to validate the algorithm and IASI retrievals.

Liu, Xu↗
NASA NTRS2011

Vegetation Water Content Mapping in a Diverse Agricultural Landscape: National Airborne Field Experiment 2006

Mapping land cover and vegetation characteristics on a regional scale is critical to soil moisture retrieval using microwave remote sensing. In aircraft-based experiments such as the National Airborne Field Experiment 2006 (NAFE 06), it is challenging to provide accurate high resolution vegetation information, especially on a daily basis. A technique proposed in previous studies was adapted here to the heterogenous conditions encountered in NAFE 06, which included a hydrologically complex landscape consisting of both irrigated and dryland agriculture. Using field vegetation sampling and ground-based reflectance measurements, the knowledge base for relating the Normalized Difference Water Index (NDWI) and the vegetation water content was extended to a greater diversity of agricultural crops, which included dryland and irrigated wheat, alfalfa, and canola. Critical to the generation of vegetation water content maps, the land cover for this region was determined from satellite visible/infrared imagery and ground surveys with an accuracy of 95.5% and a kappa coefficient of 0.95. The vegetation water content was estimated with a root mean square error of 0.33 kg/sq m. The results of this investigation contribute to a more robust database of global vegetation water content observations and demonstrate that the approach can be applied with high accuracy. Keywords: Vegetation, field experimentation, thematic mapper, NDWI, agriculture.

Cosh, Michael H.↗
NASA NTRS2012

Detection Thresholds of Falling Snow from Satellite-Borne Active and Passive Sensors

Precipitation, including rain and snow, is a critical part of the Earth's energy and hydrology cycles. Precipitation impacts latent heating profiles locally while global circulation patterns distribute precipitation and energy from the equator to the poles. For the hydrological cycle, falling snow is a primary contributor in northern latitudes during the winter seasons. Falling snow is the source of snow pack accumulations that provide fresh water resources for many communities in the world. Furthermore, falling snow impacts society by causing transportation disruptions during severe snow events. In order to collect information on the complete global precipitation cycle, both liquid and frozen precipitation must be collected. The challenges of estimating falling snow from space still exist though progress is being made. These challenges include weak falling snow signatures with respect to background (surface, water vapor) signatures for passive sensors over land surfaces, unknowns about the spherical and non-spherical shapes of the snowflakes, their particle size distributions (PSDs) and how the assumptions about the unknowns impact observed brightness temperatures or radar reflectivities, differences in near surface snowfall and total column snow amounts, and limited ground truth to validate against. While these challenges remain, knowledge of their impact on expected retrieval results is an important key for understanding falling snow retrieval estimations. Since falling snow from space is the next precipitation measurement challenge from space, information must be determined in order to guide retrieval algorithm development for these current and future missions. This information includes thresholds of detection for various sensor channel configurations, snow event system characteristics, snowflake particle assumptions, and surface types. For example, can a lake effect snow system with low (approx 2.5 km) cloud tops having an ice water content (IWC) at the surface of 0.25 g / cubic m and dendrite snowflakes be detected? If this information is known, we can focus retrieval efforts on detectable storms and concentrate advances on achievable results. Here, the focus is to determine thresholds of detection for falling snow for various snow conditions over land and lake surfaces. The results rely on simulated Weather Research Forecasting (WRF) simulations of falling snow cases since simulations provide all the information to determine the measurements from space and the ground truth. Sensitivity analyses were performed to better ascertain the relationships between multifrequency microwave and millimeter-wave sensor observations and the falling snow/underlying field of view. In addition, thresholds of detection for various sensor channel configurations, snow event system characteristics, snowflake particle assumptions, and surface types were studied. Results will be presented for active radar at Ku, Ka, and W-band and for passive radiometer channels from 10 to 183 GHz.

Gail Skofronick-Jackson↗
NASA NTRSDate not supplied

Investigation of the Potential for Lidar & Polarimeter Combined Aerosol Retrievals Using Various Instrument Combinations

As a scientific community, we are motivated to achieve better observational capabilities for aerosols, to reduce uncertainties about aerosol’s role in climate. Encouraged by the National Academies Decadal Survey, many are looking to the synergy of lidar and polarimeter as a means of achieving improved measurements. Polarimetric observations of total-column radiances have excellent sensitivity to aerosol size distribution and absorption properties. Active lidar measurements have fewer wavelengths and view angles and therefore more limited sensitivity to aerosol microphysical properties such as complex refractive index. Yet the advantage of vertically resolved profiles is game-changing, especially given that models contain significant uncertainty about the vertical distribution of aerosol and that polarimeter and other passive retrievals must make assumptions about vertical distribution which can impact performance. To optimize the synergy, a joint polarimeter + lidar mission requires a joint retrieval. However, the exact instruments that will be launched on a future satellite are unknown, and the capabilities of polarimeters and lidars cover a large range. In this study, we perform information content analysis for a range of nominal instrument combinations. The methodology is ideal for assessing the impact of measurements and a priori information (assumptions and constraints) with respect to the desired retrieval products, and for comparing measurement systems. It has advantages that make it useful in advance of or in parallel with retrieval development, such as producing quantitatively useful comparisons even for retrieval scenarios that are significantly underdetermined and therefore impossible to retrieve without significant assumptions, and it is not impacted by retrieval-specific sources of error such as incomplete or incorrect convergence which can complicate the interpretation of a retrieval performance analysis. Here, we will derive the expected uncertainty in retrieved aerosol concentration, effective radius, fine mode fraction and single scattering albedo, for a combination of a polarimeter with various grades of lidar, from an elastic backscatter lidar, similar to the pathfinder CALIOP on the CALIPSO satellite, to a multi-wavelength high spectral resolution lidar.

Sharon P Burton↗
NASA NTRS1987

A microwave radiometer weather-correcting sea ice algorithm

A new algorithm for estimating the proportions of the multiyear and first-year sea ice types under variable atmospheric and sea surface conditions is presented, which uses all six channels of the SMMR. The algorithm is specifically tuned to derive sea ice parameters while accepting error in the auxiliary parameters of surface temperature, ocean surface wind speed, atmospheric water vapor, and cloud liquid water content. Not only does the algorithm naturally correct for changes in these weather conditions, but it retrieves sea ice parameters to the extent that gross errors in atmospheric conditions propagate only small errors into the sea ice retrievals. A preliminary evaluation indicates that the weather-correcting algorithm provides a better data product than the 'UMass-AES' algorithm, whose quality has been cross checked with independent surface observations. The algorithm performs best when the sea ice concentration is less than 20 percent.

Walters, J. M.↗
NASA NTRS2007

Strategies for Information Retrieval and Virtual Teaming to Mitigate Risk on NASA's Missions

Following the loss of NASA's Space Shuttle Columbia in 2003, it was determined that problems in the agency's organization created an environment that led to the accident. One component of the proposed solution resulted in the formation of the NASA Engineering Network (NEN), a suite of information retrieval and knowledge sharing tools. This paper describes the implementation of this set of search, portal, content management, and semantic technologies, including a unique meta search capability for data from distributed engineering resources. NEN's communities of practice are formed along engineering disciplines where users leverage their knowledge and best practices to collaborate and take informal learning back to their personal jobs and embed it into the procedures of the agency. These results offer insight into using traditional engineering disciplines for virtual teaming and problem solving.

communities of practices↗
NASA NTRS2022

Employing Relaxed Smoothness Constraints on Imaginary Part of Refractive Index in AERONET Aerosol Retrieval Algorithm

In the Aerosol Robotic Network (AERONET) retrieval algorithm, smoothness constraints on the imaginary part of the refractive index provide control of retrieved spectral dependence of aerosol absorption by preventing the inversion code from fitting the noise in optical measurements and thus avoiding unrealistic oscillations of retrievals with wavelength. The history of implementation of the smoothness constraints in the AERONET retrieval algorithm is discussed. It is shown that the latest version of the smoothness constraints on the imaginary part of refractive index, termed standard and employed by Version 3 of the retrieval algorithm, should be modified to account for strong variability of light absorption by brown-carbon-containing aerosols in UV through mid-visible parts of the solar spectrum. In Version 3 strong spectral constraints were imposed at high values of the Ångström exponent (440–870 nm) since black carbon was assumed to be the primary absorber, while the constraints became increasingly relaxed as aerosol exponent deceased to allow for wavelength dependence of absorption for dust aerosols. The new version of the smoothness constraints on the imaginary part of the refractive index assigns different weights to different pairs of wavelengths, which are the same for all values of the Ångström exponent. For example, in the case of four-wavelength input, the weights assigned to short-wavelength pairs (440–675, 675–870 nm) are small so that smoothness constraints do not suppress natural spectral variability of the imaginary part of the refractive index. At longer wavelengths (870–1020 nm), however, the weight is 10 times higher to provide additional constraints on the imaginary part of refractive index retrievals of aerosols with a high Ångström exponent due to low sensitivity to aerosol absorption for longer channels at relatively low aerosol optical depths. The effect of applying the new version of smoothness constraints, termed relaxed, on retrievals of single-scattering albedo is analyzed for case studies of different aerosol types: black- and brown-carbon-containing fine mode aerosols, mineral dust coarse mode aerosols, and urban industrial fine mode aerosol. It is shown that for brown-carbon-containing aerosols employing the relaxed smoothness constraints resulted in significant reduction in retrieved single-scattering albedo and spectral residual errors (compared to standard) at the short wavelengths. For example, biomass burning smoke cases showed a reduction in single-scattering albedo and spectral residual error at 380 nm of ∼ 0.033 and ∼ 17 %, respectively, for the Rexburg site and ∼ 0.04 and ∼ 12.7 % for the Rimrock site, both AERONET sites in Idaho, USA. For a site with very high levels of black-carbon-containing aerosols (Mongu, Zambia), the effect of modification in the smoothness constraints was minor. For mineral dust aerosols at small Ångström exponent values (Mezaira site, UAE), the spectral constraint on the imaginary part of the refractive index was already relaxed in Version 3; therefore the new relaxed constraint results in minimal change. In the case of weakly absorbing urban industrial aerosols at the GSFC site, there are significant changes in retrieved single-scattering albedo using relaxed assumption, especially reductions at longer wavelengths: ∼ 0.016 and ∼ 0.02 at 875 and 1020 nm, respectively, for 440 nm aerosol optical depth (AOD) ∼ 0.3. The modification of smoothness constraints on the imaginary part of the refractive index has a minor effect on retrievals of other aerosol parameters such as the real part of the refractive index and parameters of the aerosol size distribution. The implementation of the relaxed smoothness constraints on the imaginary part of the refractive index in the next version of the AERONET inversion algorithm will produce significant impacts at some sites in short wavelength channels (380 and 440 nm) for some biomass burning smoke cases with significant brown carbon content and possibly in mid-visible channels (500 and 675 nm) to near-infrared channels (870 to 1020 nm) for some urban industrial aerosol types. However, most differences in single-scattering albedo retrievals between those applying the new relaxed constraint and the standard constraint will be within the uncertainty of the single-scattering albedo retrievals, depending on the level of aerosol optical depth, Ångström exponent, brown carbon content and wavelength.

Aliaksandr Siniuk↗
NASA NTRS2016

Biospecimen Retrieval from NASA's Rodent Research-1: Maximizing Science Return from Flight Missions

Rodent Research (RR)-1 was conducted to validate flight hardware, operations, and science capabilities that were developed to support long duration missions on the International Space Station. After 37 days in microgravity twenty mice were euthanized and frozen on orbit. Upon return to Earth the carcasses were dissected and yielded 32 different types of tissues from each mouse and over 3200 tissue aliquots. Many tissues were distributed to the Space Life and Physical Sciences (SLPS) Biospecimen Sharing Program (BSP) Principal Investigators (PIs) through the Ames Life Science Data Archive (ALSDA). A second round of dissections was performed to collect additional tissues from the remaining carcasses thawed for a second time for additional BSP PIs. Tissues retrieved included vaginal walls, aorta, pelvis, brown adipose tissue, tail, spine and forearms. Although the analyses are still in progress, some of the PIs have reported that the quality of the tissues was acceptable for their study. In a separate experiment we tested the RNA quality of the tissues that were dissected from frozen carcasses that were subjected to euthanasia, freezing, first and second thaw dissections. Timelines simulated the on-orbit RR-1 procedures to assess the quality of the tissues retrieved from the second thaw dissections. We analyzed the RIN values of select tissues including kidney, brain, white adipose tissue (WAT) and brown adipose tissue (BAT). Overall the RIN values from the second thaw were lower compared to those from the first by about a half unit; however, the tissues yielded RNA that are acceptable quality for some quantitative gene expression assays. Interestingly, RIN values of brain tissues were 8.4+/-0.6 and 7.9+/-0.7 from first and second round dissections, respectively (n5). Kidney and WAT yielded RIN values less than 8 but they can still be used for qPCR. BAT yielded higher quality RNA (8.2+/-0.5) than WAT (5.2+/-20.9), possibly due to the high fat content. Together, these data show that select tissues can be utilized for gene expression studies even if they are retrieved from carcasses that were subjected to at least two freezing and thawing processes; this further expands science return from valuable and infrequent rodent experiments in space.

rodents↗
NASA NTRS2016

Biospecimen Retrieval from NASA's Rodent Research-1: Maximizing Science Return from Flight Missions

Rodent Research (RR)-1 was conducted to validate flight hardware, operations, and science capabilities that were developed to support long duration missions on the International Space Station. After 37 days in microgravity twenty mice were euthanized and frozen on orbit. Upon return to Earth the carcasses were dissected and yielded 32 different types of tissues from each mouse and over 3200 tissue aliquots. Many tissues were distributed to the Space Life and Physical Sciences (SLPS) Biospecimen Sharing Program (BSP) Principal Investigators (PIs) through the Ames Life Science Data Archive (ALSDA). A second round of dissections was performed to collect additional tissues from the remaining carcasses thawed for a second time for additional BSP PIs. Tissues retrieved included vaginal walls, aorta, pelvis, brown adipose tissue, tail, spine and forearms. Although the analyses are still in progress, some of the PIs have reported that the quality of the tissues was acceptable for their study. In a separate experiment we tested the RNA quality of the tissues that were dissected from frozen carcasses that were subjected to euthanasia, freezing, first and second thaw dissections. Timelines simulated the on-orbit RR-1 procedures to assess the quality of the tissues retrieved from the second thaw dissections. We analyzed the RIN values of select tissues including kidney, brain, white adipose tissue (WAT) and brown adipose tissue (BAT). Overall the RIN values from the second thaw were lower compared to those from the first by about a half unit; however, the tissues yielded RNA that are acceptable quality for some quantitative gene expression assays. Interestingly, RIN values of brain tissues were 8.4+/-0.6 and 7.9+/-0.7 from first and second round dissections, respectively (n=5). Kidney and WAT yielded RIN values less than 8 but they can still be used for qPCR. BAT yielded higher quality RNA (8.2+/-0.5) than WAT (5.22+/-0.9), possibly due to the high fat content. Together, these data show that select tissues can be utilized for gene expression studies even if they are retrieved from carcasses that were subjected to at least two freezing and thawing processes; this further expands science return from valuable and infrequent rodent experiments in space.

rodent↗
NASA NTRS1995

Spectroscopic study of the seasonal variation of carbon monoxide vertical distribution above Kitt Peak

A method to retrieve elements of the carbon monoxide (CO) vertical distribution from ground-based high-resolution infrared solar spectra has been developed. The method is based on the fact that the total column amount retrieved by nonlinear least squares spectral fitting techniques depends on the shape of the assumed a priori profile and this dependence is a function of the absorption line intensity and the lower state energy of the transition. Four CO lines between 2057 and 2159/cm have been selected and the method has been tested on synthetic spectra. The CO total column content and average concentrations in two atmospheric layers (surface to 400 mbar and 400 mbar to the top of the atmosphere) can be retrieved with precisions of about 1% and less than 10%, respectively. Solar spectra recorded at Kitt Peak from 1982 to 1993 have been analyzed. The CO total column and the average concentration in the two layers show an asymmetrical seasonal cycle with extreme values of (1.1-2.1) x 10(exp 18) molecules cm(exp -2), (50-80) parts per billion by volume (ppbv) in the top layer and (80-160) ppbv in the bottom layer, and precisions of 1, 3, and 6%, respectively; a spring maximum and late summer minimum are observed.

Pougatchev, N. S.↗
NASA NTRS1996

Precipitable Water Variability Using SSM/I and GOES VAS Pathfinder Data Sets

Determining moisture variability for all weather scenes is critical to understanding the earth's hydrologic cycle and global climate changes. Remote sensing from geostationary satellites provides the necessary temporal and spatial resolutions necessary for global change studies. Due to antenna size constraints imposed with the use of microwave radiometers, geostationary satellites have carried instruments passively measuring radiation at infrared wavelengths or shorter. The shortfall of using infrared instruments in moisture studies lies in its inability to sense terrestrial radiation through clouds. Microwave emissions, on the other hand, are mostly unaffected by cloudy atmospheres. Land surface emissivity at microwave frequencies exhibit both high temporal and spatial variability thus confining moisture retrievals at microwave frequencies to over marine atmospheres (a near uniform cold background). This study intercompares the total column integrated water content Precipitable Water, (PW) as derived from both the Special Sensor Microwave Imager (SSM/I) and the Geostationary Operational Environmental Satellite (GOES) VISSR Atmospheric Sounder (VAS) pathfinder data sets. PW is a bulk parameter often used to quantify moisture variability and is important to understanding the earth's hydrologic cycle and climate system. This research has been spawned in an effort to combine two different algorithms which together can lead to a more comprehensive quantification of global water vapor. The approach taken here is to intercompare two independent PW retrieval algorithms and to validate the resultant retrievals against an existing data set, namely the European Center for Medium range Weather Forecasts (ECMWF) model analysis data.

Lerner, Jeffrey A.↗