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At least 199 records · Page 11
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

A Graphical Model for Fusing Diverse Microbiome Data

This paper develops a Bayesian graphical model for fusing disparate types of count data. The motivating application is the study of bacterial communities from diverse high-dimensional features, in this case, transcripts, collected from different treatments. In such datasets, there are no explicit correspondences between the communities and each corresponds to different factors, making data fusion challenging. We introduce a flexible multinomial-Gaussian generative model for jointly modeling such count data. This latent variable model jointly characterizes the observed data through a common multivariate Gaussian latent space that parameterizes the set of multinomial probabilities of the transcriptome counts. The covariance matrix of the latent variables induces a covariance matrix of co-dependencies between all the transcripts, effectively fusing multiple data sources. We present a computationally scalable variational Expectation-Maximization (EM) algorithm for inferring the latent variables and the parameters of the model. Here, the inferred latent variables provide a common dimensionality reduction for visualizing the data and the inferred parameters provide a predictive posterior distribution. In addition to simulation studies that demonstrate the variational EM procedure, we apply our model to a bacterial microbiome dataset.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS2009

A Contribution by Ice Nuclei to Global Warming

Ice nuclei (IN) significantly affect clouds via supercooled droplets, that in turn modulate atmospheric radiation and thus climate change. Since the IN effect is relatively strong in stratiform clouds but weak in convective ones, the overall effect depends on the ratio of stratiform to convective cloud amount. In this paper, 10 years of TRMM (Tropical Rainfall Measuring Mission) satellite data are analyzed to confirm that stratiform precipitation fraction increases with increasing latitude, which implies that the IN effect is stronger at higher latitudes. To quantitatively evaluate the IN effect versus latitude, large-scale forcing data from ten field campaigns are used to drive a CRM (cloud-resolving model) to generate longterm cloud simulations. As revealed in the simulations, the increase in the net downward radiative flux at the TOA (top of the atmosphere) from doubling the current IN concentrations is larger at higher latitude, which is attributed to the meridional tendency in the stratiform precipitation fraction. Surface warming from doubling the IN concentrations, based on the radiative balance of the globe, is compared with that from anthropogenic COZ . It is found that the former effect is stronger than the latter in middle and high latitudes but not in the Tropics. With regard to the impact of IN on global warming, there are two factors to consider: the radiative effect from increasing the IN concentration and the increase in IN concentration itself. The former relies on cloud ensembles and thus varies mainly with latitude. In contrast, the latter relies on IN sources (e.g., the land surface distribution) and thus varies not only with latitude but also longitude. Global desertification and industrialization provide clues on the geographic variation of the increase in IN concentration since pre-industrial times. Thus, their effect on global warming can be inferred and then be compared with observations. A general match in geographic and seasonal variations between the inferred and observed warming suggests that IN may have contributed positively to global warming over the past decades, especially in middle and high latitudes.

Zeng, Xiping↗
NASA NTRS2005

Dependence of Ru2O3 Activity on Composition of Silicate Melts: Using Statistical Correlations to Infer Thermodynamic Behavior in the Melt

Understanding variations in activity with composition is an essential step in improving prediction of partition coefficients during magma evolution. Variations in activity with composition are complex and do not generally exhibit ideal behavior relative to a traditional melt-component set. Although deviations from component ideality can be modeled numerically by simply fitting to compositional variables (such as in a regular or subregular solution model), such models have not been particularly successful for describing variations in trace component activities. A better approach might be to try to identify components that do a better job of describing the behavior of the species in the melt. Electrochemical Measurement of Ru2O3 activities: Electrodes were inserted into silicate melt beads of various compositions (Table 1) suspended on Ptwire loops in a 1-atm gas mixing furnace. An electrical potential was imposed between the electrodes, the imposed potential increasing along a step ramp with a pulse imposed on each step (Fig. 1). Current flows between electrodes when electroactive species in the melt are oxidized or reduced at the electrodes. The resulting current was measured at the top and bottom of the voltage pulse, and the difference (the differential current) was plotted against potential. The peak of the resulting curve is related to the activity coefficient for the particular electroactive species (Ru2O3) in the melt [1, 2, 3]. A significant part of the nonideal contribution to activity is due not to intrinsic properties of the component in the melt, but to our ignorance about the state and mixing properties of the component in the melt.

Colson, R. O.↗
DOE OSTI2023

Microphysical Modeling of Fault Slip and Stability Transition in Hydrothermal Conditions

Abstract Field and laboratory observations indicate that the frictional behaviors of faults depend on hydrothermal conditions. We extend the microphysical Chen‐Niemeijer‐Spiers (CNS) model to hydrothermal conditions by using the observed temperature variation of indentation hardness to infer the temperature dependence of a microphysical parameter . This parameter is assumed constant in previous versions of the CNS model. A simple spring‐slider system is used to simulate the fault system and investigate the steady‐state frictional behaviors of wet granite gouges. Our numerical results quantitatively reproduce experimental data showing the frictional‐plastic transition. The results also describe the transition from velocity‐strengthening at low temperatures (<160°C), to velocity‐weakening at intermediate temperatures (160°C–370°C), then back to velocity‐strengthening at high temperatures (>370°C). In our extended CNS model, these results suggest that the dominant shear deformation mechanism does transition from frictional granular flow to fully plastic creep with increasing temperature.

58 GEOSCIENCES↗
DOE OSTI2024

Stomatal Parameters in a Changing Environment

Here, we recommend that stomatal slope parameters (g 1 ) be inferred by inversion so that variations in g 1 may be attributed to variations physiological and environmental conditions. Understanding g1 will advance predictions of plant gas exchange and performance under global climate.

Stomatal conductance modeling↗
NASA NTRS1975

Error analysis of Dobson spectrophotometer measurements of the total ozone content

A study of techniques for measuring atmospheric ozone is reported. This study represents the second phase of a program designed to improve techniques for the measurement of atmospheric ozone. This phase of the program studied the sensitivity of Dobson direct sun measurements and the ozone amounts inferred from those measurements to variation in the atmospheric temperature profile. The study used the plane - parallel Monte-Carlo model developed and tested under the initial phase of this program, and a series of standard model atmospheres.

Holland, A. C.↗
NASA NTRS1981

Observed variability in the Fraunhofer line spectrum of solar flux, 1975 - 1980

Over the five years double-pass spectrometer observations of the Sun-as-a-star revealed significant changes in line intensities. The photospheric component weakened linearly with time 0 to 2.3%. From a lack of correlation between these line weakenings and solar activity indicators like sunspots and plage, a global variation of surface properties is inferred. Model-atmosphere analysis suggests a slight reduction in the lower-photospheric temperature gradient corresponding to a 15% increase in the mixing length within the granulation layer. Chromospheric lines such as Ca II H and K, Ca II 8543 and the CN band head weaken synchronously with solar activity. Thus, the behavior of photospheric and chromospheric lines is markedly different, with the possibility of secular change for the former.

Livingston, W.↗
NASA NTRS1981

The seasonal variations of ozone and temperature in the middle and the upper stratosphere

The seasonal variations in ozone and temperature inferred from the Nimbus-4 BUV (Backscatter Ultraviolet Spectrometer) and the SCR (Selective Chopper Radiometer) experiments are compared with predictions based on a simplified radiative photochemical model. It is shown that the observations, in agreement with the model calculations, show a systematic phase shift from a summer maximum at 10 mb to a winter maximum at 1 mb with equinoctial maxima at intermediate heights. In contrast, the temperature between these pressure levels shows no appreciable phase shift and the summer maximum prevails at all heights. The observed phase differences in ozone and temperature are shown to be a manifestation of the radiative feedback on the photochemistry of the upper stratosphere.

Chandra, S.↗
NASA NTRS1998

Perspectives on the Future Search for Life on Mars and Beyond

One can view the search for life on Mars in two ways: first, as the initial step in the search for life elsewhere, and second, as the one place where in situ methods for life detection can be tested and proved via sample return. After Mars, most of the life detection will he done via in situ studies with data return. Mars offers us the opportunity to fine tune our methods - perhaps for a long time to come. Our group is involved in the development of methods for life detection that are independent of specific signals used for detection of life on Earth. These approaches include general indicators of metabolic activity and organismal structure and composition. Using such approaches, we hope to detect the signals of life (biosignatures) that are independent of preconceived notions and yet are convincing and unambiguous. The approaches we are focusing on include stable isotopic analyses of metals, mineral formation and disolution, and elemental analysis. These methods allow us to examine samples at a variety of scales, looking for nonequilibrium distribution of elements that serve as biosignatures. For futures studies of Mars and beyond, they, or some variation of them, should allow inference or proof of life in non-Earth locations.

Nealson, K. H.↗
NASA NTRS2004

AGN Black Hole Masses from Reverberation Mapping

Emission-line variability data on bright AGNs indicates that the central objects in these sources have masses in the million to few-hundred million solar mass range. The time-delayed response of the emission lines to continuum variations can be used to infer the size of the line-emitting region via light travel-time arguments. By combining these sizes with the Doppler widths of the variable part of the emission lines, a virial mass estimate can be obtained. For three especially well-studied sources, NGC 5548, NGC 7469, and 3C 390.3, data on multiple emission lines can be used to test the virial hypothesis. In each of these cases, the response time of the various emission lines is anticorrelated with the line width, with the dependence as expected for gravitationally bound motion of the line-emitting clouds, i.e., that the square of the Doppler line width is inversely proportional to the emission-line time delay. Virial masses based on the Balmer lines have now been measured for about three dozen AGNs. Systematic effects currently limit the accuracy of these masses to a factor of several, but characteristics of the radius-luminosity and mass-luminosity relationships for AGNs are beginning to emerge.

Peterson, B. M.↗
NASA NTRS2006

Introduction to MODIS Cloud Products

The Earth's radiative energy balance and hydrological cycle are fundamentally coupled with the distribution and properties of clouds. Therefore, the ability to remotely infer cloud properties and their variation in space and time is crucial for establishing climatologies as a reference for validation of present-day climate models and in assessing future climate change. Remote cloud observations also provide data sets useful for testing and improving cloud model physics, and for assimilation into numerical weather prediction models. The MODerate Resolution Imaging Spectroradiometer (MODIS) imagers on the Terra and Aqua Earth Observing System (EOS) platforms provide the capability for globally retrieving these properties using passive solar reflectance and infrared techniques. In addition to providing measurements similar to those offered on a suite of historical operational weather platforms such as the Advanced Very High Resolution Radiometer (AVHRR), the High-resolution Infrared Radiation Sounder (HIRS), and the Geostationary Operational Environmental Satellite (GOES), MODIS provides additional spectral and/or spatial resolution in key atmospheric bands, along with on-board calibration, to expand the capability for global cloud property retrievals. The core MODIS operational cloud products include cloud top pressure, thermodynamic phase, optical thickness, particle size, and water path, and are derived globally at spatial resolutions of either 1- or 5-km (referred to as Level-2 or pixel-level products). In addition, the MODIS atmosphere team (collectively providing cloud, aerosol, and clear sky products) produces a combined gridded product (referred to as Level-3) aggregated to a 1 equal-angle grid, available for daily, eight-day, and monthly time periods. The wealth of information available from these products provides critical information for climate studies as well as the continuation and improved understanding of existing satellite-based cloud climatologies derived from heritage instruments. This chapter provides an overview of the MODIS Level-2 and -3 operational cloud products.

Baum, Bryan A.↗
NASA NTRS2008

Transmission Electron Microscopy of Cometary Residues from Micron-Sized Craters in the Stardust Al-Foils

We report Transmission Electron Microscopy (TEM) investigations of micro-craters that originated from hypervelocity impacts of comet 81P/Wild 2 dust particles on the aluminium foil of the Stardust collector. The craters were selected by Scanning Electron Microscopy (SEM) and then prepared by Focused Ion Beam (FIB) milling techniques in order to provide electron transparent cross-sections for TEM studies. The crater residues contain both amorphous and crystalline materials in varying proportions and compositions. The amorphous component is interpreted as resulting from shock melting during the impact and the crystalline phases as relict minerals. The latter show evidence for shock metamorphism. Based on the residue morphology and the compositional variation, the impacting particles are inferred to have been dominated by mixtures of submicron olivine, pyroxene and Fe-sulfide grains, in agreement with prior results of relatively coarse-grained mineral assemblages in the aerogel collector.

Leroux, Hugues↗
NASA NTRS2017

Remote Sensing of Crystal Shapes in Ice Clouds

Ice crystals in clouds exist in a virtually limitless variation of geometries. The most basic shapes of ice crystals are columnar or plate-like hexagonal prisms with aspect ratios determined by relative humidity and temperature. However, crystals in ice clouds generally display more complex structures owing to aggregation, riming and growth histories through varying temperature and humidity regimes. Crystal shape is relevant for cloud evolution as it affects microphysical properties such as fall speeds and aggregation efficiency. Furthermore, the scattering properties of ice crystals are affected by their general shape, as well as by microscopic features such as surface roughness, impurities and internal structure. To improve the representation of ice clouds in climate models, increased understanding of the global variation of crystal shape and how it relates to, e.g., location, cloud temperature and atmospheric state is crucial. Here, the remote sensing of ice crystal macroscale and microscale structure from airborne and space-based lidar depolarization observations and multi-directional measurements of total and polarized reflectances is reviewed. In addition, a brief overview is given of in situ and laboratory observations of ice crystal shape as well as the optical properties of ice crystals that serve as foundations for the remote sensing approaches. Lidar depolarization is generally found to increase with increasing cloud height and to vary with latitude. Although this variation is generally linked to the variation of ice crystal shape, the interpretation of the depolarization remains largely qualitative and more research is needed before quantitative conclusions about ice shape can be deduced. The angular variation of total and polarized reflectances of ice clouds has been analyzed by numerous studies in order to infer information about ice crystal shapes from them. From these studies it is apparent that pristine crystals with smooth surfaces are generally inconsistent with the data and thus crystal impurity, distortion or surface roughness is prevalent. However, conclusions about the dominating ice shapes are often inconclusive and contradictory and are highly dependent on the limited selection of shapes included in the investigations. Since ice crystal optical properties are mostly determined by the aspect ratios of the crystal components and their microscale structure, it is advised that remote sensing applications focus on the variation of these ice shape characteristics, rather than on the macroscale shape or habit. Recent studies use databases with nearly continuous ranges of crystal component aspect ratio and-or roughness levels to infer the variation of ice crystal shape from satellite and airborne remote sensing measurements. Here, the rationale and results of varying strategies for the remote sensing of ice crystal shape are reviewed. Observed systematic variations of ice crystal geometry with location, cloud height and atmospheric state suggested by the data are discussed. Finally, a prospective is given on the future of the remote sensing of ice cloud particle shapes.

clouds↗
NASA NTRS1992

Long-term variations in abundance and distribution of sulfuric acid vapor in the Venus atmosphere inferred from Pioneer Venus and Magellan radio occultation studies

Radio occultation experiments have been used to study various properties of planetary atmospheres, including pressure and temperature profiles, and the abundance profiles of absorbing constituents in those planetary atmospheres. However, the reduction of amplitude data from such experiments to determine abundance profiles requires the application of the inverse Abel transform (IAT) and numerical differentiation of experimental data. These two operations preferentially amplify measurement errors above the true signal underlying the data. A new technique for processing radio occultation data has been developed that greatly reduces the errors in the derived absorptivity and abundance profiles. This technique has been applied to datasets acquired from Pioneer Venus Orbiter radio occultation studies and more recently to experiments conducted with the Magellan spacecraft. While primarily designed for radar studies of the Venus surface, the high radiated power (EIRP) from the Magellan spacecraft makes it an ideal transmitter for measuring the refractivity and absorptivity of the Venus atmosphere by such experiments. The longevity of the Pioneer Venus Orbiter has made it possible to study long-term changes in the abundance and distribution of sulfuric acid vapor, H2SO4(g), in the Venus atmosphere between 1979 and 1992. The abundance of H2SO4(g) can be inferred from vertical profiles of 13-cm absorptivity profiles retrieved from radio occultation experiments. Data from 1979 and 1986-87 suggest that the abundance of H2SO4(g) at latitudes northward of 70 deg decreased over this time period. This change may be due to a period of active volcanism in the late 1970s followed by a relative quiescent period, or some other dynamic process in the Venus atmosphere. While the cause is not certain, such changes must be incorporated into dynamic models of the Venus atmosphere. Potentially, the Magellan spacecraft will extend the results of Pioneer Venus Orbiter and allow the continued monitoring of the abundance of distribution of H2SO4(g) in the Venus atmosphere, as well as other interesting atmospheric properties. Without such measurements it will be difficult to address other issues such as the short-term spatial variability of the abundance of H2SO4(g) at similar latitudes in Venus atmosphere, and the identities of particles responsible for large-scale variations observed in NIR images.

Jenkins, J. M.↗
DOE OSTI2025

The DESI Y1 RR Lyrae catalog I: Empirical modeling of the cyclic variation of spectroscopic properties and a chemodynamical analysis of the outer halo

We present the catalog of RR Lyrae stars observed in the first year of operations of the Dark Energy Spectroscopic Instrument (DESI) survey. This catalog contains 6,240 RR Lyrae stars out to $\sim100$ kpc from the Galactic center and over 12,000 individual epochs with homogeneously-derived stellar atmospheric parameters. We introduce a novel methodology to model the cyclical variation of the spectroscopic properties of RR Lyrae from single-epoch measurements. We employ this method to infer the radial velocity and effective temperature variation of fundamental mode and first-overtone RR Lyrae stars and to determine their systemic velocities and mean temperatures. For fundamental mode pulsators, we obtain radial velocity curves with amplitudes of $\sim$30--50 km s$^{-1}$ and effective temperature curves with 300--1,000 K variations, whereas for first-overtone pulsators these amplitudes are $\sim20$ km s$^{-1}$ and $\sim 600$ K, respectively. We use our sample to study the metallicity distribution of the halo and its dependence on Galactocentric distance ($R_{\rm GC}$). Using a radius-dependent mixture model, we split the data into chemodynamically distinct components and find that our inner halo sample ($R_{\rm GC}\lesssim50$ kpc) is predominantly composed of stars with [Fe/H] $\sim-1.5$ dex and largely radial orbits (with an anisotropy parameter $\beta\sim0.94$), that we associate with the Gaia-Sausage-Enceladus merger event. Stars in the outer halo field exhibit a broader and more metal-poor [Fe/H] distribution with more circular orbits ($\beta\sim0.39$). The metallicity gradient of the metal-rich and the metal-poor components is found to be $0.005$ and $0.010$ dex kpc$^{-1}$, respectively. Our catalog highlights DESI's tantalizing potential for studying the Milky Way and the pulsation properties of RR Lyrae stars in the era of large spectroscopic surveys.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS2003

Asymmetries and Variations in Jupiter's Magnetosphere

The investigation was carried out to infer the influence of solar wind on Jupiter's magnetosphere through studies of asymmetries and variations in the magnetosphere. We used the magnetic field observations from all of the pre-Galileo spacecraft and from the Galileo Prime and extended missions to understand asymmetries in magnetic field and various current systems in the magnetosphere.

Khurana, Krishan K.↗
NASA NTRS2014

On the Relationship Between Global Land-Ocean Temperature and Various Descriptors of Solar-Geomagnetic Activity and Climate

Examined are sunspot cycle- (SC-) length averages of the annual January-December values of the Global Land-Ocean Temperature Index ( ) in relation to SC-length averages of annual values of various descriptors of solar-geomagnetic activity and climate, incorporating lags of 0-5 yr. For the overall interval SC12-SC23, the is inferred to correlate best against the parameter incorporating lag = 5 yr, where the parameter refers to the resultant aa value having removed that portion of the annual aa average value due to the yearly variation of sunspot number (SSN). The inferred correlation between the and is statistically important at confidence level cl > 99.9%, having a coefficient of linear correlation r = 0.865 and standard error of estimate se = 0.149 degC. Excluding the most recent cycles SC22 and SC23, the inferred correlation is stronger, having r = 0.969 and se = 0.048 degC. With respect to the overall trend in the , which has been upwards towards warmer temperatures since SC12 (1878-1888), solar-geomagnetic activity parameters are now trending downwards (since SC19). For SC20-SC23, in contrast, comparison of the against SC-length averages of the annual value of the Mauna Loa carbon dioxide ( ) index is found to be highly statistically important (cl >> 99.9%), having r = 0.9994 and se = 0.012 degC for lag = 2 yr. On the basis of the inferred preferential linear correlation between the and , the current ongoing SC24 is inferred to have warmer than was seen in SC23 (i.e., >0.526 degC), probably in excess of 0.68 degC (relative to the 1951-1980 base period).

Wilson, Robert M.↗
DOE OSTI2023

When action is not least for systems with action-dependent Lagrangians

The dynamics of some non-conservative and dissipative systems can be derived by calculating the first variation of an action-dependent action according to the variational principle of Herglotz. This is directly analogous to the variational principle of Hamilton commonly used to derive the dynamics of conservative systems. In a similar fashion, just as the second variation of a conservative system’s action can be used to infer whether that system’s possible trajectories are dynamically stable, so too can the second variation of the action-dependent action be used to infer whether the possible trajectories of non-conservative and dissipative systems are dynamically stable. In this paper, I show, generalizing earlier analyses of the second variation of the action for conservative systems, how to calculate the second variation of the action-dependent action and how to apply it to two physically important systems: a time-independent harmonic oscillator and a time-dependent harmonic oscillator.

Physics↗