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At least 199 records · Page 11

NSRC makes vital vintage films accessible to today's weapons researchers

A few years ago, archivists at the Lab’s National Security Research Center (NSRC) rediscovered 65 special reels of nitrate motion picture film among the 20,000 film reels in the NSRC’s collections. Because nitrate film stock was discontinued in 1951, they realized that the films contained footage from the Lab’s earliest days of nuclear testing. However, nitrate film is highly toxic and flammable. Confirming this hunch would have to wait until the NSRC team devised a strategy for safely preserving and digitizing the reels. Now, after many months of planning and collaboration with LANL fire safety and industrial hygiene teams, the reels – which include footage from Operation Sandstone, Operation Ivy, and the Trinity test – have been digitized by the NSRC archivist team and are accessible to today’s researchers.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Synthetic Streamflow Datasets Derived from DOE 9505 for Select Texas Basins

This dataset is generated using a Bayesian Hidden Markov Model trained on the DOE 9505 streamflow projection ensemble. A set of 21,000 streamflow realizations are generated for the Colorado, Sabine, and Trinity river basins in Texas. Separate models are trained either using the full 9505 ensemble or a subset based on three hyperparameters: bias correction, downscaling, and hydrological model.

drought↗

ERTS data user investigation to develop a multistage forest sampling inventory system

The author has identified the following significant results. A unique digital timber volume estimation system was developed for use with the MSS CCT tapes. The system was tested on a 64-square mile area in Northern California's Trinity Alps. The outcome of a systematic experiment, in which several possible combinations of bands 5 and 7 and a contrast measure were tried, showed that an estimated gain in precision of 50% can be obtained in a multistage sampling design. The difference between bands 5 and 7 proved to be of special importance for the estimation of biomass in the form of timber volume. In addition, an interpretation model for high flight U2 photographs was developed. A maximum multiple correlation coefficient of 0.74 was obtained for the regression model, explaining 55% of the variation in timber volume as estimated from aerial photos and ground measurments. An interpretation model for MSS color composites is in the testing stage.

Langley, P. G.↗

Evaluation of usefulness of Skylab EREP S-190 and S-192 imagery in multistage forest surveys

The author has identified the following significant results. A unique digital timber volume estimation system with digital data for two ERTS-1 MSS bands was tested. The system was tested on a 64-square mile area in Northern California's Trinity Alps. The outcome of a systematic experiment in which possible combinations of the two bands (MSS 5 and 7) were tried, showed than an estimated gain in precision of 50% can be obtained in a multistage sampling design. Especially the difference between the two bands proved to be of major importance for the estimation of biomass in the form of timber volume. Identical tests as the one performed will be conducted with various S-192 bands when the digital data become available.

Langley, P. G.↗

Evaluation of usefulness of Skylab EREP S-190 and S-192 imagery in multistage forest surveys

The author has identified the following significant results. The digital timber volume prediction system was tested with another test area in the Trinity Alps. The estimated gain in precision was somewhat lower than the estimate for the first test area (35%). A combined interpretation of the two areas was made, yielding an estimated gain of 44%, with high statistical significance. This interpretation was used to calibrate the system for an interpretation of 43 primary sample units distributed over 1600 square miles. Preliminary results indicate that a gain of 35% can be realized over this large area in northern California.

Langley, P. G.↗

Space Shuttle radargrammetry results

Preliminary results on the radargrammetric processing of SIR-A and SIR-B data are presented. Radargrammetric processing was applied to images of the Trinity National Forest in Northern California, the islands of Cephalonia, Ithaka, and Sardegna, Mt. Shasta, and Cordon La Grasa, Argentina. The preliminary processing of the SIR-A and SIR-B data has produced digital elevation models, stereo models, and a contour map.

Leberl, F.↗

Autotrophic Ecosystems on the Early Earth

Ophiolite sequences, sections of lower oceanic crust and upper mantle that have been thrust onto continental craton, are located in northern and central California and provide easily accessible areas that serve as good analogs for similar, more extensive areas of the early Earth. We have begun investigating and characterizing these sites in order to understand better the processes that may be responsible for the water chemistry, mineralogy and biology of similar environments on the early Earth. The geophysical and geochemical processes in these terranes provide niches for unique communities of extremeophiles and likely provide a good analog to the location that first gave rise to life on Earth. The ophiolites found in northern and central California include the Trinity, Josephine, Coast Range and Point Sal, all of which are approximately 160 million years old. Fluids from serpentinizing springs are generally alkaline with high pH and H2 contents, indicating that the mafic rock compositions control the fluid composition through water-rock reactions during relatively low-grade hydrothermal processes. There are significant amounts of primary mineralogy remaining in the rocks, meaning that substantial alteration processes are still occurring in these terranes. The general reaction for serpentinization of olivine is given by one of the authors. olivine + H2O = serpentine + brucite + magnetite + H2. We have analyzed the mineralogical composition of several rock samples collected from the Coast Range Ophiolite near Clear Lake, CA by electron microprobe. The remnant primary mineralogy is fairly urnform in composition, with an olivine composition of Fo(sub 90), and with pyroxene compositions of En(sub 90) for orthopyroxene and En(sub 49)Wo(sub 48)Fs(sub 03) for the clinopyroxene. Other primary phases observed include chromites and other spinels. Examination of petrographic thin sections reveals that serpentinization reactions have occurred in these locations. The serpentine resulting from aqueous alteration of olivine resides in veins that are see to cross cut the primary mineral grains. There are several generations of alteration products, comprised mostly of serpentines that are magnesium rich, with magnetite, brucite and carbonates observed as accessory minerals. The formation of carbonates can be taken to indicate the presence of CO2 in the altering fluids. We collected samples from a spring in the Coast Range Ophiolite in order to determine whether the geochemical environment serves as a habitat for chemotrophic microorganisms. DNA was extracted from the sediment samples and the 16s rRNA gene was PCR amplified using universal Archaeal primers. Denaturing gradient gel electrophoresis (DGGE) was used to determine the community of Archaea thriving in these samples. Our results indicate that there were 8 different genera of Archaea from a single sample. A sequence was obtained from one of these eight. The sequence is of an organism similar to Halorubrum tibetense, and alkalophilic Archaeon. This result suggests that these environments are likely hosts for communities of organisms that are adapted for the unique chemistry provided by the alkaline spring.

Schulte, M.↗

Wrappers, Aspects, Quantification and Events

Talk overview: Object infrastructure framework (OIF). A system development to simplify building distributed applications by allowing independent implementation of multiple concern. Essence and state of AOP. Trinity. Quantification over events. Current work on a generalized AOP technology.

Filman, Robert E.↗

Behavioral Mapless Navigation Using Rings

This paper presents work on the development and implementation of a novel approach to robotic navigation. In this system, map-building and localization for obstacle avoidance are discarded in favor of moment-by-moment behavioral processing of the sonar sensor data. To accomplish this, we developed a network of behaviors that communicate through the passing of rings, data structures that are similar in form to the sonar data itself and express the decisions of each behavior. Through the use of these rings, behaviors can moderate each other, conflicting impulses can be mediated, and designers can easily connect modules to create complex emergent navigational techniques. We discuss the development of a number of these modules and their successful use as a navigation system in the Trinity omnidirectional robot.

Monroe, Randall P.↗

Phyllosilicate Transitions in Ferromagnesian Soils: Short-Range Order Materials and Smectites Dominate Secondary Phases

Analyses of X-ray diffraction (XRD) patterns taken by the CheMin instrument on the Curiosity Rover in Gale crater have documented the presence of clay minerals interpreted as smectites and a suite of amorphous to short-range order materials termed X-ray amorphous materials. These X-ray amorphous materials are commonly ironrich and aluminum poor and likely some of them are weathering products rather than primary glasses due to the presence of volatiles. Outstanding questions remain regarding the chemical composition and mineral structure of these X-ray amorphous materials and the smectites present at Gale crater and what they indicate about environmental conditions during their formation. To gain a better understanding of the mineral transitions that occur within ferromagnesian parent materials, we have investigated the development of secondary clay minerals and shortrange order materials in two soil chronosequences with varying climates developing on ultramafic bedrock. Field Sites: We investigated soil weathering within two field locations, the Klamath Mountains of Northern California, and the Tablelands of Newfoundland, Canada. Both sites possess age dated or correlated recently deglaciated soils and undated but substantially older soils. In the Klamath mountains the Trinity Ultramafic Body was deglaciated roughly 15,000 years bp while in the Tablelands a moraine was dated to about 17,600 years bp. The Klamath Mountains feature a seasonally wet and dry climate while the Tablelands are wet year-round with saturated soil conditions observed during sampling and standing water observed within 3 of 4 soil pit sampling locations.

Feldman, A. D.↗

Historic Manhattan Project Sites at Los Alamos

The Manhattan Project laboratory constructed at Los Alamos, New Mexico, beginning in 1943, was intended from the start to be temporary and to go up with amazing speed. Because most of those WWII-era facilities were built with minimal materials and so quickly, much of the original infrastructure was torn down in the late '40s and early '50s and replaced by more permanent facilities. However, a few key facilities remained, and are being preserved and maintained for historic significance. Four such sites are visited briefly in this video, taking viewers to V-Site, the buildings where the first nuclear explosive device was pre-assembled in preparation for the Trinity Test in Southern New Mexico. Included is another WWII area, Gun Site. So named because it was the area where scientists and engineers tested the so-called "gun method" of assembling nuclear materials -- the fundamental design of the Little Boy weapon that was eventually dropped on Hiroshima. The video also goes to Pajarito Site, home of the "Slotin Building" and "Pond Cabin." The Slotin Building is the place where scientist Louis Slotin conducted a criticality experiment that went awry in early 1946, leading to his unfortunate death, and the Pond Cabin served the team of eminent scientist Emilio Segre who did early chemistry work on plutonium that ultimately led to the Fat Man weapon.

99 GENERAL AND MISCELLANEOUS↗

PERTRAN: Genome-guided RNA-seq Read Assembler

As short RNA-seq reads become a standard, affordable input to any genome annotation project, a sensitive and accurate transcript assembler is an essential part of any gene prediction system. PERTRAN is a pipeline for assembling transcripts from RNA-seq reads which demonstrates higher sensitivity, with fewer fused exons (in most cases), and faster run times compared to other TOPHAT/CUFFLINKS and genome-guided Trinity. PERTRAN shows slightly lower specificity with increased gene fusions in some cases, discussed below. SAM files generated from PERTRAN can be used to compute expression level by cuffdiff and result is comparable to that from TOPHAT.

99 GENERAL AND MISCELLANEOUS↗

Quicksilver

Quicksilver is proxy application for the Monte Carlo Transport code, Mercury. The purpose of the Quicksilver mini-app is to create a freely distributable code base that represents the key elements of the Mercury workload by solving a simplified time-dependent neutron transport problem. As an open source code, Quicksilver will be hosted on the CZ git/stash repo alongside other mini-apps in the ACS so-design suite. It will be used by vendors and other partners for co-design activities such as identifying root causes of Mercury performance bottlenecks on future architectures (i.e., memory bandwidth, memory latency, flop intensity) and developing Quicksilver will be used within LLNL as a nimble platform to evaluate programming models, algorithms, etc. that might be useful in Mercury. Quicksilver may also become a replacement for MCB in future procurement benchmarks, as well as a way to engage vendors in the Trinity and Sierra Centers of Excellence as well as other co-design efforts.

Richards, David↗

Spatially-Resolved Characterization Techniques and Their Implications for Nuclear Debris Formation.

Debris from nuclear tests has a complex formation process and can inform multiple fields of study such as geology, atmospheric science, shock physics, and chemistry under extreme conditions. Macroscopic nuclear debris forms as the result of fireball interaction with surrounding materials (e.g., structural and environmental component), which rapidly undergo melting and vaporization followed by condensation, convective/diffusive mixing, and solidification over the course of seconds. In atmospheric events, some of this material may disperse over long distances, but much of the material is deposited close-in to ground zero, often in multicomponent, partially (or entirely) amorphous debris formations. During the U.S. nuclear testing program, this material was collected and analyzed, particularly for radionuclide composition. Fallout formation models were developed from nuclear test data based on such radionuclide compositional analyses. These models were not just used to understand fallout dispersion (i.e. the spread of radioactivity over geographical regions) but also guide radiochemical interpretations of historical nuclear tests.6 Developments in analytical techniques over the past several decades have made it possible to make new analyses on historical debris, some of which may be more than a half-century old. For example, inductively-coupled plasma mass spectrometry (ICP-MS) has been used to look at the trace elements in glassy fallout material from aboveground nuclear tests (including the Trinity test). Advanced analyses using X-ray absorption allowed for the measurement of oxidation state of fallout constituents, including actinides. The ability to measure trace actinides and their subsequent oxidation state is important to understanding how the surrounding environment may have influenced the resultant fallout composition and may have implications for why certain fractionation trends have been observed. Here we present data from historic nuclear test debris illustrating the power of spatially resolved methods to connect interaction of the near-field environment with the explosion and provide new insights into nuclear debris formation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Investigation of Portable Event-Based Monte Carlo Transport Using the NVIDIA Thrust Library

Power consumption considerations are driving future high performance computing platforms toward many-core computing architectures. Los Alamos National Laboratory's Trinity machine, available in 2016, will use both Intel Xeon Haswell processors and Intel Xeon Phi Knights Landing many integrated core (MIC) architecture coprocessors. Lawrence Livermore National Laboratory's Sierra machine, available in 2018, will use an IBM PowerPC architecture along with Nvidia graphics processing unit (GPU) architecture accelerators. These different advanced architectures make the computing landscape in upcoming years complex. Traditional approaches to Monte Carlo transport do not work efficiently on these new computing platforms. MIC architectures require vectorization to operate efficiently, and vectorization is difficult to achieve in Monte Carlo transport. GPU architectures require additional code to explicitly use the hardware, requiring significant code changes or hardware specific branches in the source code. A significant challenge for Monte Carlo transport projects is to simultaneously support within a single source code base efficient simulations for both the current generation of architectures and the different advanced computing architectures. In order to address these challenges, two important changes are typically required: a new algorithmic approach for solving Monte Carlo transport, and explicit use of hardware specific software. In this paper, we describe initial research investigations of an event-based Monte Carlo transport algorithm implemented using the Nvidia Thrust library on a GPU for a Monte Carlo test code. The event-based algorithm targets many-core architectures by increasing SIMD (single instruction multiple data) parallelism, while Thrust potentially provides portable performance by allowing one source code base to compile code targeted for both CPUs and GPUs. We described preliminary investigations of portable event-based Monte Carlo algorithms implemented using the Nvidia Thrust library in a research Monte Carlo test code. We found that an explicit CUDA implementation of an event-based Monte Carlo algorithm performed significantly more efficiently than a Thrust implementation on GPU platforms, most likely as a result of additional flexibility in access to different memory spaces on the GPU. Additionally, we showed that on GPU platforms and at large enough problem sizes the event-based implementations perform more efficiently than the serial history-based implementation running on the host CPU. While investigating this problem, we also discovered that the performance of the event-based algorithm is affected by what tallies are being used. A zonal scalar flux tally requires atomic operations that significantly impacted the performance of the code, in some cases producing slowdowns instead of speedups. We decided to remove the tally in order to focus on the effectiveness of the event-based algorithm. Future work will be required to research more effective ways of handling such tallies. Additionally, we would like to consider new ways for optimizing both the Thrust and CUDA versions, in order to see how much performance we have yet to achieve. The potential trade-off between portability and performance was demonstrated in this investigation. Thrust provides both CPU and GPU versions of the code in one code base, but it does so at a cost. We discovered approximately a factor of 2-5 performance difference between Thrust and CUDA on each GPU platform we tested. Thrust provides a tool to access the GPUs with less effort and specialization, but it does so by giving up fine grained control where extra performance can be found for this application. Future work will be required to determine whether this performance differential between Thrust and CUDA can be reduced for event-based Monte Carlo transport. (authors)

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Test facility for fission chamber assemblies - 239

The Institution -Project Center ITER- with participation of the National Research Nuclear University MEPhI are developing the neutron diagnostics -Divertor Neutron Flux Monitor- (DNFM) for the International Thermonuclear Experimental Reactor (ITER). This diagnostics shall ensure measurement of the total neutron yield and ITER fusion power. Assemblies of fission chambers (FC) with different fissile materials and sensitivities are planned to be used for the neutron flux measurement. Study of fission chambers characteristics and acceptance testing of the diagnostic system will be carried out at the testing facility of the neutronic laboratory of the 'TRINITI' Institute. The facility includes: compact powerful neutron generator with the power, control and monitoring system; remote handling system for FCs positioning and movement; novel three channels data acquisition and processing system. Each acquisition channel contains some measuring circuits with signal processing. This set of circuits provides neutron flux measurement in the range of at least 10 decades for each single FC. Data acquisition and processing system features are: signal digitizing with sample rate up to 125 MHz; real time data processing with computation and data update cycle from 0.1 ms. This paper examines the structure, composition and specification of the test facility. Application software, hardware solutions and the results of fission chambers prototypes tests are discussed. (authors)

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Algorithmic Improvements for Portable Event-Based Monte Carlo Transport Using the Nvidia Thrust Library

High performance computing environments are progressively moving towards many-core computing architectures. The Los Alamos National Laboratory Trinity machine, available in late 2016, will use both Intel Xeon Haswell processors and Intel Xeon Phi Knights Landing many integrated core (MIC) coprocessors. The Lawrence Livermore National Laboratory Sierra machine, available in 2018, will use an IBM PowerPC architecture along with Nvidia graphics processing units (GPUs). Applications that must work in this supercomputing environment must continue to adapt in order to take advantage of the diverse hardware architectures that are coming. A significant consideration is not only the performance of the application on a given platform but also the portability of the application to other platforms. The algorithmic improvements presented in this paper build upon recently-reported work on event-based Monte Carlo transport in the ALPSMC code that models particle transport in one-dimensional binary stochastic media. That paper discussed the lack of available vectorization in the traditional history-based algorithm used for Monte Carlo transport and presented a data parallel event-based algorithm implemented using the Nvidia Thrust library for portability. The performance of the data parallel event-based algorithm implemented using Thrust was compared to a native CUDA implementation. The conclusions from that work were that the Thrust library abstraction technique caused too significant a loss in performance but that the event-based method was a viable option that should be further investigated. In this paper, we describe algorithmic improvements to the data parallel event-based algorithm previously presented. We made further algorithmic optimizations to the event-based CUDA implementation, most notably: data structure changes, a new conditional particle removal scheme in the event-based process, and the use of multiple GPUs. In addition to improvements to the algorithm, we re-implemented the Thrust version from the now further optimized CUDA version, giving a greater chance for success at a performant abstraction. Finally, we revisited our previous assumptions about the inability of the history-based method to achieve performance on vector style architectures such as the MICs and GPUs, with surprising and promising results. (authors)

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

ZTF SN Ia DR2: An environmental study of Type Ia supernovae using host galaxy image decomposition

The second data release of Type Ia supernovae (SNe Ia) observed by the Zwicky Transient Facility has provided a homogeneous sample of 3628 SNe Ia with photometric and spectral information. This unprecedented sample size enables us to better explore our currently tentative understanding of the dependence of the host environment on SN Ia properties. In this paper, we make use of two-dimensional image decomposition to model the host galaxies of SNe Ia. We model elliptical galaxies as well as disc and spiral galaxies with or without central bulges and bars. This allows for the categorisation of SN Ia based on their morphological host environment, as well as the extraction of intrinsic galaxy properties corrected for both cosmological and atmospheric effects, through point-spread-function (PSF) convolution. We find that although this image decomposition technique leads to a significant bias towards elliptical galaxies in our final sample of processed galaxies, the overall results are still robust. By successfully modelling 728 host galaxies, we find that the photometric properties of SNe Ia found in discs and in elliptical galaxies correlate fundamentally differently with their host environment. We identified strong linear relations between light-curve stretch and our model-derived galaxy colour for both the elliptical (16.8σ) and disc (5.1σ) subpopulations of SNe Ia. Lower-stretch SNe Ia are found in redder environments, which we identify as an age and/or metallicity effect. Within the subpopulation of SNe Ia found in disc-containing galaxies, we find a significant linear trend (6.1σ) between light-curve stretch and model-derived local r-band surface brightness, which we link to the age and metallicity gradients found in disc galaxies. SN Ia colour shows little correlation with the host environment, as is seen in the literature. We do identify a possible dust effect in our model-derived surface brightness (3.3σ) for SNe Ia in disc galaxies.

79 ASTRONOMY AND ASTROPHYSICS↗