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At least 199 records · Page 11

You Can Run, But You Can't Hide Juniper Pollen Phenology and Dispersal

Pollen can be transported great distances. Van de Water et. al., 2003 reported Juniperus spp. pollen was transported 200-600 km. Hence local observations of plant phenology may not be consistent with the timing and source of pollen collected by pollen sampling instruments. The DREAM (Dust REgional Atmospheric Model, Nickovic et al. 2001) is a verified model for atmospheric dust transport modeling using MODIS data products to identify source regions and quantities of dust. We are modified the DREAM model to incorporate pollen transport. Pollen release is estimated based on MODIS derived phenology of Juniperus spp. communities. Ground based observational records of pollen release timing and quantities are used as verification. This information will be used to support the Centers for Disease Control and Prevention's National Environmental Public Health Tracking Program and the State of New Mexico environmental public health decision support for asthma and allergies alerts.

Luvall, Jeffrey C.↗

Climate Variability Drives Plankton Community Composition Changes: the 2010-2011 El Nino to La Nina Transition Around Australia

The strong La Nina of 2010-2011 provided an opportunity to investigate the ecological impacts of El Nino-Southern Oscillation on coastal plankton communities using the nine national reference stations around Australia. Based on remote sensing and across the entire Australian region 2011 (La Nina) was only modestly different from 2010 (El Nino) with the average temperature declining 0.2 percent surface chlorophyll a up 3 percent and modelled primary production down 14 percent. Other changes included a poleward shift in Prochlorococcus and Synechococcus. Along the east coast, there was a reduction in salinity, increase in nutrients, Chlorophytes and Prasinophytes (taxa with chlorophyll b, neoxanthin and prasinoxanthin). The southwest region had a rise in the proportion of 19-hexoyloxyfucoxanthin; possibly coccolithophorids in eddies of the Leeuwin Current and along the sub-tropical front. Pennate diatoms increased, Ceratium spp. decreased and Scrippsiella spp. increased in 2011. Zooplankton biomass declined significantly in 2011. There was a reduction in the abundance of Calocalanus pavo and Temora turbinata and increases in Clausocalanus farrani, Oncaea scottodicarloi and Macrosetella gracilis in 2011. The changes in the plankton community during the strong La Nina of 2011 suggest that this climatic oscillation exacerbates the tropicalization of Australia.

phytoplankton↗

The FIELDS Instrument Suite for Solar Probe Plus Measuring the Coronal Plasma and Magnetic Field, Plasma Waves and Turbulence, and Radio Signatures of Solar Transients

NASA's Solar Probe Plus (SPP) mission will make the first in situ measurements of the solar corona and the birthplace of the solar wind. The FIELDS instrument suite on SPP will make direct measurements of electric and magnetic fields, the properties of in situ plasma waves, electron density and temperature profiles, and interplanetary radio emissions, amongst other things. Here, we describe the scientific objectives targeted by the SPP/FIELDS instrument, the instrument design itself, and the instrument concept of operations and planned data products.

Solar Probe Plus↗

Coronal Imaging with the Solar Ultraviolet Imager

Coronal imaging capabilities of the Solar UltraViolet Imager (SUVI) on the Geostationary Operational Environmental Satellite-16 (GOES-16) are investigated. Launched in 2016, GOES-16 is stationed at 75.2 deg W longitude and accommodates both terrestrial and space weather instruments. SUVI is one of two instruments observing the Sun, providing solar images in six extreme ultraviolet (EUV) wavelengths: 94A, 131A, 171A, 195A, 284A and 304A. Mounted on a two axis gimballed Sun Pointed Platform (SPP), its 53 arc minute square field of view is nominally Sun-centered to provide high dynamic range images in all six wavelengths every four minutes. Analyses of on-orbit data indicated that SUVI had sufficient dynamic range and sensitivity in the 171A and 195A wavelengths to image the corona to the largest heights above the Sun to date while simultaneously imaging the Sun. The 1.6 megapixel Charge Coupled Device (CCD) detector enables the capture of the fine features of the corona. On-orbit calibration tests requiring movement of the SUVI line-of-sight off the Sun, demonstrated that the resulting dynamic disturbance didn't adversely impact the earth-pointing instrument performance. Combining these factors, we conducted a test to assess the performance of SUVI as an EUV extremely wide-field coronal imager by off-pointing the SPP around the Sun and synthesizing an image that's about 4 times the diameter of the Sun. The capability to perform coronal imaging at these two wavelengths is demonstrated by off-pointing the SUVI boresight to nine locations around the Sun and generating a composite coronal image that extends to approx. 4 solar radii. For this purpose, we exploited the satellite's ability to provide stable, fine pointing, even during the slews. Various exposure durations were considered during the first trial and a composite coronal image is obtained for each wavelength. The results are promising. The off-pointing locations and the exposure duration are being refined for the subsequent trials. The routine use of an ultraviolet solar imager as both an imager and a EUV coronagraph would be the first of its kind and is an exciting development. The on-orbit solar coronagraphs to date provide white light images with fields of view extending from 4-15 solar radii. Earlier, Seaton, et al investigated the evolution of the corona in EUV near the solar surface with the data from the Sun Watcher with Active Pixels and Image Processing (SWAP) EUV solar telescope on board the Project for On-Board Autonomy 2 (PROBA2). The presence of corona in EUV even to 4 solar radii is not known. The results of these experiments will begin to fill this void.

Tadikonda, Sivakumara K.↗

Coronal Imaging with the Solar Ultraviolet Imager

Coronal imaging capabilities of the Solar UltraViolet Imager (SUVI) on the Geostationary Operational Environmental Satellite-16 (GOES-16) are investigated. Launched in 2016, GOES-16 is stationed at 75.2 deg W longitude and accommodates both terrestrial and space weather instruments. SUVI is one of two instruments observing the Sun, providing solar images in six extreme ultraviolet (EUV) wavelengths: 94A, 131A, 171A, 195A, 284A and 304A. Mounted on a two axis gimballed Sun Pointed Platform (SPP), its 53 arcminute square field of view is nominally Sun-centered to provide high dynamic range images in all six wavelengths every four minutes. Analyses of on-orbit data indicated that SUVI had sufficient dynamic range and sensitivity in the 171A and 195A wavelengths to image the corona to the largest heights above the Sun to date while simultaneously imaging the Sun. The 1.6 megapixel Charge Coupled Device (CCD) detector enables the capture of the fine features of the corona. On-orbit calibration tests requiring movement of the SUVI line-of-sight off the Sun, demonstrated that the resulting dynamic disturbance didn't adversely impact the earth-pointing instrument performance. Combining these factors, we conducted a test to assess the performance of SUVI as an EUV extremely wide-field coronal imager by off-pointing the SPP around the Sun and synthesizing an image that's about 4 times the diameter of the Sun. The capability to perform coronal imaging at these two wavelengths is demonstrated by off-pointing the SUVI boresight to nine locations around the Sun and generating a composite coronal image that extends to approx. 4 solar radii. For this purpose, we exploited the satellite's ability to provide stable, fine pointing, even during the slews. Various exposure durations were considered during the first trial and a composite coronal image is obtained for each wavelength. The results are promising. The off-pointing locations and the exposure duration are being refined for the subsequent trials. The routine use of an ultraviolet solar imager as both an imager and a EUV coronagraph would be the first of its kind and is an exciting development. The on-orbit solar coronagraphs to date provide white light images with fields of view extending from 4-15 solar radii. Earlier, Seaton, et al investigated the evolution of the corona in EUV near the solar surface with the data from the Sun Watcher with Active Pixels and Image Processing (SWAP) EUV solar telescope on board the Project for On-Board Autonomy 2 (PROBA2). The presence of corona in EUV even to 4 solar radii is not known. The results of these experiments will begin to fill this void.

Tadikonda, Sivakumara K.↗

Mapping tall shrub biomass in Alaska at landscape scale using structure-from-motion photogrammetry and lidar

Warming in arctic and boreal regions is increasing shrub cover and biomass. In southcentral Alaska, willow (Salix spp.) and alder (Alnus spp.) shrubs grow taller than many tree species and account for a substantial proportion of aboveground biomass, yet they are not individually measured as part of the operational Forest Inventory and Analysis (FIA) Program. The goal of this research was to test methods for landscape-scale mapping of tall shrub biomass in upper montane and subalpine environments using FIA-type plot measurements (n = 51) and predictor variables from imagery-based structure-from-motion (SfM) and airborne lidar. Specifically, we compared biomass models constructed from imagery acquired by unmanned aerial vehicle (UAV; ~1.7 cm pixels), imagery from the NASA Goddard's Lidar, Hyperspectral, and Thermal Airborne Imager (G-LiHT; ~3.1 cm pixels), and concomitant G-LiHT small-footprint lidar. Tall shrub biomass was most accurately predicted at 5 m resolution (R^2 = 0.81, RMSE = 1.09 kg/sq. m) using G-LiHT SfM color and structure variables. Lidar-only models had lower precision (R^2 = 0.74, RMSE = 1.26 kg/sq. m), possibly due to reduced model information content from variable multicollinearity or lower data density. Separate models for upper montane zones with trees and shrubs and subalpine zones with only shrubs were always chosen over single models based on minimization of Akaike's Information Criterion, indicating the need for variable sets robust to overhanging tree canopy. Decreasing point density from UAV (5000–8000 pts./sq. m) to the G-LiHT SfM point cloud (500–2000 pts./sq. m) had little impact on model fit, suggesting that high-resolution airborne imagery can extend SfM approaches well beyond line-of-sight restrictions for UAV platforms. Overall, our results confirmed that SfM from high-resolution imagery is a viable approach to estimate shrub biomass in the boreal region, especially when an existing lidar terrain model and local field calibration data are available to quantify uncertainty in the SfM point cloud and landscape-scale estimates of shrub biomass.

Michael Alonzo↗

Leaf-level chlorophyll fluorescence and reflectance spectra of high latitude plants

Little is known about the chlorophyll fluorescence spectra for high latitude plants. A FluoWat leaf clip was used to measure leaf-level reflectance and chlorophyll fluorescence spectra of leaves of common high latitude plants to examine general spectral characteristics of these species. Fluorescence yield (Fyield) was calculated as the ratio of the emitted fluorescence divided by the absorbed radiation for the wavelengths from 400 nm up to the wavelength of the cut-off for the FluoWat low pass filter (either 650 or 700 nm). The Fyield spectra grouped into distinctly different patterns among different plant functional types. Black spruce (Picea mariana) Fyield spectra had little red fluorescence, which was reabsorbed in the shoot, but displayed a distinct far-red peak. Quaking aspen (Populus tremuloides) had both high red and far-red Fyield peaks, as did sweet coltsfoot (Petasites frigidus). Cotton grass (Eriophorum spp.) had both red and far-red Fyield peaks, but these peaks were much lower than for aspen or coltsfoot. Sphagnum moss (Sphagnum spp.) had a distinct Fyield red peak but low far-red fluorescence. Reindeer moss lichen (Cladonia rangiferina) had very low fluorescence levels, although when damp displayed a small red Fyield peak. These high latitude vegetation samples showed wide variations in Fyield spectral shapes. The Fyield values for the individual red or far-red peaks were poorly correlated to chlorophyll content, however the ratio of far-red to red Fyield showed a strong correlation with chlorophyll content. The spectral variability of these plants may provide information for remote sensing of vegetation type but may also confound attempts to measure high latitude vegetation biophysical characteristics and function using solar induced fluorescence (SIF).

K Fred Huemmrich↗

Examining the Effects of 4He Exposure on the Gut-Brain Axis

Beyond low earth orbit, space radiation poses significant risks to astronaut health. Previous studies have shown that the microbial composition of the gastrointestinal (GI) microbiome changes upon exposure to high linear energy transfer radiation. Interestingly, radiation-induced shifts in GI microbiota composition are linked to various neuropsychological disorders. Herein, we aimed to study changes in GI microbiota and behaviors of rats exposed to whole-body radiation (0, 5, or 25 cGy 4 He, 250 MeV/n) at approximately 6 months of age. Fecal samples were collected 24 hours prior to 4 He radiation and 24 hours and 7 days post-exposure for quantitative PCR analyses to assess fecal levels of spore-forming bacteria (SFB), Bifidobacterium, Lactobacillus, and Akkermansia. Rats were also tested in the social odor recognition memory (SORM) test at 7 days following 4 He exposure. A subset of rats was euthanized 90 minutes following completion of the SORM test, and GI tissue from small intestine to colon were prepared for examining overall histological changes and immunohistochemical staining for serotonin (5-HT). No notable pathological changes were observed in GI tissues. Akkermansia spp. and SFB were significantly decreased the 25 cGy group at 24 hours and 7 days post-exposure compared to pre-exposure, respectively. Bifidobacterium and Lactobacillus spp. showed no significant changes. 5-HT production was significantly higher in the proximal small intestine and the cecum in the 25 cGy group compared to the sham group. The 25 cGy group exhibited deficits in recognition in SORM testing at 7 days post-exposure. Taken together, these results suggest a connection between GI microbiome 3 composition, serotonin production, and neurobehavioral performance, and that this connection may be disrupted upon exposure to 25 cGy of 4 He ions

Carli B Jones↗

Decarbonization of the power sector with CCS: Case study in two regions in the U.S. and lessons for Latin America

This work consists of estimates of potential changes in the total systems cost (TSC) of two RTOs of the United States (U.S.), MISO-N and SPP RTO West, under the traditional decarbonization pathway of replacement of fossil-power plants with variable renewable energy (VRE) and the less traditional pathway of retrofitting fossil fuel units with carbon capture and storage (CCS). Although the power mixes of MISO-N and SPP RTO West are particular to these regions, results can apply to other regions, including Latin American countries that are planning to decarbonize their power sectors. This case study serves to highlight lessons on differences in technology costs between these two pathways, as well as the cost associated with decarbonization rates close to 100%.

Pena-Cabra, Ivonne A.↗

Decarbonization of the power sector with CCS: Case study in two regions in the U.S. and lessons for Latin America

This paper estimates potential changes in the total systems cost (TSC) of two RTOs of the United States (U.S.), MISO-N and SPP RTO West, under the traditional decarbonization pathway of replacement of fossil-power plants with variable renewable energy (VRE) and the less traditional pathway of retrofitting fossil fuel units with carbon capture and storage (CCS). Although the power mixes of MISO-N and SPP RTO West are particular to those regions, the results can apply to other regions, including Latin American countries that are planning to decarbonize their power sectors. This case study serves to highlight lessons on the difference of technology costs between these two pathways, as well as the cost associated with decarbonization rates close to 100%.

Pena-Cabra, Ivonne A.↗

Briefing Human Reliability Analysis Tasks in the KINS-INL Project

Under the SPP with Korea Institute of Nuclear Safety (KINS) (SPP No. 24SP91), INL research team has a plan to visit KINS on December 3, 2024 and have a project meeting with KINS in-person. INL researchers will give this presentation about what we have done on Task 2 under the contract as below. Task 2: Support KINS in the treatment of human actions. INL efforts consist of: Provide technical expertise on recovery analysis based on INL’s methods or recent research Provide technical expertise on dependency analysis based on INL’s methods or recent research Provide technical expertise on analyzing the effects of HSI degradation on operator actions

99 - GENERAL AND MISCELLANEOUS↗

CO 2 supplementation eliminates sugar-rich media requirement for plant propagation using a simple inexpensive temporary immersion photobioreactor

In vitro plant propagation systems such as temporary immersion bioreactors (TIBs) are valuable tools that enable production of disease-free plants with improved traits. However, TIB systems can be expensive, difficult to implement, and prone to contamination due to sugar rich propagation media. Using rapidly growing chicory root cultures to expedite design-build-test cycles, we report here an improved, low-cost version of a previously reported Hydrostatically-driven TIB (Hy-TIB) that facilitates economical use of gas mixtures. Bioreactor improvements include decreased material costs, expanded modes of operation, and a horizontal orientation of a plastic film plant growth chambers that increase propagule light exposure. To take advantage of these improvements, we describe here experiments that evaluate the impacts of elevated CO 2 on propagation of cacao (Theobroma cacao) secondary embryos and nodal cultures of yam (Dioscorea spp.) during both phototrophic and photomixotrophic growth. Our experiments show that elevated CO 2 during plant propagation significantly improved both cacao and yam propagule development and eliminated the need for supplemental sugars in tissue culture growth media. Thus, our improved Hy-TIB shows potential as a simple, low-cost, and scalable propagation platform with cost-effective gas composition control and reduced risk of contamination overgrowth. We provide detailed instructions for assembly of this Hy-TIB design and discuss the implications of its adoption in food-insecure regions of the world.

59 BASIC BIOLOGICAL SCIENCES↗

Materials Characterization: A Primer for Solid Phase Processing Applications

The Pacific Northwest National Laboratory (PNNL) undertook the Materials Characterization, Prediction, and Control (MCPC) Laboratory Directed Research and Development (LDRD) Project to advance understanding of nuclear material processing and enable multifold acceleration in the development and qualification of new material systems produced via advanced manufacturing methods, such as solid phase processing, for use in national security and advanced energy applications (Smith 2021). As a two-year LDRD investment requiring focused research, the MCPC project applied only a subset of the wide range of available destructive and nondestructive characterization methods to provide data to the predictive modeling and data analytics tasks. The purpose of this report is to review a wide range of destructive and nondestructive characterization methods that are relevant in solid-phase processing (SPP) applications, but not necessarily applied in the MCPC Project as a guide to the planning of characterization activities in future research. Particular attention is given to measured characteristics that can correlate to other material characteristics, with a particular interest in nondestructive evaluation (NDE) that can be applied to samples obtained in the MCPC Project. Destructive examinations include tensile tests, optical and electron microscopy, micro-hardness, and residual stress tests. NDE tests include surface visual inspection, eddy current examination for cracks, 4-point potential drop, ultrasound, x-ray, and computed tomography.

36 MATERIALS SCIENCE↗

ARPA-E PERFORM datasets

Time-coincident load, wind, and solar data including actual and probabilistic forecast datasets at 5-min resolution for ERCOT, MISO, NYISO, and SPP. Wind and solar profiles are supplied for existing sites as well as planned sites based on interconnection queue projects as of 2021. For ERCOT actuals are provided for 2017 and 2018 and forecasts for 2018, and for the remaining ISOs actuals are provided for 2018 and 2019 and forecasts for 2019. There datasets were produced by NREL as part of the ARPA-E PERFORM project, an ARPA-E funded program that aim to use time-coincident power and load seeks to develop innovative management systems that represent the relative delivery risk of each asset and balance the collective risk of all assets across the grid. For more information on the datasets and methods used to generate them see https://github.com/PERFORM-Forecasts/documentation.

5-min data↗

The Near-Gapless Penicillium fuscoglaucum Genome Enables the Discovery of Lifestyle Features as an Emerging Post-Harvest Phytopathogen

Penicillium spp. occupy many diverse biological niches that include plant pathogens, opportunistic human pathogens, saprophytes, indoor air contaminants, and those selected specifically for industrial applications to produce secondary metabolites and lifesaving antibiotics. Recent phylogenetic studies have established Penicillium fuscoglaucum as a synonym for Penicillium commune, which is an indoor air contaminant and toxin producer and can infect apple fruit during storage. During routine culturing on selective media in the lab, we obtained an isolate of P. fuscoglaucum Pf_T2 and sequenced its genome. The Pf_T2 genome is far superior to available genomic resources for the species. Our assembly exhibits a length of 35.1 Mb, a BUSCO score of 97.9% complete, and consists of five scaffolds/contigs representing the four expected chromosomes. It was determined that the Pf_T2 genome was colinear with a type specimen P. fuscoglaucum and contained a lineage-specific, intact cyclopiazonic acid (CPA) gene cluster. For comparison, a highly virulent postharvest apple pathogen, P. expansum strain TDL 12.1, was included and showed a similar growth pattern in culture to our Pf_T2 isolate but was far more aggressive in apple fruit than P. fuscoglaucum. The genome of Pf_T2 serves as a major improvement over existing resources, has superior annotation, and can inform forthcoming omics-based work and functional genetic studies to probe secondary metabolite production and disparities in aggressiveness during apple fruit decay.

59 BASIC BIOLOGICAL SCIENCES↗

Unveiling the Arsenal of Apple Bitter Rot Fungi: Comparative Genomics Identifies Candidate Effectors, CAZymes, and Biosynthetic Gene Clusters in Colletotrichum Species

The bitter rot of apple is caused by Colletotrichum spp. and is a serious pre-harvest disease that can manifest in postharvest losses on harvested fruit. In this study, we obtained genome sequences from four different species, C. chrysophilum, C. noveboracense, C. nupharicola, and C. fioriniae, that infect apple and cause diseases on other fruits, vegetables, and flowers. Our genomic data were obtained from isolates/species that have not yet been sequenced and represent geographic-specific regions. Genome sequencing allowed for the construction of phylogenetic trees, which corroborated the overall concordance observed in prior MLST studies. Bioinformatic pipelines were used to discover CAZyme, effector, and secondary metabolic (SM) gene clusters in all nine Colletotrichum isolates. We found redundancy and a high level of similarity across species regarding CAZyme classes and predicted cytoplastic and apoplastic effectors. SM gene clusters displayed the most diversity in type and the most common cluster was one that encodes genes involved in the production of alternapyrone. Our study provides a solid platform to identify targets for functional studies that underpin pathogenicity, virulence, and/or quiescence that can be targeted for the development of new control strategies. With these new genomics resources, exploration via omics-based technologies using these isolates will help ascertain the biological underpinnings of their widespread success and observed geographic dominance in specific areas throughout the country.

59 BASIC BIOLOGICAL SCIENCES↗

Hybrid Plasmonic Coupled‐Mode Metasurface Design for Shot‐Noise Limited Ppb‐Level Hydrogen Detection

Plasmonic hydrogen sensors have enabled hydrogen detection below parts-per-million (ppm) range by boosting the sensitivity using localized surface plasmonic resonant (LSPR) structures. However, the intrinsic optical losses of Palladium (Pd), the primary plasmonic metal used for hydrogen detection, result in a low quality (Q) factor LSPR, which fundamentally hinders further improvement. In this work, a hybrid plasmonic metasurface is proposed that couples Pd-based LSPR structure with an Au film supporting surface plasmon polariton mode (Au-SPP). The coupled near-perfect absorber resonance yields a spectrally narrow, high Q response that retains strong sensitivity to hydrogen while improving resonance localization. Numerical analysis shows that, under shot-noise-limited conditions, the limit of detection (LoD) can be improved by over threefold compared to the state-of-the-art designs. Furthermore, this hybrid plasmonic coupled-mode metasurface thus presents a promising pathway to achieve parts-per-billion-level (ppb-level) hydrogen detection with enhanced spectral precision and robustness.

coupled modes↗

Disturbance-accelerated succession increases the production of a temperate forest

Many secondary deciduous forests of eastern North America are approaching a transition in which maturing early successional tree species are declining, resulting in an uncertain future for these forests’ century-long carbon (C) sink. We initiated the Forest Accelerated Succession Experiment (FASET) at the University of Michigan Biological Station to examine the patterns and mechanisms underlying forest C cycling following the stem-girdling induced mortality of >6,700 early successional Populus spp. (aspen) and Betula papyrifera (paper birch). Since 2008, meteorological flux tower-based C cycling observations from the 33-ha treatment forest have been paired with those from a nearby unmanipulated forest. Following over a decade of observations, herein we revisit our core hypothesis: that net ecosystem production (NEP) would increase following the transition to mid-late successional species dominance due to increased canopy structural complexity. Supporting our hypothesis, NEP was stable, briefly declined, and then increased relative to the control in the decade following disturbance; however, increasing NEP was not associated with rising structural complexity but rather the rapid 1-year recovery of total LAI as mid-late successional Acer, Quercus, and Pinus assumed canopy dominance. The transition to mid-late successional species dominance improved carbon-use efficiency (CUE = NEP/gross primary production) as ecosystem respiration declined. Similar soil respiration rates in control and treatment forests, along with species differences in leaf physiology and the rising relative growth rates of mid-late successional species in the treatment forest, suggest changes in aboveground plant respiration and growth, respectively, were primarily responsible for increases in NEP. We conclude that deciduous forests transitioning from early to middle succession are capable of sustained or increased NEP, even when experiencing extensive tree mortality. This adds to mounting evidence that aging deciduous forests in the region will function as C sinks for decades to come.

54 ENVIRONMENTAL SCIENCES↗