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At least 199 records · Page 11

Contingency rules for pathogen competition and antagonism in a genetically based, plant defense hierarchy

Abstract Plant defense against pathogens includes a range of mechanisms, including, but not limited to, genetic resistance, pathogen‐antagonizing endophytes, and pathogen competitors. The relative importance of each mechanism can be expressed in a hierarchical view of defense. Several recent studies have shown that pathogen antagonism is inconsistently expressed within the plant defense hierarchy. Our hypothesis is that the hierarchy is governed by contingency rules that determine when and where antagonists reduce plant disease severity. Here, we investigated whether pathogen competition influences pathogen antagonism using Populus as a model system. In three independent field experiments, we asked whether competition for leaf mesophyll cells between a Melampsora rust pathogen and a microscopic, eriophyid mite affects rust pathogen antagonism by fungal leaf endophytes. The rust pathogen has an annual, phenological disadvantage in competition with the mite because the rust pathogen must infect its secondary host in spring before infecting Populus . We varied mite–rust competition by utilizing Populus genotypes characterized by differential genetic resistance to the two organisms. We inoculated plants with endophytes and allowed mites and rust to infect plants naturally. Two contingency rules emerged from the three field experiments: (a) Pathogen antagonism by endophytes can be preempted by host genes for resistance that suppress pathogen development, and (b) pathogen antagonism by endophytes can secondarily be preempted by competitive exclusion of the rust by the mite. Synthesis : Our results point to a Populus defense hierarchy with resistance genes on top, followed by pathogen competition, and finally pathogen antagonism by endophytes. We expect these rules will help to explain the variation in pathogen antagonism that is currently attributed to context dependency.

59 BASIC BIOLOGICAL SCIENCES↗

Impact on quality activities of measurement systems meeting an L:1 rule

This study considers the impact of a measurement system that meets an L:1 rule on various quality activities. These activities include inspection, acceptance sampling, and control charting. A measurement system that meets a 10:1 rule performs much better than one that meets a 4:1 rule. R code is provided so that the practitioner is able to evaluate these activities to his or her particular situation.

97 MATHEMATICS AND COMPUTING↗

Multi-Higgs doublet models: the Higgs-fermion couplings and their sum rules

This is the second of a series of papers that explores the physical parameterization, sum rules and unitarity bounds arising from a non-minimal scalar sector of the Standard Model (SM) that consists of N Higgs doublets. In this paper, we focus on the structure and implication of the Yukawa interactions that couple the N scalar doublets to the SM fermions. We employ the charged Higgs basis, which is defined as the basis of scalar fields such that the neutral scalar field vacuum expectation value resides entirely in one of the N scalar doublet fields, and the charged components of the remaining N – 1 scalar doublet fields are the physical (mass-eigenstate) charged Higgs fields. Based on the structure of the Yukawa Lagrangian of the model (and as a consequence of tree-level unitarity), one may deduce numerous sum rules, several of which have not appeared previously in the literature. Furthermore, these sum rules can be used to uncover intimate relations between the structure of the Higgs-fermion couplings and the scalar/gauge couplings. In particular, we show that the approximate alignment limit, in which the W + W – and ZZ couplings to the observed Higgs boson are approximately SM-like, imposes significant constraints on the Higgs-fermion couplings.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Data-driven discovery of a formation prediction rule on high-entropy ceramics

The interest in high entropy ceramics (HECs) has increased steadily due to their superior properties. However, the prediction of their formation still poses challenges for the discovery of new systems. Here, we discover a rational rule for designing single-phase high entropy metal diborides (HEBs) using data-driven approach. The machine learning (ML) model is trained on data collected via high-throughput experiments (HTEs). K nearest neighbor (KNN) model shows an experimental validation accuracy of 93.75%. By implementing interpretable ML method, we demonstrate that a mismatch of the bonds between boron and transition metals (δ B-TM ) dominates the formation of HEBs. We propose an empirical rule that HEBs favor forming a single phase when δ B-TM < 3.66; otherwise, multiphase. The rule has a high accuracy of 93.33% for new HEBs predictions. In addition, we contribute 165 high quality HEBs data in total, which can promote the development of materials informatics in HEBs. Furthermore, this data-driven strategy can be expanded to accelerate the search for new HECs, paving a pathway to design novel HECs with superior properties rapidly.

36 MATERIALS SCIENCE↗

Crowdsourced reliable labeling of safety-rule violations on images of complex construction scenes for advanced vision-based workplace safety

Construction workplace hazard detection requires engineers to analyze scenes manually against many safety rules, which is time-consuming, labor-intensive, and error-prone. Computer vision algorithms are yet to achieve reliable discrimination of anomalous and benign object relations underpinning safety violation detections. Recently developed deep learning-based computer vision algorithms need tens of thousands of images, including labels of the safety rules violated, in order to train deep-learning networks for acquiring spatiotemporal reasoning capacity in complex workplaces. Such training processes need human experts to label images and indicate whether the relationship between the worker, resource, and equipment in the scenes violate spatiotemporal arrangement rules for safe and productive operations. False alarms in those manual labels (labeling no-violation images as having violations) can significantly mislead the machine learning process and result in computer vision models that produce inaccurate hazard detections. Compared with false alarms, another type of mislabels, false negatives (labeling images having violations as “no violations”), seem to have fewer impacts on the reliability of the trained computer vision models.

97 MATHEMATICS AND COMPUTING↗

A derivation of Born’s rule from symmetry

Highlights: • A very simple proof for the rule by which we calculate probabilities in quantum mechanics. We here put forward a simple argument for Born’s rule based on the requirement that transition probabilities in quantum mechanics should not be a function of the number of degrees of freedom in the system, or the dimension of the Hilbert-space, respectively. The argument presented here can be interpreted as deriving Born’s rule from a symmetry requirement.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

An asymptotically compatible meshfree quadrature rule for nonlocal problems with applications to peridynamics

In this paper, we present a meshfree quadrature rule for compactly supported nonlocal integro-differential equations (IDEs) with radial kernels. We apply this rule to develop a meshfree discretization of a peridynamic solid mechanics model that requires no background mesh. Existing discretizations of peridynamic models have been shown to exhibit a lack of asymptotic compatibility to the corresponding linearly elastic local solution. By posing the quadrature rule as an equality constrained least squares problem, we obtain asymptotically compatible convergence by introducing polynomial reproduction constraints. Our approach naturally handles traction-free conditions, surface effects, and damage modeling for both static and dynamic problems. We demonstrate high-order convergence to the local theory by comparing to manufactured solutions and to cases with crack singularities for which an analytic solution is available. We verify the applicability of the approach to realistic problems by reproducing high-velocity impact results from the Kalthoff–Winkler experiments.

42 ENGINEERING↗

Comparative Analysis of Model Predictive Control and MPC-Informed Rule-Based Control for Thermal Storage Operation in Ultra-Low Temperature 4th Generation District Heating Networks

The integration of thermal storage and heat pumps in district heating networks (DHNs) can significantly enhance operational flexibility and energy efficiency; however, the practical deployment of advanced control strategies is often hindered by forecasting requirements and computational complexity. This study presents a comparative analysis of thermal storage control strategies in an ultra-low-temperature fourth-generation DHN, focusing on the development of a simplified rule-based control (RBC) explicitly informed by Model Predictive Control (MPC) behavior. The proposed methodology systematically analyzes the charging and discharging decisions of an MPC-controlled system under ideal forecasting conditions and extracts recurrent control patterns as a function of key system variables, including outdoor temperature, thermal demand, and electricity price. These patterns are translated into a set of structured time- and condition-based rules, resulting in an MPC-informed RBC that embeds predictive insights while preserving implementation simplicity and operational transparency. The approach is validated on a realistic mixed-use urban district in Denver, Colorado, USA, equipped with a centralized air-source heat pump, distributed water-to-water heat pumps, and a central thermal storage unit. Results show that the tuned RBC attains approximately 96% of ideal MPC economic performance (-27% of costs), preserves values of technical and environmental indicators (reduction only of 2-3%), and substantially reduces complexity. Sensitivity analyses further demonstrate the robustness of the RBC under varying operational conditions (i.e., ambient temperature, electricity price). Overall, the study demonstrates that MPC-informed rule-based control represents an effective trade-off between control performance and real-world applicability, enabling the integration of additional system components while maintaining simplicity, robustness, and ease of implementation.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Impact of operating reserve rules on electricity prices with high penetrations of renewable energy

In competitive wholesale electricity markets, significant effort is devoted to designing markets that set efficient prices for maintaining supply-demand balance. One factor that can impact prices is administratively-set scarcity pricing, which sets prices to a preset level when the market is not able to meet operating reserve or energy requirements. When energy and operating reserves are co-optimized, assumptions surrounding operating reserve requirements and scarcity pricing can impact system-wide price outcomes for both operating reserves and energy. This study uses production cost modeling of an ERCOT-like system to evaluate the impact of operating reserve eligibility, scarcity pricing, and quantity rules on electricity prices, and therefore also on generator revenues. Results reveal economic and operational benefits with allowing open participation in reserve markets, as this enables greater access to the full set of capable resources at lowest cost. Furthermore, both energy and reserve prices are strongly impacted by reserve scarcity pricing events, which reveals that reserve scarcity pricing assumptions can impact price outcomes even for units not providing reserves. This study highlights the importance of operating reserve scarcity pricing rules because of the strong coupling between energy and reserve prices and because these rules serve as proxies for true price responsive demand.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Studying nuclear medium modification using the Gerasimov-Drell-Hearn sum rule

The Gerasimov–Drell–Hearn sum rule is a generic relation that has been used to make significant contributions to research in hadronic physics. It connects the spin-dependent cross-section for photoproduction off a particle to the squared ratio of the particle’s anomalous magnetic moment and its mass, (κ/M)2. Thus, for a nucleon embedded in a nucleus, the sum rule relates the cross-section to κ/M averaged quadratically over the nucleons comprising the nucleus. This quadratic averaging can be used to constrain the mechanism responsible for the medium modification of the nucleon. We also point out that the global properties of the embedded nucleon like its axial charge, mass or magnetic moment are observables measurable through sum rules.

Deur, A. [Thomas Jefferson National Accelerator Fa↗

Pauling's rules for oxide surfaces

Determination of surface structures currently requires careful measurement and computationally expensive methods since, unlike bulk crystals, guiding principles for generating surface structural hypotheses are frequently lacking. In this work, we discuss the applicability of Pauling's rules as a set of guidelines for surface structures. The wealth of solved reconstructions on SrTiO 3 (100), (110), and (111) are considered, as well as nanostructures on these surfaces and a few other ABO 3 oxide materials. These rules are found to explain atomic arrangements for reconstructions and thin films just as they apply to bulk oxide materials. Lastly, using this data and Pauling's rules, the fundamental structural units of reconstructions and their arrangement are discussed.

36 MATERIALS SCIENCE↗

A procedure for rule extraction from a Self-Organising plasma disruption predictor for JET

In a previous paper, a Self-Organizing Map had proven to be able to identify the regions of the plasma operative space characterizing the pre-disruptive phase at JET without relying on any a priori information. One of the strengths of this disruption predictor lies in its inherent self-organization capability. The Self-Organizing Map discovers non-trivial relationships and captures the complicated interplay of device diagnostics on the internal plasma states directly from the experimental data. Moreover, the provided model allows the visualization of high-dimensional plasma parameters and facilitates easy interrogation of the model to understand the reasons behind its correlations. In this paper, an additional step is taken towards the interpretability of models for predicting disruptions by training a Decision Tree to classify the plasma states according to the interpretation provided by the Self-Organizing Map (stable or at high risk of disruptions). The Decision tree provides a set of rules which describe the transition of the plasma towards the pre-disruptive phase as visualized in the Self-Organizing Map. The obtained rules for the database explored in the study identify four regions in the map, two of which are at risk of disruption. These regions correspond to partitions of a 3D space based on the peaking factors of the core and divertor radiation, as well as the Locked Mode. The agreement between the Self-Organizing Map answers and the rules supplied by the Decision Tree is confirmed by the comparison of the performance exhibited by the two models in the prediction of disruptions.

Setzu, Samuele [Univ. of Cagliari, Monserrato, Cag↗

Non-Condon nonequilibrium Fermi’s golden rule rates from the linearized semiclassical method

The nonequilibrium Fermi’s golden rule describes the transition between a photoexcited bright donor electronic state and a dark acceptor electronic state, when the nuclear degrees of freedom start out in a nonequilibrium state. In a previous paper [X. Sun and E. Geva, J. Chem. Theory Comput. 12, 2926 (2016)], we proposed a new expression for the nonequilibrium Fermi’s golden rule within the framework of the linearized semiclassical approximation and based on the Condon approximation, according to which the electronic coupling between donor and acceptor is assumed constant. In this paper we propose a more general expression, which is applicable to the case of non-Condon electronic coupling. We test the accuracy of the new non-Condon nonequilibrium Fermi’s golden rule linearized semiclassical expression on a model where the donor and acceptor potential energy surfaces are parabolic and identical except for shifts in the equilibrium energy and geometry, and the coupling between them is linear in the nuclear coordinates. Since non-Condon effects may or may not give rise to conical intersections, both possibilities are examined by considering the following: (1) A modified Garg-Onuchic-Ambegaokar model for charge transfer in the condensed phase, where the donor-acceptor coupling is linear in the primary-mode coordinate, and for which non-Condon effects do not give rise to a conical intersection; (2) the linear vibronic coupling model for electronic transitions in gas phase molecules, where non-Condon effects give rise to conical intersections. We also present a comprehensive comparison between the linearized semiclassical expression and a progression of more approximate expressions, in both normal and inverted regions, and over a wide range of initial nonequilibrium states, temperatures, and frictions.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Violation of the Cauchy–Born rule in multi-principal element alloys

Multi-principal element alloys are a novel class of materials that are formed by combining multiple elements in high concentrations and show exceptional properties compared to conventional alloys. These alloys have high configurational entropy due to inherent atomic disorder. The Cauchy–Born rule is a popular homogenization method for linking atomistic to continuum length scales. In this Letter, we use ab initio density functional theory calculations to report that the Cauchy–Born rule, which holds in conventional alloys in the absence of defects, is not valid in multi-principal element alloys. Further, the violation of the Cauchy–Born rule in these alloys is attributed to the presence of atomic disorder due to which the deformations are inhomogeneous. Our results also show the deviations in deformation are related to the magnitude of the stretch and shear by power laws.

36 MATERIALS SCIENCE↗

Exact sum rules with approximate ground states

Electromagnetic and weak transitions tell us a great deal about the structure of atomic nuclei. Yet modeling transitions can be difficult: it is often easier to compute the ground state, if only as an approximation, than excited states. One alternative is through transition sum rules, in particular the non-energy-weighted and energy-weighted sum rules, which can be computed as expectation values of operators. We investigate by computing sum rules for a variety of nuclei, comparing the numerically exact full configuration-interaction shell model, as a reference, to Hartree-Fock, projected Hartree-Fock, and the nucleon pair approximation. Furthermore, these approximations yield reasonable agreement, which we explain by prior work on the systematics of transition moments.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Quantum probabilities from quantum entanglement: experimentally unpacking the Born rule

The Born rule, a foundational axiom used to deduce probabilities of events from wavefunctions, is indispensable in the everyday practice of quantum physics. It is also key in the quest to reconcile the ostensibly inconsistent laws of the quantum and classical realms, as it confers physical significance to reduced density matrices, the essential tools of decoherence theory. Following Bohr's Copenhagen interpretation, textbooks postulate the Born rule outright. But, recent attempts to derive it from other quantum principles have been successful, holding promise for simplifying and clarifying the quantum foundational bedrock. Moreover, a major family of derivations is based on envariance, a recently discovered symmetry of entangled quantum states. Here, we identify and experimentally test three premises central to these envariance-based derivations, thus demonstrating, in the microworld, the symmetries from which the Born rule is derived. Furthermore, we demonstrate envariance in a purely local quantum system, showing its independence from relativistic causality.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Nonequilibrium spectral moment sum rules of the Holstein–Hubbard model

Abstract We derive a general procedure for evaluating the n th derivative of a time-dependent operator in the Heisenberg representation and employ this approach to calculate the zeroth to third spectral moment sum rules of the retarded electronic Green’s function and self-energy for a system described by the Holstein–Hubbard model allowing for arbitrary spatial and time variation of all parameters (including spatially homogeneous electric fields and parameter quenches). For a translationally invariant (but time-dependent) Hamiltonian, we also provide sum rules in momentum space. The sum rules can be applied to various different phenomena like time-resolved angle-resolved photoemission spectroscopy and benchmarking the accuracy of numerical many-body calculations. This work also corrects some errors found in earlier work on simpler models.

Physics↗

ON THE STRENGTH OF THE HEMISPHERIC RULE AND THE ORIGIN OF ACTIVE-REGION HELICITY

Vector magnetograph and morphological observations have shown that the solar magnetic field tends to have negative (positive) helicity in the northern (southern) hemisphere, although only ∼60%-70% of active regions appear to obey this 'hemispheric rule'. In contrast, at least ∼80% of quiescent filaments and filament channels that form during the decay of active regions follow the rule. We attribute this discrepancy to the difficulty in determining the helicity sign of newly emerged active regions, which are dominated by their current-free component; as the transverse field is canceled at the polarity inversion lines, however, the axial component becomes dominant there, allowing a more reliable determination of the original active-region chirality. We thus deduce that the hemispheric rule is far stronger than generally assumed, and cannot be explained by stochastic processes. Earlier studies have shown that the twist associated with the axial tilt of active regions is too small to account for the observed helicity; here, both tilt and twist are induced by the Coriolis force acting on the diverging flow in the emerging flux tube. However, in addition to this east-west expansion about the apex of the loop, each of its legs must expand continually in cross section during its rise through the convection zone, thereby acquiring a further twist through the Coriolis force. Since this transverse pressure effect is not limited by drag or tension forces, the final twist depends mainly on the rise time, and may be large enough to explain the observed active-region helicity.

79 ASTRONOMY AND ASTROPHYSICS↗