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At least 199 records · Page 11
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

APOLLO: a facility-scale differentiable virtual accelerator for Fermilab

As the design complexity of modern accelerators grows, there is more interest in using advanced simulations that have fast execution time or yield additional insights like gradients. The FAST/IOTA facility has been working on implementing and experimentally validating an end-to-end digital twin that is both fast and gradient-aware, allowing for rapid prototyping of new software and experiments with minimal beam time costs. Our framework integrates physics and ML codes for linac and ring simulation through a set of generic interfaces between surrogate and physics-based sections. To reproduce device inputs and outputs, system state is exposed as a deterministic discrete event simulator. Because Fermilab is undergoing control system transition, both EPICS and ACNET frontends are supported. Recently, we have begun transitioning to a new community lattice standard, PALS, as well as developing standardized infrastructure for data ingest and normalization to prepare for model calibration during FAST proton injector commissioning. We discuss implementation details as well as challenges, and future plans to extend modelling to main complex proton accelerators like PIPII and Booster.

Kuklev, Nikita [Fermilab]↗
DOE OSTI2021

Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian

Complex interactions exist between microbiomes and their hosts. Increasingly, defensive metabolites that have been attributed to host biosynthetic capability are now being recognized as products of host-associated microbes. These unique metabolites often have bioactivity targets in human disease and can be purposed as pharmaceuticals. Polyketides are a complex family of natural products that often serve as defensive metabolites for competitive or pro-survival purposes for the producing organism, while demonstrating bioactivity in human diseases as cholesterol lowering agents, anti-infectives, and anti-tumor agents. Marine invertebrates and microbes are a rich source of polyketides. Palmerolide A, a polyketide isolated from the Antarctic ascidian Synoicum adareanum, is a vacuolar-ATPase inhibitor with potent bioactivity against melanoma cell lines. The biosynthetic gene clusters (BGCs) responsible for production of secondary metabolites are encoded in the genomes of the producers as discrete genomic elements. A candidate palmerolide BGC was identified from a S. adareanum microbiome-metagenome based on a high degree of congruence with a chemical structure-based retrobiosynthetic prediction. Protein family homology analysis, conserved domain searches, active site and motif identification were used to identify and propose the function of the ~75 kbp trans-acyltransferase (AT) polyketide synthase-non-ribosomal synthase (PKS-NRPS) domains responsible for the stepwise synthesis of palmerolide A. Though PKS systems often act in a predictable co-linear sequence, this BGC includes multiple trans-acting enzymatic domains, a non-canonical condensation termination domain, a bacterial luciferase-like monooxygenase (LLM), and is found in multiple copies within the metagenome-assembled genome (MAG). Detailed inspection of the five highly similar pal BGC copies suggests the potential for biosynthesis of other members of the palmerolide chemical family. This is the first delineation of a biosynthetic gene cluster from an Antarctic microbial species, recently proposed as Candidatus Synoicihabitans palmerolidicus. These findings have relevance for fundamental knowledge of PKS combinatorial biosynthesis and could enhance drug development efforts of palmerolide A through heterologous gene expression.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2021

Identification of the Tyrosine- and Phenylalanine-Derived Soluble Metabolomes of Sorghum

The synthesis of small organic molecules, known as specialized or secondary metabolites, is one mechanism by which plants resist and tolerate biotic and abiotic stress. Many specialized metabolites are derived from the aromatic amino acids phenylalanine (Phe) and tyrosine (Tyr). In addition, the improved characterization of compounds derived from these amino acids could inform strategies for developing crops with greater resilience and improved traits for the biorefinery. Sorghum and other grasses possess phenylalanine ammonia-lyase (PAL) enzymes that generate cinnamic acid from Phe and bifunctional phenylalanine/tyrosine ammonia-lyase (PTAL) enzymes that generate cinnamic acid and p -coumaric acid from Phe and Tyr, respectively. Cinnamic acid can, in turn, be converted into p -coumaric acid by cinnamate 4-hydroxylase. Thus, Phe and Tyr are both precursors of common downstream products. Not all derivatives of Phe and Tyr are shared, however, and each can act as a precursor for unique metabolites. In this study, 13 C isotopic-labeled precursors and the recently developed Precursor of Origin Determination in Untargeted Metabolomics (PODIUM) mass spectrometry (MS) analytical pipeline were used to identify over 600 MS features derived from Phe and Tyr in sorghum. These features comprised 20% of the MS signal collected by reverse-phase chromatography and detected through negative-ionization. Ninety percent of the labeled mass features were derived from both Phe and Tyr, although the proportional contribution of each precursor varied. In addition, the relative incorporation of Phe and Tyr varied between metabolites and tissues, suggesting the existence of multiple pools of p -coumaric acid that are fed by the two amino acids. Furthermore, Phe incorporation was greater for many known hydroxycinnamate esters and flavonoid glycosides. In contrast, mass features derived exclusively from Tyr were the most abundant in every tissue. The Phe- and Tyr-derived metabolite library was also utilized to retrospectively annotate soluble MS features in two brown midrib mutants ( bmr6 and bmr12 ) identifying several MS features that change significantly in each mutant.

09 BIOMASS FUELS↗
DOE OSTI2022

Towards a Counting Point Detector for Nanosecond Coherent X-ray Science

We present the technical realization of a high-speed hard X-ray single-photon counting-detection scheme based on a commercial avalanche silicon photodiode and high-speed oscilloscope. The development is motivated by the need to perform pulse-resolved photon-correlation and pump-probe studies at synchrotron sources with densely packed pulse patterns that result in high repetition rate pulses on the order of hundreds of MHz. Commissioning experiments are performed at the 1C PAL-KRISS beamline at PLS-II of South Korea operating at a burst mode maximum repetition rate of 500 MHz. In such a high count-rate measurement, detector dead-time can lead to a distortion of counting statistics. We are able to model the counting behavior of our detector under these conditions with a detector dead-time comparable to time between X-ray pulses, implying that nanosecond X-ray photon correlation spectroscopy should be possible at diffraction-limited light sources.

36 MATERIALS SCIENCE↗
DOE OSTI2017

Masses of the Planetary Nebula Central Stars in the Galactic Globular Cluster System from HST Imaging and Spectroscopy

The globular cluster (GC) system of our Galaxy contains four planetary nebulae (PNe): K 648 (or Ps 1) in M15, IRAS 18333-2357 in M22, JaFu 1 in Pal 6, and JaFu 2 in NGC 6441. Because single-star evolution at the low stellar mass of present-epoch GCs was considered incapable of producing visible PNe, their origin presented a puzzle. We imaged the PN JaFu 1 with the Hubble Space Telescope (HST) to obtain photometry of its central star (CS) and high-resolution morphological information. We imaged IRAS 18333-2357 with better depth and resolution, and we analyzed its archival HST spectra to constrain its CS temperature and luminosity. All PNe in Galactic GCs now have quality HST data, allowing us to improve CS mass estimates. We find reasonably consistent masses between 0.53 and 0.58 M {sub ⊙} for all four objects, though estimates vary when adopting different stellar evolutionary calculations. The CS mass of IRAS 18333-2357, though, depends strongly on its temperature, which remains elusive due to reddening uncertainties. For all four objects, we consider their CS and nebula masses, their morphologies, and other incongruities to assess the likelihood that these objects formed from binary stars. Although generally limited by uncertainties (∼0.02 M {sub ⊙}) in post-AGB tracks and core mass versus luminosity relations, the high-mass CS in K 648 indicates a binary origin. The CS of JaFu 1 exhibits compact, bright [O iii] and H α emission, like EGB 6, suggesting a binary companion or disk. Evidence is weaker for a binary origin of JaFu 2.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

Slant, Fan, and Narrow: The Response of Stellar Streams to a Tilting Galactic Disk

Stellar streams are sensitive tracers of the gravitational potential, which is typically assumed to be static in the inner Galaxy. However, massive mergers like Gaia-Sausage-Enceladus can impart torques on the stellar disk of the Milky Way that result in the disk tilting at rates of up to 10°–20° Gyr –1 . Here, we demonstrate the effects of disk tilting on the morphology and kinematics of stellar streams. Through a series of numerical experiments, we find that streams with nearby apocenters (r apo ≲ 20 kpc) are sensitive to disk tilting, with the primary effect being changes to the stream's on-sky track and width. Interestingly, disk tilting can produce both more diffuse streams and more narrow streams, depending on the orbital inclination of the progenitor and the direction in which the disk is tilting. Our model of Pal 5's tidal tails for a tilting rate of 15° Gyr –1 is in excellent agreement with the observed stream's track and width, and reproduces the extreme narrowing of the trailing tail. We also find that failure to account for a tilting disk can bias constraints on shape parameters of the Milky Way's local dark matter distribution at the level of 5%–10%, with the direction of the bias changing for different streams. Disk tilting could therefore explain discrepancies in the Milky Way's dark matter halo shape inferred using different streams.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2026

Reconstructing the Stripping History of the Sagittarius Stream with Neural Networks

The Sagittarius (Sgr) Stream is produced by the ongoing disruption of the Sgr dwarf spheroidal (dSph) galaxy and is thought to contain multiple wraps that were stripped during different pericentric passages. In this study, we introduce a neural-network–based method trained on N-body simulations to infer the stripping time of Sgr Stream stars directly from their phase-space coordinates. We combine spectroscopic data from SEGUE, APOGEE DR17, and LAMOST DR7 low-resolution spectroscopic (LRS) survey with Gaia EDR3 astrometry and distance estimates from the latest StarHorse catalog to identify high-quality Sgr Stream members. Applying our method to these stars, we measure a clear metallicity gradient with stripping time, well described by a linear relation with slope ∼0.3 dex Gyr −1 . We further predict the stripping times of globular clusters previously suggested to originate from the Sgr dSph. M 54, Terzan 7, Terzan 8, and Arp 2 exhibit stripping times consistent with being currently bound to the Sgr remnant. Pal 12, Whiting 1, and NGC 2419 are inferred to have been stripped 0.9 ± 0.1, 1.1 ± 0.2, and 2.1 ± 0.2 Gyr ago, respectively. For NGC 4147 and NGC 5634, whose membership in the Sgr system remains uncertain, our analysis suggests stripping times of 1.1 ± 0.4 and 1.1 ± 0.1 Gyr, respectively, if they are ultimately confirmed as genuine Sgr members. These results demonstrate that data-driven models of dynamical stripping histories offer a promising approach for reconstructing the formation and chemical evolution of the Sgr Stream.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS1978

The role of cell membranes in the regulation of lignification in pine cells

The identity of pine cell membranes bearing PAL enzyme activity, the isolation of a plasma membrane preparation from pine cells for testing as a regulatory barrier in lignification, and the measurement of the geopotential effect in pine stems are presented. A model to describe and predict the interaction of gravity and lignification of higher plants was developed.

Hendrix, D. L.↗
NASA NTRS1979

The evolution and variability of atmospheric ozone over geological time

The rise of atmospheric O3 as a function of the evolution of O2 has been investigated using a one-dimensional steady-state photochemical model based on the chemistry and photochemistry of Ox(O3, O, O(1D)), N2O, NOx(NO, NO2, HNO3), H2O, and HOx(H, OH, HO2, H2O2) including the effect of vertical eddy transport on the species distribution. The total O3 column density was found to maximize for an O2 level of 0.1 present atmospheric level (PAL) and exceeded the present total O3 column by about 40%. For that level of O2, surface and tropospheric O3 densities exceeded those of the present atmosphere by about an order of magnitude. Surface and tropospheric OH densities of the paleoatmosphere exceeded those of the present atmosphere by orders of magnitude. It was also found that in the O2-deficient paleoatmosphere, N2O (even at present atmospheric levels) produces much less NOx than it does in the present atmosphere.

Levine, J. S.↗
NASA NTRS1983

Investigation of digital encoding techniques for television transmission

Composite color television signals are sampled at four times the color subcarrier and transformed using intraframe two dimensional Walsh functions. It is shown that by properly sampling a composite color signal and employing a Walsh transform the YIQ time signals which sum to produce the composite color signal can be represented, in the transform domain, by three component signals in space. By suitably zonal quantizing the transform coefficients, the YIQ signals can be processed independently to achieve data compression and obtain the same results as component coding. Computer simulations of three bandwidth compressors operating at 1.09, 1.53 and 1.8 bits/ sample are presented. The above results can also be applied to the PAL color system.

Schilling, D. L.↗
NASA NTRS1984

Effects of high CO2 levels on surface temperature and atmospheric oxidation state of the early earth

One-dimensional radiative and photochemical models are used to determine how much CO2 must have been present to maintain a temperate early climate and to examine the consequences that are implied for the controls on atmospheric oxidation state. It is shown that CO2 concentrations of the order of 1000 PAL are required to keep the average surface temperature close to the present value, if albedo changes and heating by reduced greenhouse gases were relatively unimportant. The oxidation state of such a high-CO2, prebiotic atmosphere should have been largely determined by the balance between the H2O2 rainout rate and the rate at which hydrogen escaped to space, with only a weak dependence on the volcanic outgassing rate or on other speculative sources of H2. The implied upper limit on the ground-level O2 mixing ratio is approximately 10 to the -11th and is subject to less uncertainty than the results of previous models.

Kasting, J. F.↗
NASA NTRS1986

Oxygen and the evolution of metabolic pathways

While a considerable amount of evidence has been accumulated about the history of oxygen on this planet, little is known about the relative amounts to which primitive cells might have been exposed. One clue may be found in the metabolic pathways of extant microorganisms. While eucaryotes are principally aerobic organisms, a number are capable of anaerobic growth by fermentation. One such eucaryotic microorganism, Saccharomyces cerevisiae, will grow in the complete absence of oxygen when supplemented with unsaturated fatty acid and sterol. Oxygen-requiring enzymes are involved in the synthesis of both of these compounds. Studies have demonstrated that the oxidative desaturation of palmitic acid and the conversion of squalene to sterols occur in the range of 10-(3) to 10(-2) PAL. Thus, if the oxygen requirements of these enzymatic processes are an indication, eucaryotes might be more primitive than anticipated from the microfossil record. Results of studies on the oxygen requirements for sterol and unsaturated fatty acid synthesis in a more primitive procaryotic system are also discussed.

Jahnke, L. L.↗
NASA NTRS1992

Multiple scattering lidar returns from stratus clouds

Multiple scattering lidar returns from stratus clouds were measured using a multi-field-of-view (MFOV) lidar operating at 1.054 microns. The detector consists of four concentric silicon photodiodes which define half-angle fields of view (FOV) of 3.8, 12.5, 25 and 38.5 mrad. The central FOV receives the conventional lidar signal, while the outer FOV's receive only multiply scattered contributions. The ratios of the signals in the outer FOV's to the signal in the central FOV is an indication of the lateral spreading of the scattered component of the laser pulse as it propagates through the cloud. MFOV lidar returns from stratus clouds measured between October 1991 and March 1992 can be divided into two distinct types, those with large multiple scattering ratios and those with small ratios. An example of each type of return is shown. Both measurements were made at an elevation angle of 45 degrees. Clouds with small multiple scattering signals probably have a high concentration of much larger particles on the order of hundreds of micrometers in size. This is a typical size range for suspended ice crystals or precipitations. Stratus clouds often have a high concentration of ice crystals even when there is no precipitation. Large ice crystals would give smaller signals in the outer FOV's because much of the scattered intensity is contained in a narrow diffraction peak with an angular width on the order of milliradians. The result is that for a given extinction, many more orders of scattering are required for the laser pulse to spread out. So far we have not been able to do simulations of MFOV lidar returns from ice crystal clouds because of uncertainties about the phase function of the crystals, particularly the magnitude of the backscatter peak at 180 degrees. On two occasions, MFOV lidar returns measured just prior to snowfall, showed a striking vertical profile. An example is shown. From 900 to 1300m, the multiply scattered signals are negligible compared to the return in the central FOV. Abruptly, at 1300m strong signals begin in the outer FOVs. These results could be explained by the presence of a cloud layer composed of water droplets at a range of 1300m (or 900m above ground) with snow precipitations forming at the bottom of the cloud. By measuring the polarization ratio of lidar signals, Pal and Carswell have observed snow precipitating from a cloud layer composed of water droplets. Based on these results, we believe that analysis of multiple scattering lidar returns can yield important information on the phase of cloud particles.

Hutt, D. L.↗
NASA NTRS1996

Development of the SEASIS instrument for SEDSAT

Two SEASIS experiment objectives are key: take images that allow three axis attitude determination and take multi-spectral images of the earth. During the tether mission it is also desirable to capture images for the recoiling tether from the endmass perspective (which has never been observed). SEASIS must store all its imagery taken during the tether mission until the earth downlink can be established. SEASIS determines attitude with a panoramic camera and performs earth observation with a telephoto lens camera. Camera video is digitized, compressed, and stored in solid state memory. These objectives are addressed through the following architectural choices: (1) A camera system using a Panoramic Annular Lens (PAL). This lens has a 360 deg. azimuthal field of view by a +45 degree vertical field measured from a plan normal to the lens boresight axis. It has been shown in Mr. Mark Steadham's UAH M.S. thesis that his camera can determine three axis attitude anytime the earth and one other recognizable celestial object (for example, the sun) is in the field of view. This will be essentially all the time during tether deployment. (2) A second camera system using telephoto lens and filter wheel. The camera is a black and white standard video camera. The filters are chosen to cover the visible spectral bands of remote sensing interest. (3) A processor and mass memory arrangement linked to the cameras. Video signals from the cameras are digitized, compressed in the processor, and stored in a large static RAM bank. The processor is a multi-chip module consisting of a T800 Transputer and three Zoran floating point Digital Signal Processors. This processor module was supplied under ARPA contract by the Space Computer Corporation to demonstrate its use in space.

Maier, Mark W.↗
NASA NTRS1996

SEDSAT-1 Technology Development

The Students for the Exploration and Development of Space Satellite (SEDSAT-1) is an ambitious project to design, build, and fly a generally-accessible low-cost satellite which will 1) act as a technology demonstration to verify the suitability of novel optical, battery, microprocessor, and memory hardware for space flight environments, (2) to advance the understanding of tether dynamics and environmental science through the development of advanced imaging experiments, (3) to act as a communication link for radio amateurs, and (4) to provide graduate and undergraduate students with a unique multi-disciplinary experience in designing complex real-world hardware/software. This report highlights the progress made on this project during the time period from January 2, 1996 to June 1, 1996 at the end of which time the SEASIS 0.7 version software was completed and integrated on the SEASIS breadboard, a functional prototype of the Panoramic Annual Lenses (PAL) camera was developed, the preferred image compression technique was selected, the layout of the SEASIS board was begun, porting of the SCOS operating system to the command data system (CDS) board was begun, a new design for a tether release mechanism was developed, safety circuitry to inhibit tether cutting was developed and prototyped, material was prepared to support a comprehensive safety review of the project which was held at Johnson Space Center (JSC) (which was personally attended by one of the Principal Investigators), and prototype ground software was developed.

Maier, Mark W.↗
NASA NTRS1994

Rosat Observations of Nine Globular Clusters

The ROSAT HRI was used to image fields around nine Galactic globular clusters that have central densities in the range of 10(exp 4) - 10(exp 5) solar mass pc(exp -3) and that had not previously been observed with the Einstein Observatory. We detected X-ray sources associated with Pal 2 and NGC 6304 with luminosities of 1.1 x 10(exp 34) ergs/s and 1.2 x 10(exp 33) ergs/s, respectively. No X-ray emission was detected from the source in Ter 6, thus confirming its transient nature. In all, there were 23 serendipitous sources found in the nine fields; none was apparently associated with any of the other seven clusters. The results are discussed in the context of low-luminosity cluster X-ray sources, in general.

Rappaport, S.↗
NASA NTRS2000

An Algorithm to Atmospherically Correct Visible and Thermal Airborne Imagery

The program Watts implements a system of physically based models developed by the authors, described elsewhere, for the removal of atmospheric effects in multispectral imagery. The band range we treat covers the visible, near IR and the thermal IR. Input to the program begins with atmospheric pal red models specifying transmittance and path radiance. The system also requires the sensor's spectral response curves and knowledge of the scanner's geometric definition. Radiometric characterization of the sensor during data acquisition is also necessary. While the authors contend that active calibration is critical for serious analytical efforts, we recognize that most remote sensing systems, either airborne or space borne, do not as yet attain that minimal level of sophistication. Therefore, Watts will also use semi-active calibration where necessary and available. All of the input is then reduced to common terms, in terms of the physical units. From this it Is then practical to convert raw sensor readings into geophysically meaningful units. There are a large number of intricate details necessary to bring an algorithm or this type to fruition and to even use the program. Further, at this stage of development the authors are uncertain as to the optimal presentation or minimal analytical techniques which users of this type of software must have. Therefore, Watts permits users to break out and analyze the input in various ways. Implemented in REXX under OS/2 the program is designed with attention to the probability that it will be ported to other systems and other languages. Further, as it is in REXX, it is relatively simple for anyone that is literate in any computer language to open the code and modify to meet their needs. The authors have employed Watts in their research addressing precision agriculture and urban heat island.

Rickman, Doug L.↗
NASA NTRS1999

Carbon Dioxide Cycling, Climate, Impacts, and the Faint Young Sun

Evidence for relatively mild climates on ancient Earth and Mars has been a puzzle in light of the faint early sun. The geologic evidence, although far from conclusive, would appear to indicate that the surfaces of both planets were, if anything, warmer ca. 3-4 Ga than they are now. The astrophysical argument that the sun ought to have brightened approx. 30% since it reached the main sequence is hard to refute. There results a paradox between the icehouse we expect and the greenhouse we think we see. The usual fix has been to posit massive CO2 atmospheres, although reduced gases (e.g., NH3 or CH4 ) have had their partisans. Evidence against siderite in paleosols dated 2.2-2.75 Ga sets a rough upper limit of 30 PAL (present atmospheric levels) on pCO2 at that time. This is an order of magnitude short of what is needed to defeat the fainter sun. We present here an independent argument against high pCO2 on early Earth that applies not only to the Archean but yet more forcefully to the Hadean era. Additional information is contained in the original extended abstract.

Zahnle, K. J.↗