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At least 199 records · Page 11

Comparison of fixed charge and polarizable models for predicting the structural, thermodynamic, and transport properties of molten alkali chlorides

Results from extensive molecular dynamics simulations of molten LiCl, NaCl, KCl, and RbCl over a wide range of temperatures are reported. Comparison is made between the “Polarizable Ion Model” (PIM) and the non-polarizable “Rigid Ion Model” (RIM). Densities, self-diffusivities, shear viscosities, ionic conductivities, and thermal conductivities are computed and compared with experimental data. In addition, radial distribution functions are computed from ab initio molecular dynamics simulations and compared with the two sets of classical simulations as well as experimental data. Here, the two classical models perform reasonably well at capturing structural and dynamic properties of the four molten alkali chlorides, both qualitatively and often quantitatively. With the singular exception of liquid density, for which the PIM is more accurate than the RIM, there are few clear trends to suggest that one model is more accurate than the other for the four alkali halide systems studied here.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A modified many-body dissipative particle dynamics model for mesoscopic fluid simulation: methodology, calibration, and application for hydrocarbon and water

The many-body dissipative particle dynamics (mDPD) is a prominent mesoscopic multiphase model for fluid transport in mesoconfinement. However, it has been a long-standing challenge for mDPD (and other multiphase-enabled DPD models) to accurately predict real-fluid static and dynamic properties simultaneously. We have developed a modified mDPD model to overcome the issue and a rigorous calibration approach that uses reference data, including experimental and/or molecular dynamics (MD) simulations to parameterise the modified mDPD for real fluids. We choose heptane as a representative example of hydrocarbon in source rocks to demonstrate the model's capability to accurately predict the equation of state (EOS), free surface tension, diffusivity, and viscosity. Our timing test shows that the modified mDPD is 400–500 times faster than its MD counterpart for simulating bulk heptane in equivalent volumes. To further demonstrate the robustness of the model, we revisited the benchmark problem of mesoscopic modelling of water, in which all the previous works on DPD reported only a limited portion of the water properties. Here, we show that the modified mDPD can provide accurate modelling of water static and dynamic properties and an EOS that matches the experimental data to a large range of confinement pressure.

42 ENGINEERING↗

Hugoniot and Dynamic Strength in Polyurea

Polyurea is of interest for blast mitigation of structures, which requires a good understanding of the dynamic properties including the shock Hugoniot and dynamic spall and shear strength. In this study, reverse impact experiments were used to determine the shock Hugoniot, direct impact experiments were used to determine the spall strength, and lateral manganin gauge experiments were used to determine the dynamic shear strength. Reverse impact experiments revealed that the Hugoniot has a linear fit at low pressures and appears to be undergoing a reaction at higher pressures. The spall strength experiments in this study in combination with the literature data showed that the spall strength increases as a function of pressure, which is unusual in polymers and may be attributed to polyurea transforming to a glassy phase. In the shear strength experiments, the shear stress was shown to increase with increasing longitudinal stress in polyurea, similar to estane, another elastomer.

36 MATERIALS SCIENCE↗

Thermal Protection System Evaluation Using Arc-jet Flows: Flight Simulation or Research Tool?

The arc-jet has been used to evaluate thermal protection systems (TPS) and materials for the past forty years. Systems that have been studied in this environmerd include ablators, active, and passive TPS concepts designed for vehicles entering planetary and Earth atmospheres. The question of whether arc-jet flow can simulate a flight environment or is it a research tool that provides an aero-thermodynamic heating environment to obtain critical material properties will be addressed. Stagnation point tests in arc-jets are commonly used to obtain material properties such as mass loss rates, thermal chemical stability data, optical properties, and surface catalytic efficiency. These properties are required in computational fluid dynamic codes to accurately predict the performance of a TPS during flight. Special facilities have been developed at NASA Ames Research Center to approximate the flow environment over the mid-fuselage and body flap regions of proposed space-planes type vehicles. This paper compares flow environments generated in flight over a vehicle with those created over an arc-jet test articles in terms of scale, chemistry, and fluid dynamic properties. Flight experiments are essential in order to validate the material properties obtained from arc-jet tests and used to predict flight performance of any TPS being considered for use on a vehicle entering the Earth atmosphere at hypersonic speed.

Stewart, David A.↗

Dynamical disparity between hydration shell water and RNA in a hydrated RNA system

We have performed large-scale molecular dynamics simulations on hammerhead RNA in water and observed disparity in the dynamical properties between water and RNA. The simulations are carried out above the dynamical transition temperature of RNA and is varied from below freezing to ambient temperature. Using this model, we observed different types of relaxation dynamics for water and RNA. While RNA shows a single stretched exponential decay, the water molecules show a double-exponential decay. Both water and RNA dynamics show temperature and spatial dependence on relaxation times. The RNA relaxations are many orders of magnitude slower compared to water for all temperature and spatial length scales. RNA relaxations show predominantly heterogeneous dynamics. Water dynamics in the hydration shell show a combination of interfacial water and bulk-like water properties and the water dynamics are decoupled from the RNA dynamics. Furthermore, these results explain the dynamics of water in the hydration shell and that of RNA.

59 BASIC BIOLOGICAL SCIENCES↗

Solar corona synoptic observations from SOHO with an extreme ultraviolet imaging telescope

The major scientific objective of the EUV Imaging Telescope (EIT) is to study the evolution of coronal structure over a wide range of spatial and temporal scales and temperatures. A second strategic objective is to provide full disk synoptic maps of the global corona to aid in unifying SOHO (Solar and Heliospheric Observatory)/Cluster investigations. EIT will also provide images to support the planning of detailed spectroscopic investigations by the CDS (Coronal Diagnostic Spectrometer) and SUMER spectrometers in SOHO. EIT observations will be made in four narrow spectral bands, centered at 171 A (Fe 9), 195 A(Fe 12), 284 A (Fe 15), and 304 A (He 2) representing restricted temperature domains within a wide temperature range from 40,000 to 3,000,000 K. The results will be images of the solar atmosphere from the upper chromosphere and transition region to the active region corona. These maps, made at appropriate time intervals, will be used to study the fine structures in the solar corona and to relate their dynamic properties to the underlying chromosphere and photosphere. Dynamic events in the inner corona will be related to white light transients in the outer corona, and observations of the internal structure of coronal holes will be used to investigate origins of the solar wind.

Delaboudiniere, Jean-Pierre↗

Parallel-in-time quantum simulation via Page and Wootters quantum time

In the past few decades, researchers have created a veritable zoo of quantum algorithms by drawing inspiration from classical computing, information theory, and even from physical phenomena. Here, we present quantum algorithms for parallel-in-time simulations that are inspired by the Page and Wootters formalism. In this framework, and thus in our algorithms, the classical time variable of quantum mechanics is promoted to the quantum realm by introducing a Hilbert space of “clock” qubits that are then entangled with the “system” qubits. We show that our algorithms can compute temporal properties over 𝑁 different times of many-body systems by only using log⁡(𝑁) clock qubits. As such, we achieve an exponential trade-off between time and spatial complexities. In addition, we rigorously prove that the entanglement created between the system qubits and the clock qubits has operational meaning, as it encodes valuable information about the system’s dynamics. We also provide a circuit depth estimation of all the protocols, showing a running time advantage in computation times over traditional sequential-in-time algorithms. In particular, for the case when the dynamics are determined by the Aubry-Andre model, we present a hybrid method for which our algorithms have a depth that only scales as 𝒪⁡(log⁡(𝑁)⁢𝑛). As a by-product, we can relate the previous schemes to the problem of equilibration of an isolated quantum system, thus indicating that our framework enables a new dimension for studying dynamical properties of many-body systems.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Temperature dependence of structural, dynamical, and electronic properties of amorphous Bi 2 Te 3 : an ab initio study

Bismuth telluride (Bi 2 Te 3 ) has garnered significant interest in thermoelectric applications and three-dimensional topological insulators due to its unique electronic, transport, and thermal properties. Bi 2 Te 3 and Sb 2 Te 3 chalcogenide compounds have the same crystal structure. While Sb 2 Te 3 has been shown to be a prototypical phase change memory (PCM) compound along the pseudobinary tie-line of Ge-Sb-Te alloys, whether Bi 2 Te 3 can also exhibit PCM functionality is still not well established. In this work, a systematic study on the structural, dynamical, and electronic properties of amorphous Bi 2 Te 3 during the quenching process has been performed by using ab initio molecular dynamics simulations. Pair correlation function, coordination number, bond-angle distribution functions, and a novel atomistic cluster alignment method are used to explore the structural characteristics of Bi 2 Te 3 as a function of temperature. Our study shows that there are many distorted octahedral clusters in amorphous Bi 2 Te 3 . In comparison with the local structures in Sb 2 Te 3 , we found that the degree of distortion of the octahedrons in the Bi 2 Te 3 system is smaller than that in Sb 2 Te 3 system. Moreover, the changes in the dynamical properties of Bi 2 Te 3 from liquid to glassy state are also explored. The approximate range of liquid-to-glass transition temperature is determined to be between 673 and 723 K. The electronic properties of Bi2Te 3 and Sb 2 Te 3 are also analysed by density-of-states and Bader charge calculations, both of them in glass state are semiconductors. Our studies provide useful insights into the local structure and dynamical properties of Bi 2 Te 3 at the atomistic level during the fast cooling process, and suggest that the compound can be a candidate for PCM materials.

36 MATERIALS SCIENCE↗

Strain buildup and release, earthquake prediction and selection of VBL sites for margins of the north Pacific

During the past year, the grant supported research on several aspects of crustal deformation. The relation between earthquake displacements and fault dimensions was studied in an effort to find scaling laws that relate static parameters such as slip and stress drop to the dimensions of the rupture. Several implications of the static relations for the dynamic properties of earthquakes such as rupture velocity and dynamic stress drop were proposed. A theoretical basis for earthquake related phenomena associated with slow rupture growth or propagation, such as delayed multiple events, was developed using the stress intensity factor defined in fracture mechanics and experimental evidence from studies of crack growth by stress corrosion. Finally, extensive studies by Japanese geologists have established the offset across numerous faults in Japan over the last one hundred thousand years. These observations of intraplate faulting are being used to establish the spatial variations of the average strain rate of subregions in southern Japan.

Scholz, C. H.↗

Construction of Reconfigurable and Polymorphic DNA Origami Assemblies with Coiled‐Coil Patches and Patterns

Abstract DNA origami nanodevices achieve programmable structure and tunable mechanical and dynamic properties by leveraging the sequence‐specific interactions of nucleic acids. Previous advances have also established DNA origami as a useful building block to make well‐defined micron‐scale structures through hierarchical self‐assembly, but these efforts have largely leveraged the structural features of DNA origami. The tunable dynamic and mechanical properties also provide an opportunity to make assemblies with adaptive structures and properties. Here the integration of DNA origami hinge nanodevices and coiled‐coil peptides are reported into hybrid reconfigurable assemblies. With the same dynamic device and peptide interaction, it is made multiple higher‐order assemblies (i.e., polymorphic assembly) by organizing clusters of peptides into patches or arranging single peptides into patterns on the surfaces of DNA origami to control the relative orientation of devices. The coiled‐coil interactions are used to construct circular and linear assemblies whose structure and mechanical properties can be modulated with DNA‐based reconfiguration. Reconfiguration of linear assemblies leads to micron scale motions and ≈2.5‐10‐fold increase in bending stiffness. The results provide a foundation for stimulus‐responsive hybrid assemblies that can adapt their structure and properties in response to nucleic acid, peptide, protein, or other triggers.

59 BASIC BIOLOGICAL SCIENCES↗

Ice sculpting: An artificial spin ice Tutorial on controlling microstate and geometry for magnonics and neuromorphic computing

Artificial spin ice, arrays of strongly interacting nanomagnets, are complex magnetic systems with many emergent properties, rich microstate spaces, intrinsic physical memory, high-frequency dynamics in the GHz range, and compatibility with a broad range of measurement approaches. This Tutorial article aims to provide the foundational knowledge needed to understand, design, develop, and improve the dynamic properties of artificial spin ice. Special emphasis is placed on introducing the theory of micromagnetics, which describes the complex dynamics within these systems, along with their design, fabrication methods, and standard measurement and control techniques. The article begins with a review of the historical background, introducing the underlying physical phenomena and interactions that govern artificial spin ice. We then explore the standard experimental techniques used to prepare the microstate space of the nanomagnetic array and to characterize magnetization dynamics, both in artificial spin ice and more broadly in ferromagnetic materials. Finally, we introduce the basics of neuromorphic computing applied to the case of artificial spin ice systems with a goal to help researchers new to the field grasp these exciting new developments.

Sultana, Rawnak [Univ. of Delaware, Newark, DE (Un↗

How arsenic makes amorphous GeSe a robust chalcogenide glass for advanced memory integration

The 3D integration technology in semiconductor fabrication requires a key component, the ovonic threshold switching (OTS) selector, to suppress the current leakage. The As doped amorphous (a-) GeSe glass is a commercialized OTS material in 3D phase-change memory, but the understanding of such a doping mechanism is still inadequate. Here we systematically explore the effect of As doping on the structural, bonding, and dynamics properties of a-GeAsSe using ab initio molecular dynamics simulations. The results reveal that As atoms form strong bonds with both Ge and Se atoms. The distorted octahedral structures and the 5-fold rings linked by atoms are increased. All of these structural features lead to a more disordered configuration. Moreover, as atoms have notably slowed down the atomic mobility, rendering a-GeAsSe a high stability. Overall, our studies offer insightful understanding of As-doping in OTS materials, paving the way for the design and application of advanced selector devices.

36 MATERIALS SCIENCE↗

Direct determination of mode-projected electron-phonon coupling in the time domain

Ultrafast spectroscopies have become an important tool for elucidating the microscopic description and dynamical properties of quantum materials. In particular, by tracking the dynamics of nonthermal electrons, a material’s dominant scattering processes can be revealed. In this paper, we present a method for extracting the electron-phonon coupling strength in the time domain, using time- and angle-resolved photoemission spectroscopy (TR-ARPES). This method is demonstrated in graphite, where we investigate the dynamics of photoinjected electrons at the $\overline{K}$ point, detecting quantized energy-loss processes that correspond to the emission of strongly coupled optical phonons. We show that the observed characteristic time scale for spectral weight transfer mediated by phonon-scattering processes allows for the direct quantitative extraction of electron-phonon matrix elements for specific modes.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Experimental Study of the 3 He and Neutron Spin Structure at Low Q 2 and The Upgrade of the JLab Polarized 3 He Target

In the scattering process off a nuclear or nucleon target, the Gerasimov-Drell-Hearn (GDH) sum rule for real photons (Q 2 =0 where Q 2 &equiv; -q 2 with q the photon's 4-momentum) relates static properties of the target particle's ground state to dynamic properties of all its excited states. On the other side of the Q 2 spectrum, the Bjorken sum rule holds in the Bjorken limit Q 2 &rarr; &infin;. Bjorken sum rule relates the final structure functions of the proton and neutron to the nucleon axial coupling constant in weak decay. These two sum rules belong to domains where calculations are achievable but use different degrees of freedom: hadronic degrees of freedom at low Q 2 versus partonic degrees of freedom at intermediate Q 2 . Meanwhile, different methods have been used to connect the two sum rules at finite Q 2 values: Chiral Perturbation Theory is used to expand the GDH sum rule while Operator Product Expansion is used to expand the Bjorken sum rule. In recent decades, improvements in polarized beam and polarized target techniques have made it possible to test theoretical predictions in the intermediate Q 2 region. During the Jefferson Lab (JLab) Hall A E97110 experiment, a precise measurement of polarized cross sections was performed at 0.02 < Q 2 < 0.3 GeV 2 using a polarized 3 He target as an effective polarized neutron target. The measured data allowed us to test predictions of Chiral Perturbation Theory at very low Q 2 . Furthermore, an extrapolation to the real photon point Q 2 =0 tests the GDH sum rule on the neutron. In order to reach the small angles necessary for the low Q 2 range, a new septum magnet was installed in Hall A for this experiment. Unfortunately, the magnet was mis-wired during initial running. There were therefore two periods for this experiment: the first period had the defective magnet due to mis-wiring; while in the second period, the magnet had been fixed and was working properly. The cross sections and the asymmetries for the first period must be extracted using a difficult and unusual method employing focal plane variables in the spectrometer. In the work described in this thesis, the target-plane and focal-plane method will be established first and confirmed by elastic scattering cross section measurements from carbon foil and 3 He targets. Cross sections and asymmetries of inelastic scattering were then extracted using the same method, which constitute the main physics results of this thesis. Preliminary results on ITT , the integral of the polarized cross section, were also extracted and are presented in this thesis. In addition to the data analysis of E97110, this thesis includes instrumentation work performed on the polarized 3 He target at JLab. For the 12 GeV program of JLab, the polarized 3 He target is being upgraded to satisfy new experimental requirements. The new target is a convection-based cell with two transfer tubes rather than a single transfer tube as in the former 6 GeV design. The first stage of the target upgrade aims to produce a 40 cm long, 10 amg target that can withstand 30 &mu;A of electron beam current with an in-beam polarization of 55%, doubling the figure-of-merit from the 6 GeV time. Several studies were conducted at the Test Lab of JLab on the new convection cell. Work and improvement done on the Pulse Nuclear Magnetic Resonance (NMR) polarimetry and its test results will be presented. As this thesis is written, the target is being installed in Hall C of JLab in preparation for a 6-month long running from November 2019 to May 2020.

Ton, Nguyen↗