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At least 199 records · Page 11

Life-Cycle Inventory of Critical Materials: Nickel, Copper, Titanium, and Rare-Earth Elements

The United States has developed a list of critical minerals/materials whose sustained and reliable supply is pivotal to the robust functioning of critical industrial sectors. A key concern with these minerals is their environmental effects as a function of their production location. This requires material and energy flow details for their processing steps. This report provides a life-cycle inventory (LCI) for producing four critical minerals and/or material systems (nickel, copper, titanium, and rare-earth elements) incorporated in the updated GREET® (Greenhouse gases, Regulated Emissions, and Energy use in Technologies) model. For these systems, we provide an LCI as a function of production location – domestic (within the United States) and international (geographies from where the US imports these minerals). Our LCI also considers variations in ore grades for nickel and copper. This report also provides an LCI for all intermediate materials used to produce these critical materials.

58 GEOSCIENCES↗

Self-consistent implementation of meta-GGA functionals for the ONETEP linear-scaling electronic structure package

Accurate and computationally efficient exchange-correlation functionals are critical to the successful application of linear-scaling density functional theory (DFT). Local and semi-local functionals of the density are naturally compatible with linear-scaling approaches, having a general form which assumes the locality of electronic interactions and which can be efficiently evaluated by numerical quadrature. Presently, the most sophisticated and flexible semi-local functionals are members of the meta-generalized-gradient approximation (meta-GGA) family, and depend upon the kinetic energy density, τ, in addition to the charge density and its gradient. In order to extend the theoretical and computational advantages of τ-dependent meta-GGA functionals to large-scale DFT calculations on thousands of atoms, we have implemented support for τ-dependent meta-GGA functionals in the ONETEP program. In this paper we lay out the theoretical innovations necessary to implement τ-dependent meta-GGA functionals within ONETEP's linear-scaling formalism. We present expressions for the gradient of the τ-dependent exchange-correlation energy, necessary for direct energy minimization. We also derive the forms of the τ-dependent exchange-correlation potential and kinetic energy density in terms of the strictly localized, self-consistently optimized orbitals used by ONETEP. To validate the numerical accuracy of our self-consistent meta-GGA implementation, we performed calculations using the B97M-V and PKZB meta-GGAs on a variety of small molecules. Using only a minimal basis set of self-consistently optimized local orbitals, we obtain energies in excellent agreement with large basis set calculations performed using other codes. Lastly, to establish the linear-scaling computational cost and applicability of our approach to large-scale calculations, we present the outcome of self-consistent meta-GGA calculations on amyloid fibrils of increasing size, up to tens of thousands of atoms.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Computing Legacy Software Behavior to Understand Functionality and Security Properties: An IBM/370 Demonstration

Organizations maintaining mainframe legacy software can benefit from code modernization and incorporation of security capabilities to address the current threat environment. Oak Ridge National Laboratory is developing the Hyperion system to compute the behavior of software as a means to gain understanding of software functionality and security properties. Computation of functionality is critical to revealing security attributes, which are in fact specialized functional behaviors of software. Oak Ridge is collaborating with MITRE Corporation to conduct a demonstration project to compute behavior of legacy IBM Assembly Language code for a federal agency. The ultimate goal is to understand functionality and security vulnerabilities as a basis for code modernization. This paper reports on the first phase, to define functional semantics for IBM Assembly instructions and conduct behavior computation experiments.

reverse engineering↗

Selective posttranslational inhibition of Ca V β 1 -associated voltage-dependent calcium channels with a functionalized nanobody

Ca 2+ influx through high-voltage-activated calcium channels (HVACCs) controls diverse cellular functions. A critical feature enabling a singular signal, Ca 2+ influx, to mediate disparate functions is diversity of HVACC pore-forming α1 and auxiliary Ca V β 1 –Ca V β 4 subunits. Selective Ca V α 1 blockers have enabled deciphering their unique physiological roles. By contrast, the capacity to post-translationally inhibit HVACCs based on Ca V β isoform is non-existent. Conventional gene knockout/shRNA approaches do not adequately address this deficit owing to subunit reshuffling and partially overlapping functions of Ca V β isoforms. Here, we identify a nanobody (nb.E8) that selectively binds Ca V β 1 SH3 domain and inhibits Ca V β 1 -associated HVACCs by reducing channel surface density, decreasing open probability, and speeding inactivation. Functionalizing nb.E8 with Nedd4L HECT domain yielded Chisel-1 which eliminated current through Ca V β 1 -reconstituted Ca V 1/Ca V 2 and native Ca V 1.1 channels in skeletal muscle, strongly suppressed depolarization-evoked Ca 2+ influx and excitation-transcription coupling in hippocampal neurons, but was inert against Ca V β 2 -associated Ca V 1.2 in cardiomyocytes. The results introduce an original method for probing distinctive functions of ion channel auxiliary subunit isoforms, reveal additional dimensions of Ca V β 1 signaling in neurons, and describe a genetically-encoded HVACC inhibitor with unique properties.

60 APPLIED LIFE SCIENCES↗

Implementation and testing of physics-based pulverization model in BISON

This report summarizes lower length scale computational research conducted to improve the pulverization criterion for high-burnup UO 2 fuel in the BISON fuel performance code. This research was sponsored by the NEAMS program during FY22. Efforts to improve the model primarily focus on calculating the current pressure of bubbles in the high-burnup structure (HBS) region, as well as the critical bubble pressure at which pulverization occurs in the HBS. The phase-field model for predicting initial bubble pressure in the HBS was improved by implementing a more realistic model for defect production, and by coupling the phase-field model for inter-granular bubble evolution with the spatially-resolved cluster dynamics code Xolotl to simulate intra-granular fission gas evolution. An evolution equation for current bubble pressure was added to BISON, an improvement over the previous model that assumed that bubble pressure was static following HBS formation. To improve calculations of critical bubble pressure for pulverization, 3-D phase-field fracture simulations were performed, and a function for critical bubble pressure was fit—based on the simulation results—to replace the previous function, which had been determined using 2-D simulations. The impacts of these modifications to the existing pulverization assessment cases will be reported in the forthcoming engineering scale milestone on high-burnup UO 2 pulverization. A poromechanics-based approach was used to include the effect of bubble over pressurization on the stress state of the pellet at the engineering scale, and the initial strategy for integration of the pulverization criterion with pellet-scale mechanical degradation using a smeared cracking model was developed. This report also describes the initial research that was conducted to inform a forthcoming transient fission gas release (tFGR) model in BISON. Focusing on the fission gas release caused by pulverization of the outer pellet rim, a model for the amount of fission gas release was developed as a function of fuel porosity, bubble size, and fragment size. Implementation of this model in BISON and its impact of engineering-scale predictions will also be described in the aforementioned engineering-scale milestone on high-burnup UO 2 pulverization.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Critical node treatment in the analytic function expansion method for Pin Power Reconstruction

Pin Power Reconstruction (PPR) was implemented in PARCS using the eight term analytic function expansion method (AFEN). This method has been demonstrated to be both accurate and efficient. However, similar to all the methods involving analytic functions, such as the analytic node method (ANM) and AFEN for nodal solution, the use of AFEN for PPR also has potential numerical issue with critical nodes. The conventional analytic functions are trigonometric or hyperbolic sine or cosine functions with an angular frequency proportional to buckling. For a critic al node the buckling is zero and the sine functions becomes zero, and the cosine function become unity. In this case, the eight terms of the analytic functions are no longer distinguishable from ea ch other which makes their corresponding coefficients can no longer be determined uniquely. The mode flux distribution of critical node can be linear while the conventional analytic functions can only express a uniform distribution. If there is critical or near critical node in a plane, the reconstructed pin power distribution is often be shown negative or very large values using the conventional method. In this paper, we propose a new method to avoid the numerical problem wit h critical nodes which uses modified trigonometric or hyperbolic sine functions which are the ratio of trigonometric or hyperbolic sine and its angular frequency. If there are no critical or near critical nodes present, the new pin power reconstruction method with modified analytic functions are equivalent to the conventional analytic functions. The new method is demonstrated using the L336C5 benchmark problem. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Identifying Critical Infrastructure in Imagery Data Using Explainable Convolutional Neural Networks

To date, no method utilizing satellite imagery exists for detailing the locations and functions of critical infrastructure across the United States, making response to natural disasters and other events challenging due to complex infrastructural interdependencies. This paper presents a repeatable, transferable, and explainable method for critical infrastructure analysis and implementation of a robust model for critical infrastructure detection in satellite imagery. This model consists of a DenseNet-161 convolutional neural network, pretrained with the ImageNet database. The model was provided additional training with a custom dataset, containing nine infrastructure classes. The resultant analysis achieved an overall accuracy of 90%, with the highest accuracy for airports (97%), hydroelectric dams (96%), solar farms (94%), substations (91%), potable water tanks (93%), and hospitals (93%). Critical infrastructure types with relatively low accuracy are likely influenced by data commonality between similar infrastructure components for petroleum terminals (86%), water treatment plants (78%), and natural gas generation (78%). Local interpretable model-agnostic explanations (LIME) was integrated into the overall modeling pipeline to establish trust for users in critical infrastructure applications. The results demonstrate the effectiveness of a convolutional neural network approach for critical infrastructure identification, with higher than 90% accuracy in identifying six of the critical infrastructure facility types.

97 MATHEMATICS AND COMPUTING↗

Dispersion-enhanced sequential batch sampling for adaptive contour estimation

In computer simulation and optimal design, sequential batch sampling offers an appealing way to iteratively stipulate optimal sampling points based upon existing selections and efficiently construct surrogate modeling. Nonetheless, the issue of near duplicates poses tremendous quandary for sequential learning. It refers to the situation that selected critical points cluster together in each sampling batch, which are individually but not collectively informative towards the optimal design. Near duplicates severely diminish the computational efficiency as they barely contribute extra information towards update of the surrogate. To address this issue, we impose a dispersion criterion on concurrent selection of sampling points, which essentially forces a sparse distribution of critical points in each batch, and demonstrate the effectiveness of this approach in adaptive contour estimation. Specifically, we adopt Gaussian process surrogate to emulate the simulator, acquire variance reduction of the critical region from new sampling points as a dispersion criterion, and combine it with the modified expected improvement (EI) function for critical batch selection. The critical region here is the proximity of the contour of interest. This proposed approach is vindicated in numerical examples of a two-dimensional four-branch function, a four-dimensional function with a disjoint contour of interest and a time-delay dynamic system.

97 MATHEMATICS AND COMPUTING↗

Representing plant diversity in land models: An evolutionary approach to make “Functional Types” more functional

Plants are critical mediators of terrestrial mass and energy fluxes, and their structural and functional traits have profound impacts on local and global climate, biogeochemistry, biodiversity, and hydrology. Yet, Earth System Models (ESMs), our most powerful tools for predicting the effects of humans on the coupled biosphere-atmosphere system, simplify the incredible diversity of land plants into a handful of coarse categories of "Plant Functional Types" (PFTs) that often fail to capture ecological dynamics such as biome distributions. The inclusion of more realistic functional diversity is a recognized goal for ESMs, yet there is currently no consistent, widely accepted way to add diversity to models, that is, to determine what new PFTs to add and with what data to constrain their parameters. Here we review approaches to representing plant diversity in ESMs and draw on recent ecological and evolutionary findings to present an evolution-based functional type approach for further disaggregating functional diversity. Specifically, the prevalence of niche conservatism, or the tendency of closely related taxa to retain similar ecological and functional attributes through evolutionary time, reveals that evolutionary relatedness is a powerful framework for summarizing functional similarities and differences among plant types. We advocate that Plant Functional Types based on dominant evolutionary lineages ("Lineage Functional Types") will provide an ecologically defensible, tractable, and scalable framework for representing plant diversity in next-generation ESMs, with the potential to improve parameterization, process representation, and model benchmarking. We highlight how the importance of evolutionary history for plant function can unify the work of disparate fields to improve predictive modeling of the Earth system.

59 BASIC BIOLOGICAL SCIENCES↗

Tensor renormalization group approach to the $O(2)$ models via symmetry-twisted partition functions

We investigate critical phenomena in the $O(2)$ models using symmetry-twisted partition functions that can be efficiently computed within the tensor renormalization group framework. We first demonstrate, taking the three-dimensional model as an example, that symmetry-twisted partition functions detect the spontaneous breaking of global continuous symmetry. We then consider the same model in two dimensions, where the Berezinskii--Kosterlitz--Thouless (BKT) transition occurs. Since symmetry-twisted partition functions directly provide the helicity modulus at a finite twist angle, we determine the BKT transition point. These results are presented based on Ref.~\cite{Akiyama:2026dzg}. Finally, in addition to the original paper~\cite{Akiyama:2026dzg}, we apply this approach to the two-dimensional generalized $O(2)$ model and confirm that it successfully identifies the phase transitions between the ferromagnetic and nematic phases, as well as between the nematic and paramagnetic phases.

Akiyama, Shinichiro [Tsukuba U., CCS; Tokyo U., IC↗

Temperature dependent dielectric function and the E{sub 0} critical points of hexagonal GaN from 30 to 690 K

The complex dielectric function ε and the E{sub 0} excitonic and band-edge critical-point structures of hexagonal GaN are reported for temperatures from 30 to 690 K and energies from 0.74 to 6.42 eV, obtained by rotating-compensator spectroscopic ellipsometry on a 1.9 μm thick GaN film deposited on a c-plane (0001) sapphire substrate by molecular beam epitaxy. Direct inversion and B-splines in a multilayer-structure calculation were used to extract the optical properties of the film from the measured pseudodielectric function 〈ε〉. At low temperature sharp E{sub 0} excitonic and critical-point interband transitions are separately observed. Their temperature dependences were determined by fitting the data to the empirical Varshni relation and the phenomenological expression that contains the Bose-Einstein statistical factor.

36 MATERIALS SCIENCE↗

Evolving charge correlations in a hybrid model with both hydrodynamics and hadronic Boltzmann descriptions

Background: Correlations from charge correlation, known as charge balance functions, provide critical tests of the chemical evolution of matter in a heavy-ion collision. Comparisons of experimental balance functions with calculations from parametric descriptions of the final state suggest that the charge production in the earliest stages of a heavy-ion collision are consistent with having generated an amount of light up, down, and strange quarks that are largely consistent with expectations for creating a chemically equilibrate quark-gluon plasma. Purpose: This work describes a full simulation of the evolving correlations superimposed on a state-of-the-art microscopic description of the collision. Methods: The creation and diffusion of balancing charges is modeled on the background of a hybrid description of the evolution based on hydrodynamics, for when the matter’s temperature is above 155 MeV, and a microscopic hadronic simulation, for the breakup stage. The translation of the charge-charge correlation function, indexed by the flavors up, down, and strange, into correlations between specific hadron species is built on the assumption that differential charges enhance differential yields according to statistical equilibrium. Monte Carlo methods are implemented when applicable. Results: The charge balance functions are predicted for pairs indexed by charge alone or by whether the particle pairs are any combination of pions, kaons, or protons. We report comparisons with experiment are remarkably successful except for the proton-kaon balance functions. Conclusions: This demonstrates first that two-particle correlations from charge conservation can be calculated for a state-of-the-art model of the evolution with moderate amounts of computation. Aside from the magnitude of the proton-kaon correlations, the calculations well describe preliminary experimental results from the STAR Collaboration at the Relativistic Heavy Ion Collider. Ignoring the one disagreement, this suggests that the matter in a heavy-ion collision comes close to maintaining chemical equilibrium during the superhadronic stage of a heavy-ion collision.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Stability and Fidelity of Power-Hardware-in-the-Loop Using NREL's CGI

The presentation focuses on dynamic analysis of power hardware-in-the-loop (PHIL) experiments using National Renewable Energy Laboratory Flatirons Campus' grid simulator - 7MVA Controllable Grid Interface (CGI). A control diagram of typical PHIL experiment is described, and transfer functions of critical components are explained. An impedance-based definition of PHIL experiment bandwidth is defined using open loop transfer functions of the system. Further an example resistive divider circuit is introduced that is used to explain implication of PHIL on accuracy of simulation by comparing measured results against ideal expected signals. At the end the real-life PHIL simulation using Maui power system model is described showing various oscillation modes observed and discussing the meaning of these in context of dynamic bandwidth of simulation.

grid simulator↗

Taxonomic and functional restoration of tallgrass prairie soil microbial communities in comparison to remnant and agricultural soils

Abstract Restoring ecosystems requires the re-establishment of diverse soil microbial communities that drive critical ecosystem functions. In grasslands, restoration and management require the application of disturbances like fire and grazing. Disturbances can shape microbial taxonomic composition and potentially functional composition as well. We characterized taxonomic and functional gene composition of soil communities using whole genome shotgun metagenomic sequencing to determine how restored soil communities differed from pre-restoration agricultural soils and original remnant soils, how management affects soil microbes, and whether restoration and management affect the number of microbial genes associated with carbohydrate degradation. We found distinct differences in both taxonomic and functional diversity and composition among restored, remnant, and agricultural soils. Remnant soils had low taxonomic and functional richness and diversity, as well as distinct composition, indicating that restoration of agricultural soils does not re-create soil microbial communities that match remnants. Prescribed fire management increased functional diversity, which also was higher in more recently planted restorations. Finally, restored and post-fire soils included high abundances of genes encoding cellulose-degrading enzymes, so restorations and their ongoing management can potentially support functions important in carbon cycling.

Mason, Cayla N. (ORCID:0000000345983824)↗

Evaluating Function-as-a-Service (FaaS) frameworks for the Accelerator Control System

As particle accelerator control systems evolve in complexity and scale, the need for responsive, scalable, and cost-effective computational infrastructure becomes increasingly critical. Function-as-a-Service (FaaS) offers an alternative to traditional monolithic architecture by enabling event-driven execution, automatic scaling, and fine-grained resource utilization. This paper explores the applicability and performance of FaaS frameworks in the context of a modern particle accelerator control system, with the objective of evaluating their suitability for short lived and triggered workloads. In this paper, we evaluate prominent open-source FaaS platforms in executing functional logic, triggers, and diagnostics routines. Evaluation metrics consist of cold-start latency, scalability, performance, integration with other open-source tools like Kafka. Experimental workloads were designed to simulate real-world control tasks when implemented as stateless FaaS functions. These workloads were benchmarked under various invocation loads and network conditions. Self-hosted FaaS platforms, when deployed within accelerator networks, offer greater control over execution environment, better integration with legacy systems, and support for real-time guarantees when paired with message queues. Based on lessons learned and evaluation metrics, this paper describes reliability of the FaaS framework for the Accelerator Control Systems (ACS).

Jaikar, A. [Fermilab] (ORCID:0000000332046217)↗

Machine learning prediction of enzyme optimum pH

The relationship between pH and enzyme catalytic activity, especially the optimal pH (pH opt ) at which enzymes function, is critical for biotechnological applications. Hence, computational methods to predict pH opt will enhance enzyme discovery and design by facilitating accurate identification of enzymes that function optimally at specific pH levels, and by elucidating sequence-function relationships. Here, in this study, we proposed and evaluated various machine learning methods for predicting pH opt , conducting extensive hyperparameter optimization and training over 11,000 model instances. Our results demonstrate that models utilizing language model embeddings markedly outperform other methods in predicting pHopt. We present EpHod, the best-performing model, to predict pHopt, making it publicly available to researchers. From sequence data, EpHod directly learns structural and biophysical features that relate to pH opt , including proximity of residues to the catalytic centre and the accessibility of solvent molecules. Overall, EpHod presents a promising advancement in pH opt prediction and will potentially speed up the development of enzyme technologies.

97 MATHEMATICS AND COMPUTING↗

Prolonged warming and drought modify belowground interactions for water among coexisting plants

Understanding how climate alters plant-soil water dynamics, and its impact on physiological functions, is critical to improved predictions of vegetation responses to climate change. Here we analyzed how belowground interactions for water shift under warming and drought, and associated impacts on plant functions. In a semi-arid woodland, adult trees (piñon and juniper) and perennial grasses were exposed to warming and precipitation reduction. After six years of continuous treatment exposure, soil and plant water isotopic composition under natural- and tracer-conditions were measured to assess community-level water source partitioning and hydraulic redistribution. Warming and drought modified plant water uptake depths. Shifts in water uptake depths under warming resulted in reduced water source partitioning. Under drought, plants maintained similar water source partitioning among species compared to ambient conditions. Trees showed higher water stress, reduced water use and photosynthesis in response to warming and drought. No evidence of hydraulic redistribution was observed for any species independent of the treatments. This study demonstrates that coexisting plants can modulate their partitioning of water sources under prolonged warming and drought but these adjustments do not systematically mitigate climate extremes. Additionally, hydraulic redistribution is not necessarily a significant process compensating climate change impacts in this semi-arid ecosystem.

Grossiord, Charlotte↗