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At least 1,801 records · Page 100

Analysis of proton bunch parameters in the AWAKE experiment

A precise characterization of the incoming proton bunch parameters is required to accurately simulate the self-modulation process in the Advanced Wakefield Experiment (AWAKE). This paper presents an analysis of the parameters of the incoming proton bunches used in the later stages of the AWAKE Run 1 data-taking period. The transverse structure of the bunch is observed at multiple positions along the beamline using scintillating or optical transition radiation screens. The parameters of a model that describes the bunch transverse dimensions and divergence are fitted to represent the observed data using Bayesian inference. Finally, the analysis is tested on simulated data and then applied to the experimental data.

47 OTHER INSTRUMENTATION↗

Impact of confined geometries on hopping and trapping of motile bacteria in porous media

We use a random walk particle-tracking (RWPT) approach to elucidate the impact of porous media confinement and cell-cell interactions on bacterial transport. The model employs stochastic alternating motility states consisting of hopping movement and trapping reorientation. The stochastic motility patterns are defined based on direct visualization of individual trajectory data. We validate our model against experimental data, at single-cell resolution, of bacterial E. coli motion in three-dimensional confined porous media. Results show that the model is able to efficiently simulate the spreading dynamics of motile bacteria as it captures the impact of cell-cell interaction and pore confinement, which marks the transition to a late-time subdiffusive regime. Furthermore, the model is able to qualitatively reproduce the observed directional persistence. Lastly, our RWPT model constitutes a meshless simple method which is easy to implement and does not invoke ad hoc assumptions but represents the basis for a multiscale approach to the study of bacterial dispersal in porous systems.

54 ENVIRONMENTAL SCIENCES↗

Modeling Astrophysical Explosions and Nucleosynthesis (Final Technical Report)

The goal of this project was to further our theoretical understanding of the extreme physics and heavy element nucleosynthesis occurring in stellar explosions, in particular supernovae and neutron star mergers. To study these systems, we further developed and applied numerical simulations (radiation hydrodynamical models and nuclear reaction networks) run on high performance computers. The numerical calculations and companion theoretical analysis helped to better define the sites of astrophysical nucleosynthesis, and make predictions of the associated observables (nucleosynthetic yields and electromagnetic signals) that can be used to anticipate and interpret experimental data. This project enhances the scientific value of the nuclear data obtained from current and future experimental facilities (e.g., rare isotope beams) by improving our understanding of the astrophysical context and specific physical conditions under which we expect such reactions to take place in Nature.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Agilent AgileBioFoundry CRADA (Final Report)

The mission of this CRADA with Agilent was to couple powerful MS platforms (QQQ, IM-QTOF-MS) with Agilent’s novel Ultra-High-Performance Liquid Chromatography (UHPLC) fast metabolomic workflows and perform ABF Machine Learning (ML) to generated datasets. Agilent transferred UHPLC methods to PNNL and LBNL and methods were implemented and demonstrated in both labs, achieving total acquisition times of < 10 min. Metabolites analyzed using Agilent’s shared methods included metabolites from central carbon metabolism, common across hosts, and metabolites unique to engineered strains. Standards were acquired in an UHPLC-Drift Tube Ion Mobility Mass Spectrometer (DTIMS) system for the first time within the context of ABF and methods were optimized based on Agilent’s protocols. Samples from ABF hosts Pseudomonas putida, Aspergillus pseudoterreus, Aspergillus niger and Rhodosporidium toruloides were analyzed using the UHPLC-DTIMS platform for a total of 276 runs. A data analysis workflow compatible with the Experimental Data Depot (EDD) and completely shareable was developed for the acquired UHPLC-DTIMS data. Samples were analyzed using a Data Independent Acquisition Approach (DIA), which for most of the standards provided more transitions therefore increasing detection confidence. Using the data acquired by PNNL, LBNL, and Agilent’s specifications from previous ML projects, SNL applied an ensemble ML strategy to pick the best performing model for automated LC-method selection. Finally, with the contribution of the participant labs and Agilent, SNL developed an Automated Method Selection (AMS) software tool to predict the best liquid chromatography method for analysis of any new molecules of interest. Samples with novel pathways and new metabolite targets of interest are generated at a high pace in the ABF. Therefore, our accomplishment in this CRADA improved the efficiency and accuracy of strain testing by developing and implementing fast analytical methods, robust processing tools, and software for predicting the best methods for UHPLC analysis.

97 MATHEMATICS AND COMPUTING↗

Audible Noise Modeling of Hydrogen Release Sonic Hazards in Rail Maintenance Facilities

This study implemented validated literature models to predict audible noise due to pressurized gaseous hydrogen releases through a thermally-activated pressure relief device (TPRD) and attached vent stack. A literature survey discovered limited hydrogen-specific noise prediction models validated by experiments. However, empirical noise prediction models for air flowing through pipes and valves were identified. These empirical models were used to predict noise levels and compared against hydrogen noise data reported in two studies: one experimental study of noise from hydrogen leaking through a pipe and another which modeled hydrogen flowing through a solenoid valve during a fuel cell vehicle refueling. The valve flow model was then applied to predict noise for hydrogen releases through a TPRD. Results show that hydrogen releases through a TPRD can produce harmful noise levels varying from 134 to 150 dB. However, further model validation and additional experimental data are needed to improve prediction confidence and accuracy.

08 HYDROGEN↗

Development and implementation of high-throughput proteomic and metabolomics assays by using advanced chromatographic and mass spectrometric systems (CRADA Final Report)

The mission of this CRADA with Agilent was to couple powerful MS platforms (QQQ, IM-QTOFMS) with Agilent’s novel Ultra-High-Performance Liquid Chromatography (UHPLC) fast metabolomic workflows and perform ABF Machine Learning (ML) to generated datasets. Agilent transferred UHPLC methods to PNNL and LBNL and methods were implemented and demonstrated in both labs, achieving total acquisition times of < 10 min. Metabolites analyzed using Agilent’s shared methods included metabolites from central carbon metabolism, common across hosts, and metabolites unique to engineered strains. Standards were acquired in an UHPLC-Drift Tube Ion Mobility Mass Spectrometer (DTIMS) system for the first time within the context of ABF and methods were optimized based on Agilent’s protocols. Samples from ABF hosts Pseudomonas putida, Aspergillus pseudoterreus, Aspergillus niger and Rhodosporidium toruloides were analyzed using the UHPLC-DTIMS platform for a total of 276 runs. A data analysis workflow compatible with the Experimental Data Depot (EDD) and completely shareable was developed for the acquired UHPLC-DTIMS data. Samples were analyzed using a Data Independent Acquisition Approach (DIA), which for most of the standards provided more transitions therefore increasing detection confidence. Using the data acquired by PNNL, LBNL, and Agilent’s specifications from previous ML projects, SNL applied an ensemble ML strategy to pick the best performing model for automated LC-method selection. Finally, with the contribution of the participant labs and Agilent, SNL developed an Automated Method Selection (AMS) software tool to predict the best liquid chromatography method for analysis of any new molecules of interest. Samples with novel pathways and new metabolite targets of interest are generated at a high pace in the ABF. Overall, the project advanced rapid metabolomics by combining liquid chromatography, ion mobility spectrometry, and data-independent mass spectrometry with machine learning. This multidimensional approach uses retention time, collision cross-section, precursor mass, and fragment-ion information to distinguish chemically similar metabolites that can be difficult to resolve using conventional liquid- or gas-chromatography methods. The resulting workflow also provided automated metabolite-identification error estimates, addressing a recognized need for statistical confidence measures in metabolomics.

Petzold, Christopher [Lawrence Berkeley National L↗

Real-time simulation of F100-PW-100 turbofan engine using the hybrid computer

A real-time hybrid computer simulation of the F100-PW-100 augmented turbofan is presented. The digital portion of the hybrid computer is used to perform the bivariate function generation associated with modeling the performance of the engine's rotating components. The remaining calculations are performed on the analog computer. Steady state simulation data along with sea level, static, transient data are presented to show that the real-time simulation matches baseline digital simulation results over a wide range of power settings and flight conditions. Steady state simulation data are compared with sea level, experimental data to show that the real-time hybrid and baseline digital simulations do adequately predict the performance of the actual engine. FORTRAN listings and analog patching diagrams are provided.

Szuch, J. R.↗

Prediction of unsuppressed jet engine exhaust noise in flight from static data

A methodology developed for predicting in-flight exhaust noise from static data is presented and compared with experimental data for several unsuppressed turbojet engines. For each engine, static data over a range of jet velocities are compared with the predicted jet mixing noise and shock-cell noise. The static engine noise over and above the jet and shock noises is identified as excess noise. The excess noise data are then empirically correlated to smooth the spectral and directivity relations and account for variations in test conditions. This excess noise is then projected to flight based on the assumption that the only effects of flight are a Doppler frequency shift and a level change given by 40 log (1 - m sub 0 cos theta), where M sub 0 is the flight Mach number and theta is the observer angle relative to the jet axis.

Stone, J. R.↗

Dataflow computing approach in high-speed digital simulation

New computational tools and methodologies for the digital simulation of continuous systems were explored. Programmability, and cost effective performance in multiprocessor organizations for real time simulation was investigated. Approach is based on functional style languages and data flow computing principles, which allow for the natural representation of parallelism in algorithms and provides a suitable basis for the design of cost effective high performance distributed systems. The objectives of this research are to: (1) perform comparative evaluation of several existing data flow languages and develop an experimental data flow language suitable for real time simulation using multiprocessor systems; (2) investigate the main issues that arise in the architecture and organization of data flow multiprocessors for real time simulation; and (3) develop and apply performance evaluation models in typical applications.

Ercegovac, M. D.↗

Prediction of helicopter rotor discrete frequency noise: A computer program incorporating realistic blade motions and advanced acoustic formulation

A computer program has been developed at the Langley Research Center to predict the discrete frequency noise of conventional and advanced helicopter rotors. The program, called WOPWOP, uses the most advanced subsonic formulation of Farassat that is less sensitive to errors and is valid for nearly all helicopter rotor geometries and flight conditions. A brief derivation of the acoustic formulation is presented along with a discussion of the numerical implementation of the formulation. The computer program uses realistic helicopter blade motion and aerodynamic loadings, input by the user, for noise calculation in the time domain. A detailed definition of all the input variables, default values, and output data is included. A comparison with experimental data shows good agreement between prediction and experiment; however, accurate aerodynamic loading is needed.

Brentner, K. S.↗

A viscoplastic theory applied to copper

A phenomenologically based viscoplastic model is derived for copper. The model is thermodynamically constrained by the condition of material dissipativity. Two internal state variables are considered. The back stress accounts for strain-induced anisotropy, or kinematic hardening. The drag stress accounts for isotropic hardening. Static and dynamic recovery terms are not coupled in either evolutionary equation. The evolution of drag stress depends on static recovery, while the evolution of back stress depends on dynamic recovery. The material constants are determined from isothermal data. Model predictions are compared with experimental data for thermomechanical test conditions. They are in good agreement at the hot end of the loading cycle, but the model overpredicts the stress response at the cold end of the cycle.

Freed, Alan D.↗

Blade-vortex interaction noise predictions using measured blade surface pressures

The generation of helicopter noise by blade-vortex interactions during descent under impulsive conditions is investigated analytically. A noise-prediction technique is developed on the basis of the dipole source term of the Ffowcs-Williams/Hawkings equation and applied to data from simultaneous blade-pressure and acoustic measurements obtained by Cowan et al. (1986) on a 10-ft-diameter 4-blade rotor model in a wind tunnel. Preliminary results show that input-blade-airload azimuth resolution of 1 deg or better and computational azimuth step size of 2 deg or less are required to achieve good agreement between predicted and recorded acoustic time histories. The need for more sophisticated methods to model chordwise input data and for a more extensive experimental data base is indicated.

Ziegenbein, Perry R.↗

Modeling of the heat transfer in bypass transitional boundary-layer flows

A low Reynolds number k-epsilon turbulence model and conditioned momentum, energy and turbulence equations were used to predict bypass transition heat transfer on a flat plate in a high-disturbance environment with zero pressure gradient. The use of conditioned equations was demonstrated to be an improvement over the use of the global-time-averaged equations for the calculation of velocity profiles and turbulence intensity profiles in the transition region of a boundary layer. The approach of conditioned equations is extended to include heat transfer and a modeling of transition events is used to predict transition onset and the extent of transition on a flat plate. The events, which describe the boundary layer at the leading edge, result in boundary-layer regions consisting of: (1) the laminar, (2) pseudolaminar, (3) transitional, and (4) turbulent boundary layers. The modeled transition events were incorporated into the TEXSTAN 2-D boundary-layer code which is used to numerically predict the heat transfer. The numerical predictions in general compared well with the experimental data and revealed areas where additional experimental information is needed.

Simon, Frederick F.↗

Solution of nonlinear flow equations for complex aerodynamic shapes

Solution-adaptive CFD codes based on unstructured methods for 3-D complex geometries in subsonic to supersonic regimes were investigated, and the computed solution data were analyzed in conjunction with experimental data obtained from wind tunnel measurements in order to assess and validate the predictability of the code. Specifically, the FELISA code was assessed and improved in cooperation with NASA Langley and Imperial College, Swansea, U.K.

Djomehri, M. Jahed↗

Determination of blade-to-coolant heat-transfer coefficients on a forced-convection, water-cooled, single-stage turbine

Blade-to-coolant convective heat-transfer coefficients were obtained on a forced-convection water-cooled single-stage turbine over a large laminar flow range and over a portion of the transition range between laminar and turbulent flow. The convective coefficients were correlated by the general relation for forced-convection heat transfer with laminar flow. Natural-convection heat transfer was negligible for this turbine over the Grashof number range investigated. Comparison of turbine data with stationary tube data for the laminar flow of heated liquids showed good agreement. Calculated average midspan blade temperatures using theoretical gas-to-blade coefficients and blade-to-coolant coefficients from stationary-tube data resulted in close agreement with experimental data.

COOLING - GAS TURBINE SYSTEMS↗

Unsteady Phenomena in Shock Wave/Boundary Layer Interaction

A brief review is given of the unsteadiness of shock wave/turbulent boundary layer interaction. The focus is on interactions generated by swept and unswept compression ramps, by flares, steps and incident shock waves, by cylinders and blunt fins, and by glancing shock waves. The effects of Mach number, Reynolds number, and separated flow scale are discussed as are the physical causes of the unsteadiness. The implications that the unsteadiness has for interpreting time-average surface and flowfield data, and for comparisons of such experimental data with computation, is also briefly discussed. Finally, some suggestions for future work are given. It is clear that there are large gaps in the data base and that many aspects of such phenomena are poorly understood. Much work remains to be done.

Dolling, D. S.↗

Wireless Network Simulation in Aircraft Cabins

An electromagnetic propagation prediction tool was used to predict electromagnetic field strength inside airplane cabins. A commercial software package, Wireless Insite, was used to predict power levels inside aircraft cabins and the data was compared with previously collected experimental data. It was concluded that the software could qualitatively predict electromagnetic propagation inside the aircraft cabin environment.

Beggs, John H.↗

Of mice and genes: evolution of vertebrate brain development

In this review the current understanding of genetic and molecular evolution of development, in particular the formation of the major axis of bilateral animals, is critically evaluated, and the early pattern formation in the hindbrain is related as much as possible to these processes. On the genetic level it is proposed that the exuberant multiplication of regulatory genes compared to that of structural genes relates to the increased flexibility of early vertebrate development. In comparisons to fruit flies, many conserved genes are found to be expressed very differently, while many others seem to reflect a comparable pattern and thus suggest a conservation of function. Even genes with a largely conserved pattern of expression may change the level at which they are expressed and the mechanisms by which they are regulated in their expression. Evolution and development of hindbrain motoneurons is reviewed, and it is concluded that both comparative data as well as more recent experimental data suggest a limited importance for the rhombomeres. Clearly, many cell fate-specifying processes work below the level of rhombomeres or in the absence of rhombomeres. It is suggested that more comparative developmental data are needed to establish firmly the relationship between homeobox genes and rhombomere specification in vertebrates other than a few model species.

NASA Discipline Developmental Biology↗

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