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At least 1,801 records · Page 100

PCMDI PMP Interactive Visualization Web Page, Atmospheric River Metrics

We present an open-source Python-based framework that can be used for objective evaluation of Atmospheric Rivers (ARs) in climate models. With a comprehensive pool of pre-defined metrics, this package is useful for systematic AR evaluation across a range of model simulations, such as the MIPs in CMIP5/6 models and large ensemble experiments.

Dong, Bo↗

Dashboard for Visualizing Molecular Property Prediction Machine Learning Results

This is a dashboard for exploring the results of machine learning models for predicting molecular properties from molecular structure. It includes tools for: 1. Modifying molecules to observe the change in predicted properties 2. Exploring the relationship between molecular structure and predicted properties 3. Recommending structurally similar molecules with improved properties 4. Exploring the impact of data subsampling on model performance metrics

Xu, Audrey↗

Visual Style Elements in Human–System Interface Design for Nuclear Power Operations: Does Style Affect Performance and Preference?

As the world increasingly adopts renewable and sustainable energy systems, transitionary solutions include nuclear power, which currently provides 20% of the United States’ electricity and is the largest single source of carbon-free electricity generation. Advanced reactors are a critical component of a carbon-free mixed energy portfolio that require careful design of first-of-a-kind control rooms. The application of Human Factors Engineering (HFE) is essential for scientific and iterative testing of novel human–system interface (HSI) concepts to ensure effective, efficient, and safe plant operations. Microworlds are simulators that use simplified physics models and control systems to distill nuclear power operations into essential functions. HFE scientists used the Rancor Microworld Simulator to obtain preference and performance metrics for novel and traditional static HSI design styles. Participants comprised advanced reactor company employees and nuclear industry consultants. A mixture of quantitative and qualitative data was captured. There was a preference for the basic graphical style that included high contrast and traditional color scheme elements. No single HSI design outperformed the others, and the participants did not perform better using their preferred HSI style. We report this experiment is the first in a series of HFE testing for HSIs in advanced reactor control room development. Clear user preferences emerged for elements within static displays. The cutting-edge neumorphic style was the least preferred. Future directions include tests of dynamic displays. HFE is used in evaluating and designing HSI devices that will improve the efficiency and safety of advanced nuclear power operations.

99 GENERAL AND MISCELLANEOUS↗

Phage Eco-Locator: a web tool for visualization and analysis of phage genomes in metagenomic data sets

Bacteriophages, viruses that infect bacteria, are the most abundant biological entities on our planet, and their nucleic acids constitute a substantial proportion of total DNA in Earth’s ecosystems. While the advent of metagenomic methods has allowed the rapid and efficient investigation of microbial and viral communities, there has not been a comprehensive comparative analysis of phage genes and genomes present in all sequenced ecosystems. To examine the abundance and distribution of phage genes in environmental metagenomic sequences, we developed a web-based tool, Phage Eco-Locator [http://www.phantome.org/eco-locator] that screens all publicly available sequenced metagenomes for a user-defined phage genome, or all phage genomes within a user-selected metagenomic sample.

59 BASIC BIOLOGICAL SCIENCES↗

Concept of Operations for Data Fusion Visualization

Situational awareness in the operations and supervision of a industrial system means that decision making entity, whether machine or human, have the important data presented in a timely manner. An optimal presentation of information such that the operator has the best opportunity accurately interpret and react to anomalies due to system degradation, failures or adversaries. Anticipated problems are a matter for system design; however, the paper will focus on concepts for situational awareness enhancement for a human operator when the unanticipated or unaddressed event types occur. Methodology for human machine interface development and refinement strategy is described for a synthetic fuels plant model. A novel concept for adaptively highlighting the most interesting information in the system and a plan for testing the methodology is described.

10 SYNTHETIC FUELS↗

Visualizing red blood cell sickling and the effects of inhibition of sphingosine kinase 1 using soft X-ray tomography

ABSTRACT Sickle cell disease is a destructive genetic disorder characterized by the formation of fibrils of deoxygenated hemoglobin, leading to the red blood cell (RBC) morphology changes that underlie the clinical manifestations of this disease. Using cryogenic soft X-ray tomography (SXT), we characterized the morphology of sickled RBCs in terms of volume and the number of protrusions per cell. We were able to identify statistically a relationship between the number of protrusions and the volume of the cell, which is known to correlate to the severity of sickling. This structural polymorphism allows for the classification of the stages of the sickling process. Recent studies have shown that elevated sphingosine kinase 1 (Sphk1)-mediated sphingosine 1-phosphate production contributes to sickling. Here, we further demonstrate that compound 5C, an inhibitor of Sphk1, has anti-sickling properties. Additionally, the variation in cellular morphology upon treatment suggests that this drug acts to delay the sickling process. SXT is an effective tool that can be used to identify the morphology of the sickling process and assess the effectiveness of potential therapeutics.

59 BASIC BIOLOGICAL SCIENCES↗

Ultrafast visualization of phase transitions in nonequilibrium warm dense matter

Intense ultrafast laser excitation brings materials into highly nonequilibrium states with complex solid–liquid phase transitions. These ultrafast processes yield warm dense matter (WDM) conditions characterized by comparable thermal and Fermi energies, and strong ion–ion coupling. Here, we review recent studies employing mega-electron-volt ultrafast electron diffraction to resolve the structural dynamics of nonequilibrium WDM created by femtosecond laser heating of solids. Furthermore, for the study of warm dense gold, the results showed homogeneous melting that occurs within tens of picoseconds at absorbed energy densities of 0.4–1.4 MJ/kg. These results constrained the electron–ion coupling rate and revealed the melting sensitivity to nucleation seeds. For the study of radiation-damaged tungsten, the results showed a melting transition below the melting temperature. Molecular dynamics simulations suggested that this melting behavior is driven by vacancy defect clusters from radiation damage. These studies provided atomic-level insights into the melting behavior of materials under extreme conditions.

36 MATERIALS SCIENCE↗

Final Report - Facilitating Wind Energy: Addressing Challenges around Visual Impacts, Noise, Credible Data, and Local Benefits through Creative Stakeholder Engagement

The project team consisting of the Consensus Building Institute, Inc., Raab Associates, Ltd., and the MIT-Harvard Program on Negotiation created a model and set of tools for building the capacity of state officials to effectively collaborate with diverse stakeholders in advancing wind development policy formation, wind facility siting, and transmission policy and siting. The model was used to enhance the ability of state officials to advance wind development in their states. Training was delivered in Cambridge, MA, in Spring 2011. The training and associated materials, including a Wind Energy Workbook, website, and simulations, is available for ongoing and widespread dissemination throughout the US.

17 WIND ENERGY↗

GPGPU Computing and Visualization on GPUs at LANL

DC is launching a new program to recognize noteworthy achievements made by users using High Performance Computing (HPC) technologies. The program’s main goals are to: • Showcase success stories involving HPC in science and industry • Help other users better understand the benefits of adopting HPC and justify HPC investments, especially for SMBs • Demonstrate the value of HPC to funding bodies • Expand public support for increased HPC investments.

97 MATHEMATICS AND COMPUTING↗

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