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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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All sourcesNASA NTRSDOE OSTI
DOE OSTI2018

Slycat™ User Manual

Slycat™ is a web-based system for performing data analysis and visualization of potentially large quantities of remote, high-dimensional data. Slycat™ specializes in working with ensemble data. An ensemble is a group of related data sets, which typically consists of a set of simulation runs exploring the same problem space. An ensemble can be thought of as a set of samples within a multi-variate domain, where each sample is a vector whose value defines a point in high-dimensional space. To understand and describe the underlying problem being modeled in the simulations, ensemble analysis looks for shared behaviors and common features across the group of runs. Additionally, ensemble analysis tries to quantify differences found in any members that deviate from the rest of the group. The Slycat™ system integrates data management, scalable analysis, and visualization. Results are viewed remotely on a user’s desktop via commodity web clients using a multi-tiered hierarchy of computation and data storage, as shown in Figure 1. Our goal is to operate on data as close to the source as possible, thereby reducing time and storage costs associated with data movement. Consequently, we are working to develop parallel analysis capabilities that operate on High Performance Computing (HPC) platforms, to explore approaches for reducing data size, and to implement strategies for staging computation across the Slycat™ hierarchy. Within Slycat™, data and visual analysis are organized around projects, which are shared by a project team. Project members are explicitly added, each with a designated set of permissions. Although users sign-in to access Slycat™, individual accounts are not maintained. Instead, authentication is used to determine project access. Within projects, Slycat™ models capture analysis results and enable data exploration through various visual representations. Although for scientists each simulation run is a model of real-world phenomena given certain conditions, we use the term model to refer to our modeling of the ensemble data, not the physics. Different model types often provide complementary perspectives on data features when analyzing the same data set. Each model visualizes data at several levels of abstraction, allowing the user to range from viewing the ensemble holistically to accessing numeric parameter values for a single run. Bookmarks provide a mechanism for sharing results, enabling interesting model states to be labeled and saved.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2024

ELECTRONIC STRUCTURE METHODS AND PROTOCOLS WITH APPLICATION TO DYNAMICS, KINETICS AND THERMOCHEMISTRY

Hydrocarbon combustion involves the reaction dynamics of a tremendous number of species beginning with many-component fuel mixtures and proceeding via a complex system of intermediates to form primary and secondary products. Combustion conditions corresponding to new advanced engines and/or alternative fuels rely increasingly on autoignition and low-temperature-combustion chemistry. In these regimes various transient radical species such as HO2, ROO·, ·QOOH, HCO, NO2, HOCO, and Criegee intermediates play important roles in determining the detailed as well as more general dynamics. A clear understanding and accurate representation of these processes is needed for effective modeling. Given the difficulties associated with making reliable experimental measurements of these systems, computation can play an important role in developing these energy technologies. Accurate calculations have their own challenges since even within the simplest dynamical approximations such as transition state theory, the rates depend exponentially on critical barrier heights and these may be sensitive to the level of quantum chemistry. Moreover, it is well-known that in many cases it is necessary to go beyond statistical theories and consider the dynamics. Quantum tunneling, resonances, radiative transitions, and non-adiabatic effects governed by spin-orbit or derivative coupling can be determining factors in those dynamics. Building upon progress made during a period of prior support through the DOE Early Career Program, this project combines developments in the areas of potential energy surface (PES) fitting and multistate multireference quantum chemistry to allow spectroscopically and dynamically/kinetically accurate investigations of key molecular systems (such as those mentioned above), many of which are radicals with strong multireference character and have the possibility of multiple electronic states contributing to the observed dynamics. An ongoing area of investigation is to develop general strategies for robustly convergent electronic structure theory for global multichannel reactive surfaces including diabatization of energy and other relevant surfaces such as dipole transition. Combining advances in ab initio methods with automated interpolative PES fitting allows the construction of high-quality PESs (incorporating thousands of high-level data) to be done rapidly through parallel processing on high-performance computing (HPC) clusters. In addition, new methods and approaches to electronic structure theory will be developed and tested through applications. This project will explore limitations in traditional multireference calculations (e.g., MRCI) such as those imposed by internal contraction, lack of high-order correlation treatment and poor scaling. Methods such as DMRG-based extended active-space CASSCF and various Quantum Monte Carlo (QMC) methods will be applied (including VMC/DMC and FCIQMC). Insight into the relative significance of different orbital spaces and the robustness of application of these approaches on leadership class computing architectures will be gained. Synergy with other components of this research program such as automated PES fitting and multireference quantum chemistry will be used to address challenges encountered by the standard approaches to computational thermochemistry (those being single-reference quantum chemistry and perturbative treatments of the anharmonic vibrational energy, which break down for some cases of electronic structure or floppy strongly coupled vibrational modes).

74 ATOMIC AND MOLECULAR PHYSICS↗
DOE OSTI2020

A fast particle-based approach for calibrating a 3-D model of the Antarctic ice sheet

We consider the scientifically challenging and policy-relevant task of understanding the past and projecting the future dynamics of the Antarctic ice sheet. The Antarctic ice sheet has shown a highly nonlinear threshold response to past climate forcings. Triggering such a threshold response through anthropogenic greenhouse gas emissions would drive drastic and potentially fast sea level rise with important implications for coastal flood risks. Previous studies have combined information from ice sheet models and observations to calibrate model parameters. These studies have broken important new ground but have either adopted simple ice sheet models or have limited the number of parameters to allow for the use of more complex models. These limitations are largely due to the computational challenges posed by calibration as models become more computationally intensive or when the number of parameters increases. Here, we propose a method to alleviate this problem: a fast sequential Monte Carlo method that takes advantage of the massive parallelization afforded by modern high-performance computing systems. We use simulated examples to demonstrate how our sample-based approach provides accurate approximations to the posterior distributions of the calibrated parameters. The drastic reduction in computational times enables us to provide new insights into important scientific questions, for example, the impact of Pliocene era data and prior parameter information on sea level projections. These studies would be computationally prohibitive with other computational approaches for calibration such as Markov chain Monte Carlo or emulation-based methods. We also find considerable differences in the distributions of sea level projections when we account for a larger number of uncertain parameters. For example, based on the same ice sheet model and data set, the 99th percentile of the Antarctic ice sheet contribution to sea level rise in 2300 increases from 6.5 m to 13.1 m when we increase the number of calibrated parameters from three to 11. With previous calibration methods, it would be challenging to go beyond five parameters. Here, this work provides an important next step toward improving the uncertainty quantification of complex, computationally intensive and decision-relevant models.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Multi-threaded Sparse Matrix Sparse Matrix Multiplication for Many-Core and GPU Architectures.

Sparse Matrix-Matrix multiplication is a key kernel that has applications in several domains such as scientific computing and graph analysis. Several algorithms have been studied in the past for this foundational kernel. In this paper, we develop parallel algorithms for sparse matrix- matrix multiplication with a focus on performance portability across different high performance computing architectures. The performance of these algorithms depend on the data structures used in them. We compare different types of accumulators in these algorithms and demonstrate the performance difference between these data structures. Furthermore, we develop a meta-algorithm, kkSpGEMM, to choose the right algorithm and data structure based on the characteristics of the problem. We show performance comparisons on three architectures and demonstrate the need for the community to develop two phase sparse matrix-matrix multiplication implementations for efficient reuse of the data structures involved.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2016

Modeling primary atomization of liquid fuels using a multiphase DNS/LES Approach

We report on the development of a model framework to simulate spray flames from direct injection of liquid fuel into an automotive cylinder engine. The approach to this challenging problem was twofold. On one hand, the interface-capturing multiphase computer code CLSVOF was used to resolve the rapidly evolving, topologically convoluted interfaces that separate the liquid fuel from the gas at injection: the main challenges to address were the treatment of the high-pressure flow inside the injector, which required the inclusion of compressibility effects; and the computational framework necessary to achieve a Direct Numerical Simulation (DNS) level of accuracy. On the other hand, the scales of turbulent fuel mixing and combustion in the cylinder engine were ad- dressed by the high-performance computer code RAPTOR within the Large Eddy Simulation (LES) framework. To couple the two computational methods, a novel methodology was developed to describe the dense spray dynamics in Raptor from the assigned spray size distribution and dispersion angle derived from CLSVOF. This new, independent Eulerian Multi-Fluid (EMF) spray module was developed based on the kinetic description of a system of droplets as a pressure-less gas; as we will show, it was demonstrated to efficiently render the near-nozzle coupling in mass, momentum, and energy with the carrier gas phase.

02 PETROLEUM↗
DOE OSTI2023

5G Energy FRAME: The Design and Implementation of Data, Model, and Use Case (Year 2 Report)

This report summarizes the Year 2 work of Pacific Northwest National Laboratory’s (PNNL’s) 5G Fabricated Resource and Asset Management Encompassment for energy infrastructure (Energy FRAME) project funded by the Department of Energy Office of Science’s Advanced Scientific Computing Research (ASCR) Program. In this report, newest 5G equipment testing results are presented, along with two 5G-enabled AI/ML examples for grid applications; in addition, the work flow of grid edge, cloud, and High Performance Computing (HPC) platform is introduced, to support and interface the cross-domain simulation for power system transmission, distribution, and communication networks. Last but not least, the outlook for Year 3 work and the overarching impact of 5G Energy FRAME work to a multitude of stakeholders are provided. Additional 5G performance data now is shared through the publicly available weblink, https://www.pnnl.gov/projects/5g-energy-frame/publications

24 POWER TRANSMISSION AND DISTRIBUTION↗
NASA NTRS2010

Utilization of Hydrologic Remote Sensing Data in Land Surface Modeling and Data Assimilation: Current Status and Challenges

Recent advances in remote sensing technologies have enabled the monitoring and measurement of the Earth's land surface at an unprecedented scale and frequency. The myriad of these land surface observations must be integrated with the state-of-the-art land surface model forecasts using data assimilation to generate spatially and temporally coherent estimates of environmental conditions. These analyses are of critical importance to real-world applications such as agricultural production, water resources management and flood, drought, weather and climate prediction. This need motivated the development of NASA Land Information System (LIS), which is an expert system encapsulating a suite of modeling, computational and data assimilation tools required to address challenging hydrological problems. LIS integrates the use of several community land surface models, use of ground and satellite based observations, data assimilation and uncertainty estimation techniques and high performance computing and data management tools to enable the assessment and prediction of hydrologic conditions at various spatial and temporal scales of interest. This presentation will focus on describing the results, challenges and lessons learned from the use of remote sensing data for improving land surface modeling, within LIS. More specifically, studies related to the improved estimation of soil moisture, snow and land surface temperature conditions through data assimilation will be discussed. The presentation will also address the characterization of uncertainty in the modeling process through Bayesian remote sensing and computational methods.

Kumar, Sujay V.↗
DOE OSTI2021

HAM: Hotspot-Aware Manager for Improving Communications with 3D-Stacked Memory

merging High-Performance Computing (HPC) workloads, such as graph analytics, machine learning, and big data science, are data-intensive. Data-intensive workloads usually present fine-grained memory accesses with limited or no data locality, and thus incur frequent cache misses and low utilization of memory bandwidth. 3D-stacked memory devices such as Hybrid Memory Cube (HMC) and High Bandwidth Memory (HBM) can provide significantly higher bandwidth than conventional memory modules. However, the traditional interfaces and optimization methods for JEDEC DDR devices do not allow to fully exploit the potential performance of 3D-stacked memory with the massive amount of irregular memory accesses of data-intensive applications. In this paper, we propose a novel Hotspot-Aware Manager (HAM) infrastructure for 3D-stacked memory devices capable of optimizing memory access streams via request aggregation, hotspot detection, and in-memory prefetching. %and an associated hotspot-aware page policy. We present the HAM design and implementation, and simulate it on a system using RISC-V embedded cores with attached HMC devices. We extensively evaluate HAM with over 12 benchmarks and applications representing diverse irregular memory access patterns. The results show that, on average, HAM reduces redundant requests by 37.51\% and increases the prefetch buffer hit rate by 4.2 times, compared to a baseline streaming prefetcher. On the selected benchmark set, HAM provides performance gains of 21.81\% in average (up to 34.28\%) and power savings of 35.07\% over a standard 3D-stacked memory.

Wang, Xi↗
DOE OSTI2018

Multithreaded sparse matrix-matrix multiplication for many-core and GPU architectures

Sparse matrix-matrix multiplication is a key kernel that has applications in several domains such as scientific computing and graph analysis. Several algorithms have been studied in the past for this foundational kernel. In this work, we develop parallel algorithms for sparse matrix-matrix multiplication with a focus on performance portability across different high performance computing architectures. The performance of these algorithms depend on the data structures used in them. We compare different types of accumulators in these algorithms and demonstrate the performance difference between these data structures. Furthermore, we develop a meta-algorithm, kkSpGEMM, to choose the right algorithm and data structure based on the characteristics of the problem. We show performance comparisons on three architectures and demonstrate the need for the community to develop two phase sparse matrix-matrix multiplication implementations for efficient reuse of the data structures involved.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2026

Distributed Resilience in High-Energy Physics Data Acquisition

Historical experience in the High-Performance Computing community teaches us that as computing systems grow, the instance of failures goes from rare to a regular occurrence. A survey of the growth in the size and complexity of Data AcQuisition (DAQ) networks in High-Energy Physics (HEP) experiments reveals that these networks are scaling exponentially, trending to a point where automated fault handling should be considered over the current manual practice, especially given the rarity of data such as in DUNE's mission to observe core-collapse supernovae. We propose a general system, DiDAQt, which is designed to provide fault detection and handling in HEP DAQs specifically, through MPI-like primitives that allow it to be added easily to existing systems. We evaluate the scalability and response time of a prototype on the FABRIC national testbed, with results indicating sufficient scalability for current and near-future DAQs as well as practical response times (under 1 microsecond decision time).

Wolosewicz, A. [IIT, Chicago]↗
NASA NTRS1993

Research and Development Annual Report, 1992

Issued as a companion to Johnson Space Center's Research and Technology Annual Report, which reports JSC accomplishments under NASA Research and Technology Operating Plan (RTOP) funding, this report describes 42 additional JSC projects that are funded through sources other than the RTOP. Emerging technologies in four major disciplines are summarized: space systems technology, medical and life sciences, mission operations, and computer systems. Although these projects focus on support of human spacecraft design, development, and safety, most have wide civil and commercial applications in areas such as advanced materials, superconductors, advanced semiconductors, digital imaging, high density data storage, high performance computers, optoelectronics, artificial intelligence, robotics and automation, sensors, biotechnology, medical devices and diagnosis, and human factors engineering.

Source record↗
NASA NTRS1994

The JSC Research and Development Annual Report 1993

Issued as a companion to Johnson Space Center's Research and Technology Annual Report, which reports JSC accomplishments under NASA Research and Technology Operating Plan (RTOP) funding, this report describes 47 additional projects that are funded through sources other than the RTOP. Emerging technologies in four major disciplines are summarized: space systems technology, medical and life sciences, mission operations, and computer systems. Although these projects focus on support of human spacecraft design, development, and safety, most have wide civil and commercial applications in areas such as advanced materials, superconductors, advanced semiconductors, digital imaging, high density data storage, high performance computers, optoelectronics, artificial intelligence, robotics and automation, sensors, biotechnology, medical devices and diagnosis, and human factors engineering.

Source record↗
NASA NTRS2018

Scale-Resolving Simulations of Low-Pressure Turbine Cascades with Wall Roughness Using A Spectral-Element Method

The accurate prediction of wall-roughness effects in turbomachinery is becoming critical as turbine designers address airfoil surface quality and degradation concerns arising from the shift to advanced ceramic matrix composite (CMC) or additively-manufactured airfoils operating in higher temperature environments. In this paper, a recently developed computational capability for accurate and efficient scale-resolving simulations of turbomachinery is extended to analyze the boundary- layer separation and transition characteristics in a rough-wall low-pressure turbine (LPT) cascade. The computational capability is based on an entropy-stable discontinuous-Galerkin spectral-element approach that extends to arbitrarily high orders of spatial and temporal accuracy, and is implemented in an efficient manner for a modern high performance computer architecture. Results from the scale-resolving simulations of both smooth and rough airfoil cascades are presented and compared to previous experiments and numerical simulations. The results show that the suction surface boundary layer undergoes laminar separation, transition, and turbulent reattachment for the smooth airfoil cascade, while in the presence of roughness the separation and transition behavior of the suction surface boundary layer is substantially modified. The differences between the smooth and rough airfoil cascades are then highlighted by a detailed analysis of their respective turbulent flow fields.

Spectral-Element↗
DOE OSTI2013

Fortran Transformational Tools in Support of Scientific Application Development for Petascale Computer Architectures

This document is the final report for a multi-year effort building infrastructure to support tool development for Fortran programs. We also investigated static analysis and code transformation methods relevant to scientific programmers who are writing Fortran programs for petascale-class high performance computing systems. This report details our accomplishments, technical approaches, and provides information on where the research results and code may be obtained from an open source software repository. The report for the first year of the project that was performed at the University of Oregon prior to the PI moving to Galois, Inc. is included as an appendix.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

The Locus Algorithm III: A Grid Computing system to generate catalogues of optimised pointings for Differential Photometry

This paper discusses the hardware and software components of the Grid Computing system used to implement the Locus Algorithm to identify optimum pointings for differential photometry of 61,662,376 stars and 23,799 quasars. The scale of the data, together with initial operational assessments demanded a High Performance Computing (HPC) system to complete the data analysis. Grid computing was chosen as the HPC solution as the optimum choice available within this project. The physical and logical structure of the National Grid computing Infrastructure informed the approach that was taken. That approach was one of layered separation of the different project components to enable maximum flexibility and extensibility.

Creaner, Oisń↗
DOE OSTI2019

Applying Machine Learning to Understand Write Performance of Large-scale Parallel Filesystems

In high-performance computing (HPC), I/O performance prediction offers the potential to improve the efficiency of scientific computing. In particular, accurate prediction can make runtime estimates more precise, guide users toward optimal checkpoint strategies, and better inform facility provisioning and scheduling policies. HPC I/O performance is notoriously difficult to predict and model, however, in large part because of inherent variability and a lack of transparency in the behaviors of constituent storage system components. In this work we seek to advance the state of the art in HPC I/O performance prediction by (1) modeling the mean performance to address high variability, (2) deriving model features from write patterns, system architecture and system configurations, and (3) employing Lasso regression model to improve model accuracy. We demonstrate the efficacy of our approach by applying it to a crucial subset of common HPC I/O motifs, namely, file-per-process checkpoint write workloads. We conduct experiments on two distinct production HPC platforms—Titan at the Oak Ridge Leadership Computing Facility and Cetus at the Argonne Leadership Computing Facility—to train and evaluate our models. We find that we can attain ≤ 30% relative error for 92.79% and 99.64% of the samples in our test set on these platforms, respectively.

Xie, Bing↗
DOE OSTI2022

Deep learning to estimate permeability using geophysical data

Time-lapse electrical resistivity tomography (ERT) is a popular geophysical method to estimate three-dimensional (3D) permeability fields from electrical potential difference measurements. Traditional inversion and data assimilation methods are used to ingest this ERT data into hydrogeophysical models to estimate permeability. Due to ill-posedness and the curse of dimensionality, existing inversion strategies provide poor estimates and low resolution of the 3D permeability field. Recent advances in deep learning provide us with powerful algorithms to overcome this challenge. This paper presents a deep learning (DL) framework to estimate the 3D subsurface permeability from time-lapse ERT data. To test the feasibility of the proposed framework, we train DL-enabled inverse models on simulation data. Each measurement in both synthetic and field data is standardized by removing the mean and scaling the time-series to unit variance. This pre-processing step is necessary to bring simulation data closer to field observations. Subsurface process models based on hydrogeophysics are used to generate this synthetic data. Training performed on limited simulation data resulted in the DL model over-fitting. An advanced data augmentation based on mixup is implemented to generate additional training samples to overcome this issue. This mixup technique creates weakly labeled (low-fidelity) samples from strongly labeled (high-fidelity) data. The weakly labeled training data is then used to develop DL-enabled inverse models and reduce over-fitting. As both time-lapse ERT (1133048 features/realization) and 3D permeability (585453 features/realization) data samples are from a high-dimensional space, principal component analysis (PCA) is employed to reduce dimensionality. Encoded ERT and encoded permeability are generated using the trained PCA estimators. A deep neural network is then trained to map the encoded ERT to encoded permeability. This mixup training and unsupervised learning allowed us to build a fast and reasonably accurate DL-based inverse model under limited simulation data. Results show that proposed weak supervised learning can capture salient spatial features in the 3D permeability field. Quantitatively, the average mean squared error (in terms of the natural log) on the strongly labeled training, validation, and test datasets is less than 0.5. The R 2 -score (global metric) is greater than 0.75, and the percent error in each cell (local metric) is less than 10%. Finally, an added benefit in terms of computational cost is that the proposed DL-based inverse model is at least O(10 4 ) times faster than running a forward model once it is trained. Data generation, DL model training, and hyperparameter tuning to identify optimal neural network architectures utilized high-performance computing resources while the DL inference is performed on a standard laptop. Approximately, O(10 5 ) processor hours are used for generating data and DL tuning and training. We acknowledge that the data generation and DL model development are expensive. But once a DL model is trained, it can be re-used for inversion rapidly for the given system, with set physics and domain. Note that traditional inversion may require multiple forward model simulations (e.g., in the order of 10 to 1000), which are very expensive. This computational savings ≈ O(10 5 ) – O(10 7 )) makes the proposed DL-based inverse model attractive for subsurface imaging and real-time ERT monitoring applications due to fast and yet reasonably accurate estimations of permeability field.

58 GEOSCIENCES↗
DOE OSTI2019

Concepts for OpenMP Target Offload Resilience

Recent reliability issues with one of the fastest supercomputers in the world, Titan at Oak Ridge National Laboratory (ORNL), demonstrated the need for resilience in large-scale heterogeneous computing. OpenMP currently does not address error and failure behavior. This paper takes a first step toward resilience for heterogeneous systems by providing the concepts for resilient OpenMP offload to devices. Using real-world error and failure observations, the paper describes the concepts and terminology for resilient OpenMP target offload, including error and failure classes and resilience strategies. It details the experienced general-purpose computing graphics processing unit (GPGPU) errors and failures in Titan. It further proposes improvements in OpenMP, including a preliminary prototype design, to support resilient offload to devices for efficient handling of errors and failures in heterogeneous high-performance computing (HPC) systems.

Engelmann, Christian↗

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