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At least 181 records · Page 10

Status on Genetic Resistance to Rice Blast Disease in the Post-Genomic Era

Rice blast, caused by Magnaporthe oryzae, is a major threat to global rice production, necessitating the development of resistant cultivars through genetic improvement. Breakthroughs in rice genomics, including the complete genome sequencing of japonica and indica subspecies and the availability of various sequence-based molecular markers, have greatly advanced the genetic analysis of blast resistance. To date, approximately 122 blast-resistance genes have been identified, with 39 of these genes cloned and molecularly characterized. The application of these findings in marker-assisted selection (MAS) has significantly improved rice breeding, allowing for the efficient integration of multiple resistance genes into elite cultivars, enhancing both the durability and spectrum of resistance. Pangenomic studies, along with AI-driven tools like AlphaFold2, RoseTTAFold, and AlphaFold3, have further accelerated the identification and functional characterization of resistance genes, expediting the breeding process. Future rice blast disease management will depend on leveraging these advanced genomic and computational technologies. Emphasis should be placed on enhancing computational tools for the large-scale screening of resistance genes and utilizing gene editing technologies such as CRISPR-Cas9 for functional validation and targeted resistance enhancement and deployment. These approaches will be crucial for advancing rice blast resistance, ensuring food security, and promoting agricultural sustainability.

Pedrozo, Rodrigo↗

Fossil Power Plant Cyber Security Life-Cycle Risk Reduction, A Practical Framework for Implementation

Market conditions are forcing fossil electricity generation facility owners and operators to implement advanced digital technologies. These technologies enable efficiencies, operational flexibility, operations and maintenance efficiencies, and adapting to a transitioning workforce. These digital technologies, however, can increase the cybersecurity attack surface. The purpose of this research was to develop a holistic cybersecurity risk reduction framework for fossil generation facilities. The framework begins with assessing how cyber risk changes across facility life cycles, including plant, system, vendor, and business life cycles. The next phase performs consequence analysis to prioritize high consequence events. Focusing on high consequence events allows owners to use a graded, risk-informed approach to prioritize cybersecurity efforts. The final phase identifies the digital asset attack surface in sensors and instrumentation and control equipment. After the vulnerabilities are identified, the owner selects mitigating cybersecurity control measures (or countermeasures) based on the risk analysis from the previous phases. This report describes the current industry cybersecurity best practices in fossil generation that are based on the first principles for cybersecurity engineering. The report is divided into five sections that describe the implementation of the risk reduction framework and present identified research, methodological, and technology gaps that were identified through this course of research and development.

01 COAL, LIGNITE, AND PEAT↗

FY20 NREL Overview: Transforming Energy

At the National Renewable Energy Laboratory (NREL), we are transforming today’s energy challenges into tomorrow’s solutions. Our scientific research and technological innovation will shape a highly efficient and resilient energy future. Our world is transforming around us with energy solutions becoming cleaner, cheaper, renewable, and more resilient. As the population grows and new technologies and devices are added to the grid, we must examine the effects and enhance security within our most critical systems. As environmental threats expand and human demands on urban centers increase, we need more sustainable and efficient ways of generating energy that considers resource competition worldwide. We need our grid to be adaptive, autonomous, and responsive. NREL continues to anticipate these challenges, offering solutions through research, innovation, analysis, partners, and people. We are building the foundation of tomorrow’s energy landscape and inspiring the economic growth of the future.

energy security↗

Resilience assessment and planning in power distribution systems: Past and future considerations

High impact low probability (HILP) events such as hurricanes, heat waves, and floods have instigated widespread power outages and blackouts around the globe in the past decade. With the increasing challenges concerning the threats to the power distribution systems and the growing need to mitigate the impacts of the HILP events, resilience has become a crucial requirement for the power grid infrastructures. Numerous efforts have been made to define, measure, and characterize the resilience of power distribution systems. This study thoroughly reviews the state-of-the-art methods on the existing resilience evaluation framework and metrics. Here, the desirable characteristics of resilience metrics are highlighted, and the challenges associated with formulating, developing, and calculating such metrics are discussed. Next, we detail the state-of-the-art literature on planning solutions to ensure distribution system resilience. This paper aims to extract a deep insight into this challenging and critical research area and envision future opportunities that can guide the power distribution system operators/planners to formulate more effective mitigation strategies to enhance the resilience of power distribution systems.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Field‐scale analysis of miscanthus production indicates climate change may increase the opportunity for water quality improvement in a key Iowa watershed

Abstract The Raccoon River Basin is the primary source for drinking water in Iowa's largest city and plays a major role in the Mississippi River Basin's high nutrient exports. Future climate change may have major impacts on the biological, physiological, and agronomic processes imposing a threat to ecosystem services. Efforts to reduce nitrogen (N) loads within this basin have included local litigation and the implementation of the Iowa Nutrient Reduction Strategy, which suggest incorporating bioenergy crops (i.e., miscanthus) within the current corn–soybean landscape to reach a 41% reduction in nitrate loads. This study focuses on simulating N export for historical and future land use scenarios by using an agroecosystem model (Agro‐IBIS) and a hydrology model (THMB) at the 500‐m resolution, similar to the scale of agricultural fields. Model simulations are driven by CMIP5 climate data for historical, mid‐century, and late‐century under the RCP 4.5 and 8.5 warming projections. Using recent crop profit analyses for the state of Iowa, profitability maps were generated and nitrogen leaching thresholds were used to determine where miscanthus should replace corn–soybean area to maximize reductions in N pollution. Our results show that miscanthus inclusion on low profit and high N leaching areas can result in a 4% reduction of N loss under current climate conditions and may reduce N loss by 21%–26% under future climate conditions, implying that water quality has the potential continue to improve under future climate conditions when strategically implemented conservation practices are included in future farm management plans.

54 ENVIRONMENTAL SCIENCES↗

Accobeam - Acoustic Collimated Beam

Researchers at Los Alamos have developed a collimated acoustic imaging technology for non-destructive characterization of highly attenuating media, such as concrete, rocks, mud, and metal casings. The technology is used to investigate structural defects that could compromise important assets such as well boreholes, building structures and sensitive materials like explosives. Current acoustic methods are often unable to penetrate such materials deeply for more informative analysis, which limits what can be learned about asset structural integrity, crucial information companies require to make investment decisions such as fixing or replacing structures well before assets are completely compromised. ACCObeam provides requisite penetration and high-resolution acoustic imaging with applications in borehole imaging, explosives threat evaluation, and structural health evaluation. This technology will potentially save companies significant money by producing accurate and useful visual analyses to better understand the actual condition of assets in the field and respond accordingly. Los Alamos is searching for a collaboration partner to develop this technology for commercial applications that will lead to licensing opportunities for broad industry deployment.

36 MATERIALS SCIENCE↗

Mitigating Impact Through Community-Engaged Flood Modeling

Urban pluvial flooding poses a growing threat to the city of Baltimore, driven by heavy rainfall, increased impervious area, and aging infrastructure. Adapting to the risks posed by pluvial flooding is critical for building greater climate resiliency in Baltimore's Inner Harbor Watershed. This study addresses these challenges through community-informed decision analysis, which uses hydrologic modeling and optimization tools to identify robust flooding adaptation pathways. We will collaborate with community partners to identify key concerns and objectives regarding flooding. These concerns have been purposefully built in to a combined surface-subsurface dynamic flow simulation model. Model outputs are used to identify flooding locations within the Inner Harbor, and to test adaptation methods. Machine learning will be used search for solutions which meet diverse environmental, financial, and social goals, and solution performance will be examined under a wide range of potential future climatic conditions and integrated with an adaptive planning approach. This novel set of adaptation pathways will enhance the City's capacity to respond to evolving pluvial flood risk.

climate resilience↗

Integrating three plan evaluation approaches for coordinated heat resilience in cities across the Arizona urban corridor

Increasing heat poses a growing threat to cities worldwide due to both climate change and the urban heat island effect. While heat planning and governance are still emergent, research suggests that silos and conflicts within cities' networks of plans often impede heat resilience. Integrated heat resilience planning, therefore, requires a systematic and comprehensive analysis of the silos and conflicts relevant to heat resilience within networks of plans. This study is the first to combine three complementary plan evaluation methods to assess how cities' networks of plans address heat resilience. We applied 1) plan cross-referencing, 2) Plan Quality Evaluation for Heat Resilience, and 3) Plan Integration for Resilience Scorecard™ (PIRS™) for Heat to 19 plans from seven Arizona cities. We find similarities and differences in how these cities' networks of plans address heat hazards. The plans have consistently high-quality participation and coordination principles but lack details on vulnerability and climate change uncertainty, suggesting a need to move beyond immediate heat risks. We also identify opportunities to diversify policy mechanisms, spatially target high heat risk areas, and enhance the connection between planning efforts. These results validate that plan elements are interlinked and the importance of integrative plan development processes to improve heat resilience.

Extreme heat↗

Energy Transitions Initiative Partnership Project: Bainbridge Island, Washington: Cohort 2 Technical Assistance: Improving Resilience

The City of Bainbridge Island (COBI) applied for and received technical assistance from the Energy Transitions Initiative Partnership Program (ETIPP) in part to achieve their goal of 100% renewable electricity generation by 2040, five years ahead of the Washington State goal. Their second goal of increasing energy resilience is discussed in this report. Pacific Northwest National Laboratory (PNNL) completed the technical analysis aspects of the project, supported by the community partner Spark Northwest and the program administrator, the National Renewable Energy Laboratory (NREL). PNNL worked with the Community Lead and stakeholders to ensure selection of hazards and energy infrastructure of highest priority and integration of existing expertise into the analysis. We have also worked to align analysis with current activities conducted by Puget Sound Energy (PSE), and other efforts within the Bainbridge Island community around resilience. This report, conducted under the ETIPP project in partnership with COBI, aims to build on this existing knowledge base with a specific energy focus, to identify hazards and threats to critical energy infrastructure, summarize the risk, and identify and analyze remaining resilience gaps.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Stimulation of Insect Herbivory by Elevated Temperature Outweighs Protection by the Jasmonate Pathway

Rising global temperatures are associated with increases in the geographic range, population size, and feeding voracity of insect herbivores. Although it is well established that the plant hormone jasmonate (JA) promotes durable resistance to many ectothermic herbivores, little is known about how JA-mediated defense is influenced by rising temperatures. Here, we used the Arabidopsis-Trichoplusia ni (cabbage looper) interaction to investigate the relative contribution of JA and elevated temperature to host resistance. Video monitoring of T. ni larval behavior showed that elevated temperature greatly enhanced defoliation by increasing the bite rate and total time spent feeding, whereas loss of resistance in a JA-deficient mutant did not strongly affect these behaviors. The acceleration of insect feeding at elevated temperature was not attributed to decreases in wound-induced JA biosynthesis, expression of JA-responsive genes, or the accumulation of defensive glucosinolates prior to insect challenge. Quantitative proteomic analysis of insect frass, however, provided evidence for a temperature-dependent increase in the production of T. ni digestive enzymes. Our results demonstrate that temperature-driven stimulation of T. ni feeding outweighs the protective effects of JA-mediated resistance in Arabidopsis, thus highlighting a potential threat to plant resilience in a warming world.

59 BASIC BIOLOGICAL SCIENCES↗

Verification of Arms Control Treaties with Resonance Phenomena

Nuclear disarmament treaties remain insufficient to neutralize the existential threat of the nuclear weapons. Technologies are necessary for verifying the authenticity of the nuclear warheads undergoing dismantlement before counting them toward a treaty partner’s obligation. Here we present a review of concepts involving isotope-specific resonance processes, Nuclear Resonance Fluorescence (NRF) [1] and Neutron Resonance Transmission Analysis (NRTA) [2, 3], used to authenticate a warhead’s fissile components by comparing them to a previously authenticated template. All information is encrypted in the physical domain by the addition of an encrypting filter to the target, leading to measurements with an outcome similar to an equation with two unknowns. Using Monte Carlo simulations and experiments we show that the measurements readily detect hoaxing attempt, while no vital isotopic or geometric information about the weapon is released. These nuclear techniques can be used to dramatically increase the reach and trustworthiness of future nuclear disarmament treaties.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗

How lipidomics can transform our understanding of virus infections

Traditionally, lipids have been thought of as molecules that provide structure and energy, but their functional relevance in disease mechanisms is increasingly clear, and with advancements in mass spectrometry technologies, lipidomics analyses is a tool gaining recognition. Beyond the utility of lipoprotein and fatty acid profiles in clinical diagnosis and chemotaxonomic identifications, respectively, lipidomics analysis that combines knowledge across disciplines and can resolve exact lipid structures has the potential to advance clinical diagnoses and associated treatment, differentiate pathogen types (e.g., virus vs. bacterial vs. fungal), detect natural vs lab-grown viruses, and perhaps distinguish a pathogen from a benign biological agent (i.e., threat potential). As new viruses emerge and localized outbreaks expand, lipidomics will accelerate our understanding of viral infections and aid in maximizing the discovery of novel biomarkers of pathogenicity and host response.

59 BASIC BIOLOGICAL SCIENCES↗

Estimating the strength of selection for new SARS-CoV-2 variants

Abstract Controlling the SARS-CoV-2 pandemic becomes increasingly challenging as the virus adapts to human hosts through the continual emergence of more transmissible variants. Simply observing that a variant is increasing in frequency is relatively straightforward, but more sophisticated methodology is needed to determine whether a new variant is a global threat and the magnitude of its selective advantage. We present two models for quantifying the strength of selection for new and emerging variants of SARS-CoV-2 relative to the background of contemporaneous variants. These methods range from a detailed model of dynamics within one country to a broad analysis across all countries, and they include alternative explanations such as migration and drift. We find evidence for strong selection favoring the D614G spike mutation and B.1.1.7 (Alpha), weaker selection favoring B.1.351 (Beta), and no advantage of R.1 after it spreads beyond Japan. Cutting back data to earlier time horizons reveals that uncertainty is large very soon after emergence, but that estimates of selection stabilize after several weeks. Our results also show substantial heterogeneity among countries, demonstrating the need for a truly global perspective on the molecular epidemiology of SARS-CoV-2.

60 APPLIED LIFE SCIENCES↗

Development of FRET clusters for CBRN Detection

Advanced sensor capabilities for the simultaneous on-site detection of specific chemical, biological, and radiological/nuclear (CBRN) threats is important to significantly limit the risk of exposure to personnel and allow the rapid collection of essential scientific data and critical evidence. Commercially available sensor capabilities are generally complex, and/or require highly specific and ultra-sensitive methods that are often power demanding or require offsite post-analysis for positive detection, leaving personnel vulnerable. The goal of this project is to develop a portable sensor capable of simultaneously detecting CBRN signatures using a multiplexed Förster Resonance Energy Transfer (FRET) based sensor. FRET sensors are tailorable, specific, and highly dependent on the donor-acceptor distance. In this project, nanoparticles were functionalized with aptamers that were designed for the detection of methylphosphonate, a sarin metabolite. FRET was measured between quantum dot donors and dye and metal nanoparticle acceptors using optical spectroscopy.

61 RADIATION PROTECTION AND DOSIMETRY↗

3D, Real-time Label-free Visualization of Cellular Health

This work directly addresses a key question raised in TA7, Topic L1 of HDTRA1-16-24-FRCWMDCall, “Can quantum level changes be detected, mapped, and understood in the biological environment to allow faster diagnostic responses?” This work will use the inherently sensitive quantum property of a molecular excited state lifetime to visualize and map discrete, subtle nanometer-scale changes (e.g. NADPH vs NADH) that are key indicators of cellular health in response to chemical and biological threats and MCMs. It will also develop and exploit new, fast imaging light-sheet methods to allow faster diagnostic responses. This new imaging system will exploit time-correlated single photon counting and new advances in single-objective light-sheet microscopy (oblique plane microscopy) for fast, quantitative analysis of cellular redox state. We will add an entirely new dimension (excited state fluorescence lifetime) to oblique plane microscopy—a method that even without this added dimension was labeled by Nature Methods in 2021 as a ‘Method to Watch.’ Following instrument development and validation, we will explore cellular response to Burkholderia infections and antibiotic treatment in immortal cell lines followed by expansion to more realistic cellular environments (such as neuro-muscular junctions, NMJs) to test nerve agent simulants and their MCMs. As a microscopy platform, these methods hold the promise of being able to visualize a single infected cell (or a cellular compartment) and MCM treatment well before a larger and later organ/organism response.

47 OTHER INSTRUMENTATION↗

Emulation and Adversarial Analysis of EV Charging Networks

In the effort of decarbonization and evolution of the modern electrical grid, electric vehicles (EVs) play a key part to transform the grid. However, due to the rapid adoption of EVs and the demand of the charging infrastructure required to power said EVs, risk of a cyber-attack may impose serious consequences. There is a need to analyze and protect the charging ecosystem infrastructure from cyber threats before it reaches wide-scale deployment. In an effort to secure vehicle to grid (V2G) communications, standardization is necessary for continued reliable system operation. The protocol ISO 15118 outlines controls and practices that should be implemented for secure vehicle to grid (V2G) communications. The standard is gaining momentum for American markets as the demand for EV infrastructure grows. The adoption of ISO 15118 in American markets poses several challenges: the deployment of a public key infrastructure (PKI) as outlined within the standard, interoperability of charging different EVs with chargers from different manufactures using the PKI, and scaling the ecosystem to meet the demand while managing risks. This project was created to understand potential cyber and scaling challenges of PKI for EV infrastructure through utilizing a series of emulated components mapping to what exists in the EV ecosystem today, and the components of the PKI that are under development. The key nodes within the emulation that are under development are: electric vehicle (EV), electric vehicle supply equipment (EVSE), charge network operator (CNO), certificate authority (CA), and online certificate status protocol (OCSP) that must all interact using secure and trusted communications. With these emulated components and utilizing orchestration methods to rapidly deploy and scale the components, the ability to analyze risks of the ecosystem and address gaps before the PKI ecosystem is fully deployed to production should yield a more robust and mature production charging infrastructure. Our approach will use a modular architecture of virtual machines within an orchestration platform and will target scales of 100s, 1000s, and 10,000s of entities interacting. The core research questions trying to be answered with this scope of work are: what are the impacts of a rogue CA, what are the risks of certificate revocation list (CRL) management, what is the value of OCSP stapling, what components are vulnerable to DOS attacks, and what test effective payloads may impact the components.

charging ecosystem↗

The Nuclear Digital I&C System Supply Chain Cyber-Attack Surface

The nuclear supply chain attack surface is a large, complex network of interconnected stakeholders and activities. The global economy has widened and deepened the supply chain, resulting in larger numbers of geographically dispersed locations and increased difficulty ensuring the authenticity and security of digital assets. Although the nuclear industry has made significant strides in securing facilities from cyber-attacks, the supply chain remains vulnerable. This paper outlines supply chain threats and vulnerabilities and provides a Digital I&C System Supply Chain Cyber-Attack Surface diagram to illustrate the complexity of securing hardware, firmware, software, and system information throughout the entire supply chain lifecycle. The knowledge presented in this paper provides a foundation to use in cybersecurity supply chain risk analysis and to guide future supply chain research and development efforts leading to enhancement of a nuclear facility’s overall security posture.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗