Fast Determination of the Lignin Monomer Compositions of Genetic Variants of Poplar via Fast Pyrolysis/Atmospheric Pressure Chemical Ionization Mass Spectrometry
Not provided.
Biochemistry & Molecular Biology↗
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Results for “monomer”
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Dehydra-decyclization of tetrahydrofurans to diene monomers over metal oxides
The dehydra-decyclization of tetrahydrofuran (THF) to butadiene was investigated over a series of metal oxide catalysts, where a common set of chemical pathways was identified. Alongside butadiene, propene is formed via a retro-Prins condensation as the main side product typically observed. Reaction occurred at similar temperatures on each of the oxides, but tetragonal zirconia (t-ZrO 2 ) and monoclinic zirconia (m-ZrO 2 ) were unique in showing high selectivity to butadiene (>90%). Near quantitative yields to butadiene could be achieved over t-ZrO 2 at 673 K and a WHSV of 0.93 g THF gcat –1 h –1 . Through contact time studies, butadiene is determined to be a primary product. Methyl-substituted THF gave only moderate increases in rates and the products showed minimal isomerization of the carbon backbone. The t-ZrO 2 catalyst was found to be relatively stable with time on stream, experiencing coking as a likely source of deactivation. Complete regeneration of the catalyst was demonstrated through calcination alone, allowing for multiple regenerations with no irreversible loss in activity or selectivity. Lastly, the catalytic activity of zirconia was found to be structure insensitive, with t-ZrO 2 and m-ZrO 2 exhibiting similar initial activities; however, m-ZrO 2 was observed to deactivate much more rapidly.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Catalyst choice impacts aromatic monomer yields and selectivity in hydrogen-free reductive catalytic fractionation
Pd/C and Pt/C show high activity for hydrogen-free reductive catalytic fractionation compared to Ru/C and Ni/C.
09 BIOMASS FUELS↗
Production of neo acids from biomass-derived monomers
Neo acids are highly branched carboxylic acids currently produced from fossil fuels. In this work, we produce renewable neo acids from lignocellulosic biomass-derived furan and keto acids via C–C coupling through hydroxyalkylation/alkylation (HAA), followed by ring-opening of furans through hydrodeoxygenation (HDO). Here, we show effective C–C coupling over acid catalysts. Catalyst screening and multi-parameter optimization using machine learning optimize the yield and elucidate the correlation between variables and outcomes. We demonstrate selective furan ring-opening without affecting the carboxylic acid to make neo acids using a co-catalyst involving Pd supported on carbon and metal triflate.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
High performance long chain polyesters via melt copolymerization of cutin-inspired monomers
Biopolymers have exhibited potential as sustainable and circular replacements to existing commodity thermoplastic polymers. However, current biopolymers are limited by poor thermomechanical performance compared with their petroleum-derived counterparts. Herein, we report a simple strategy to achieve good mechanical properties in bio-inspired long-chain polyesters via melt copolymerization. By combining mono- and poly-hydroxyl functionalized long chain fatty acids, we show that tough, semi-crystalline materials can be produced that outperform related biopolymers in terms of their thermomechanical behavior. Finally, we envision that long-chain polyesters derived from hydroxylated fatty acids represent an ideal platform to create the next generation of commodity thermoplastics that possess advantaged properties, inherent biodegradability, and feedstock stability.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Biobased chemical recycling: aminolysis of PET using renewable reagents and monomers to synthesize new semi-aromatic polyamides
Chemical recycling of PET is a method of depolymerizing polymer chains to monomeric components enabling the synthesis of second-generation materials with virgin-like quality. Commercial chemical recycling techniques rely upon high pressure methanolysis to create precursors capable of synthesizing a second-generation PET resin. However, despite the circular approach of methanolysis, a product with a very short lifespan and similar value is created. The approach of the current study is to utilize aminolysis as an ambient pressure technique to create precursors for higher value materials with longer lifespans to address the current crisis in plastic waste. Semi-aromatic polyamides (SAP) are desired in this circumstance because of their high melting point and heat resistance combined with good melt-processability similar to aliphatic polyamides. In this study SAPs were synthesized using precursors recovered from the aminolysis of PET employing biobased diamines and dicarboxylic acids. While aminolysis has been explored in previous studies, this work investigated the use of biobased components from castor oil: decamethylene diamine during recycling and sebacic acid during polymerization. Polymer synthesis resulted in the formation of SAPs similar to polyphthalamides (PPA) with novel structures given the aromatic portion from terephthalic acid (TPA) and aliphatic portion from the diamines and diacids. The synthesized materials exhibited excellent thermal stability with high glass transition temperatures. Novel polymers were created with varying aliphatic chain length to understand fundamental parameters needed to produce a valuable polymer from post-consumer waste.
High performance Applications↗
Factors underlying a latitudinal gradient in the S/G lignin monomer ratio in natural poplar variants
The chemical composition of wood plays a pivotal role in the adaptability and structural integrity of trees. However, few studies have investigated the environmental factors that determine lignin composition and its biological significance in plants. Here, we examined the lignin syringyl-to-guaiacyl (S/G) ratio in members of a Populus trichocarpa population sourced from their native habitat and conducted a genome wide association study to identify genes linked to lignin formation. Our results revealed many significant associations, suggesting that lignin biosynthesis is a complex polygenic trait. Additionally, we found an increase in the S/G ratio from northern to southern geographic origin of the trees sampled, along with a corresponding metabolic and transcriptional reprogramming of xylem cell wall biosynthesis. Further molecular analysis identified a mutation in a cell wall laccase genetically associated with higher S/G ratios that predominate in trees from warmer lower latitudes. Collectively, our findings suggest that lignin heterogeneity arises from an evolutionary process enabling poplar adaptation to different climatic challenges.
adaptation↗
RB-TnSeq elucidates dicarboxylic-acid-specific catabolism in β-proteobacteria for improved plastic monomer upcycling
Dicarboxylic acids are key components of many polymers and plastics, making them a target for both engineered microbial degradation and sustainable bioproduction. In this study, we generated a comprehensive data set of functional evidence for the genetic basis of dicarboxylic and fatty acid metabolism using randomly barcoded transposon sequencing (RB-TnSeq). We identified four β-proteobacteria that displayed robust growth with dicarboxylic acid sole carbon source and cultured their mutant libraries with dicarboxylic and fatty acids with carbon chain lengths from C3 to C12. The resulting fitness data suggested that dicarboxylic and fatty acid metabolisms are largely distinct, and different sets of β-oxidation genes are required for catabolizing dicarboxylic versus fatty acids of the same carbon chain lengths. In addition, we identified transcriptional regulators and transporters with strong fitness phenotypes related to dicarboxylic acid utilization. In Ralstonia sp. UNC404CL21Col (R. CL21), we deleted two transcriptional repressors to improve its utilization of short-chain dicarboxylic acids. We exploited the diacid-utilizing catabolism of R. CL21 to upcycle a mock mixture of the dicarboxylic acids produced when polyethylene is oxidized. After introducing a heterologous indigoidine production pathway, this engineered Ralstonia produced 0.56 ± 0.02 g/L indigoidine from a mixture of dicarboxylic acids as a carbon source, demonstrating the potential of R. CL21 to upcycle plastic wastes to products derived from tricarboxylic acid (TCA) cycle intermediates. IMPORTANCE: Upcycling the carbon in plastic wastes to value-added products is a promising approach to address the plastic waste and climate crises, and dicarboxylic acid metabolism is an important facet of several approaches. Improving our understanding of the genetic basis of this metabolism has the potential to uncover new enzymes and genetic parts for engineered pathways involving dicarboxylic acids. Our data set is the most comprehensive interrogation of dicarboxylic acid catabolism to date, and this work will be of utility to researchers interested in both plastics bioproduction and upcycling applications.
Pearson, Allison N↗
Transcriptomic data sets for Novosphingobium aromaticivorans grown with the β-5-linked aromatic dimer dehydrodiconiferyl alcohol and the related G-aromatic monomers vanillin and ferulic acid
ABSTRACT The transcriptomes of a 2-pyrone-4,6-dicarboxylic acid-producing strain of Novosphingobium aromaticivorans DSM12444 were determined when grown in minimal medium containing glucose alone or glucose plus vanillin, ferulic acid, or the β-5-linked aromatic dimer dehydrodiconiferyl alcohol as carbon sources. Here, we present the RNA-sequencing data we obtained.
Metz, Fletcher↗
X-ray crystallographic and hydrogen deuterium exchange studies confirm alternate kinetic models for homolog insulin monomers
Despite the crucial role of various insulin analogs in achieving satisfactory glycemic control, a comprehensive understanding of their in-solution dynamic mechanisms still holds the potential to further optimize rapid insulin analogs, thus significantly improving the well-being of individuals with Type 1 Diabetes. Here, we employed hydrogen-deuterium exchange mass spectrometry to decipher the molecular dynamics of newly modified and functional insulin analog. A comparative analysis of H/D dynamics demonstrated that the modified insulin exchanges deuterium atoms faster and more extensively than the intact insulin aspart. Additionally, we present new insights derived from our 2.5 Å resolution X-ray crystal structure of modified hexamer insulin analog at ambient temperature. Furthermore, we obtained a distinctive side-chain conformation of the Asn3 residue on the B chain (AsnB3) by operating a comparative analysis with a previously available cryogenic rapid-acting insulin structure (PDB_ID: 4GBN). The experimental conclusions have demonstrated compatibility with modified insulin’s distinct cellular activity, comparably to aspart. Additionally, the hybrid structural approach combined with computational analysis employed in this study provides novel insight into the structural dynamics of newly modified and functional insulin vs insulin aspart monomeric entities. It allows further molecular understanding of intermolecular interrelations driving dissociation kinetics and, therefore, a fast action mechanism.
59 BASIC BIOLOGICAL SCIENCES↗
DFO Computational Modeling Project - Catalytic Upgrading of Bio-based Furfural to 1,5-Pentanediol: A New Renewable Monomer for the Coatings Industry (Final Report)
This report summarizes the results of a collaborative effort between Oak Ridge National Laboratory (ORNL) and Pyran™ Inc. to utilize modeling capabilities developed by the CCPC (Consortium for Computational Physics and Chemistry) to assist Pyran in scaling up its proprietary process for thermocatalytic conversion of furfural to 1,5 pentanediol (PDO). Pyran’s bio-based PDO is a direct replacement for petroleum-based PDO and 1,6 hexanediol (HDO) currently used in polymers, additives, coatings, adhesives and sealants. The current market is in excess of $\$$1B/yr. According to Pyran, their production process results in 95+% reduction in fossil CO 2 at lower production costs compared to the existing petroleum-based routes for PDO & HDO. Other chemicals based on intermediates from this process have current markets in excess of $\$$10B/yr.
36 MATERIALS SCIENCE↗
Small-Molecule Catalysis by Transition-Metal Isocyanide Monomers, Clusters and Materials
DOE Catalysis Science Award DE-SC0018243 focused on the development and mechanistic understanding of small-molecule-activation and catalysis by monomeric and multinuclear transition-metal complexes supported by encumbering m-terphenyl isocyanide ligands. An additional goal of this award was the development of solid-state network materials featuring low-valent metal centers and ditopic m-terphenyl isocyanide ligands into functional platforms for catalytic chemical transformations. The emphasis on m-terphenyl isocyanides stems from a sustained effort by our research team that has shown these ancillary ligands to be particularly adept at stabilizing electronically or coordinately unsaturated metal centers. These metal centers in turn have been shown to effect catalytic and/or stoichiometric chemical transformations of substrates relevant to high-priority energy science goals. In addition, the stabilizing environment provided by these encumbering ligands has in several instances aided the detailed mechanistic elucidation of substrate activation process and/or have enabled important electronic structure insights to be uncovered.
36 MATERIALS SCIENCE↗
Catalytic Upgrading of Bio-based Furfural to 1,5-Pentanediol: A New Renewable Monomer for the Coatings Industry
This report summarizes the results of a collaborative effort between Oak Ridge National Laboratory (ORNL) and Pyran™ Inc. to utilize modeling capabilities developed by the CCPC (Consortium for Computational Physics and Chemistry) to assist Pyran in scaling up its proprietary process for thermocatalytic conversion of furfural to 1,5 pentanediol (PDO). Pyran’s bio-based PDO is a direct replacement for petroleum-based PDO and 1,6 hexanediol (HDO) currently used in polymers, additives, coatings, adhesives and sealants. The current market is in excess of $1B/yr. According to Pyran, their production process results in 95+% reduction in fossil CO 2 at lower production costs compared to the existing petroleum-based routes for PDO & HDO. Other chemicals based on intermediates from this process have current markets in excess of $10B/yr.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Polyurethanes Rendered Depolymerizable by Introduction of a Metathesis Cleavable Co-Monomer.
Abstract not provided.
Jones, Brad↗
One-pot hydrodeoxygenation (HDO) of lignin monomers to C9 hydrocarbons co-catalyzed by Ru/C and Nb 2 O 5 (Final Technical Report)
Non-edible lignocellulosic biomass represents the most abundant source of renewable carbon on Earth. To harness its potential for producing valuable fuels and building blocks for renewable plastics, it is essential to undergo a process that involves the removal of oxygen atoms from its components. This report outlines various methodologies aimed at converting biomass components into fuels and building blocks suitable for renewable plastics. The primary emphasis of the described research lies in leveraging sustainable chemistry and catalysis to valorize biomass into fuels and chemicals.
09 BIOMASS FUELS↗
MassIVE MSV000085948 - Utilization of syringyl lignin-derived compounds and production of 2-pyrone-4,6-dicarboxylic acid by Pseudomonas putida KT2440: Lignin is an abundant aromatic polymer formed in plants by coupling reactions of p-coumaryl, coniferyl, and sinapyl alcohols. Pseudomonas putida KT2440 (P. putida KT2440), a robust soil bacterium, naturally catabolizes many aromatic compounds derived from lignin as carbon and energy sources and has been extensively engineered to valorize guaiacyl (G) and p-hydroxyphenyl (H) lignin-derived aromatic species to valuable chemicals. However, only a few studies report the capacity of Pseudomonads to grow on syringyl (S) lignin-derived compounds. In this work, we demonstrate that P. putida KT2440 catabolizes syringate in the presence of an auxiliary energy source. Overexpression of vanAB, encoding a native Rieske non-heme iron monooxygenase, enabled catabolism of syringate and syringaldehyde without an additional carbon and energy source. In vitro biochemical characterization of VanAB confirmed that this enzyme O-demethylates syringate to 3-O-methylgallate and, subsequently, 3-O-methylgallate to gallate, albeit 4- and 55-fold less efficiently than vanillate, respectively. Transcriptomics and proteomics experiments demonstrate that the galADBC transcripts and enzymes required for gallate catabolism are induced when vanAB is overexpressed during cultivation in syringate. Further, we show that that the endogenous protocatechuate-3,4-dioxygenase PcaHG ring-opens gallate to produce 2-pyrone-4,6-dicarboxylic acid (PDC), a promising bio-based chemical. Constitutive overexpression of vanAB and pcaHG along with galA deletion enabled PDC production from SA at a 70% (mol/mol) yield. Furthermore, leveraging the LigAB dioxygenase from Sphingobium sp. SYK-6 and VanAB O-demethylase from Pseudomonas sp. HR199 enabled simultaneous conversion of monomers with S-, G-, and H-type functionality to PDC at 82% (mol/mol) yield. Overall, this study elucidates a native pathway for catabolism of syringyl lignin-derived compounds in P. putida KT2440 and demonstrates the potential of this robust host for biological funneling of substrates derived from all three canonical monolignols.
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Beckham, Gregg↗
Deep Eutectic Solvent Pretreatment of Transgenic Biomass With Increased C6C1 Lignin Monomers
Not Available
59 BASIC BIOLOGICAL SCIENCES↗