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DOE OSTI2025

First Measurement of Near-Threshold and Subthreshold 𝐽/𝜓 Photoproduction off Nuclei

We report on the first measurement of J/ψ photoproduction from nuclei in the photon energy range of 7 to 10.8 GeV, extending above and below the photoproduction threshold in the free proton of ∼ 8.2 GeV. The experiment used a tagged photon beam incident on deuterium, helium, and carbon, and the GlueX detector at Jefferson Lab to measure the semi-inclusive A(γ, e + e − p) reaction with a dilepton invariant mass M(e + e − ) ∼ m J/ψ = 3.1 GeV. The incoherent J/ψ photoproduction cross sections in the measured nuclei are extracted as a function of the incident photon energy, momentum transfer, and proton reconstructed missing light-cone momentum fraction. Comparisons with theoretical predictions assuming a dipole form factor allow extracting a gluonic radius for bound protons of p $\sqrt4⟨r^2⟩$ = 0.85 ± 0.14 fm. The data also suggest an excess of the measured cross section for sub-threshold production and for interactions with high missing light-cone momentum fraction protons. The measured enhancement can be explained by modified gluon structure for high-virtuality bound-protons.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

NASA NTRS1980

Studies of laser and laser devices

The generation of tunable, infrared, and ultraviolet light, and the control of this light by mode-locking and modulation techniques are discussed. Particular emphasis is given to energy storage and extraction using atomic levels, the development of a tunable narrowband vacuum ultraviolet light source, and to the generation and applications of ultrashort optical pulses.

Harris, S. E.↗

DOE OSTI2022

Pyruvate, phosphate dikinase regulatory protein impacts light response of C4 photosynthesis in Setaria viridis

In C4 plants, the pyruvate (Pyr), phosphate dikinase regulatory protein (PDRP) regulates the activity of the C4 pathway enzyme Pyr, phosphate dikinase (PPDK) in a light-/dark-dependent manner. The importance of this regulatory action to C4 pathway function and overall C4 photosynthesis is unknown. To resolve this question, we assessed in vivo PPDK phospho-regulation and whole leaf photophysiology in a CRISPR–Cas9 PDRP knockout (KO) mutant of the NADP-ME C4 grass green millet (Setaria viridis). PDRP enzyme activity was undetectable in leaf extracts from PDRP KO lines. Likewise, PPDK phosphorylated at the PDRP-regulatory Thr residue was immunologically undetectable in leaf extracts. PPDK enzyme activity in rapid leaf extracts was constitutively high in the PDRP KO lines, irrespective of light or dark pretreatment of leaves. Gas exchange analysis of net CO2 assimilation revealed PDRP KO leaves had markedly slower light induction kinetics when leaves transition from dark to high-light or low-light to high-light. In the initial 30 min of the light induction phase, KO leaves had an ~15% lower net CO2 assimilation rate versus the wild-type (WT). Despite the impaired slower induction kinetics, we found growth and vigor of the KO lines to be visibly indistinguishable from the WT when grown in normal air and under standard growth chamber conditions. However, the PDRP KO plants grown under a fluctuating light regime exhibited a gradual multi-day decline in Fv/Fm, indicative of progressive photosystem II damage due to the absence of PDRP. Collectively, our results demonstrate that one of PDRP’s functions in C4 photosynthesis is to ensure optimal photosynthetic light induction kinetics during dynamic changes in incident light.

Plant Sciences↗

DOE OSTI2020

Conceptual Basis and Techno-Economic Modeling for Integrated Algal Biorefinery Conversion of Microalgae to Fuels and Products (2019 NREL TEA Update: Highlighting Paths to Future Cost Goals via a New Pathway for Combined Algal Processing)

The report documents the conceptual basis for a new potential Combined Algal Processing design strategy which may allow more flexibility in accommodating different algal biomass feedstock compositions, by enabling upgrading of both protein and carbohydrates in a single step, without a strict requirement for either component to be in soluble or monomeric form, while maintaining effective wet lipid extraction techniques to enable high lipid recoveries. In light of previously-established constraints around algal biomass costs (which are significantly higher than lignocellulosic terrestrial biomass), the present CAP processing strategy reflects an integrated biorefinery concept producing both fuels and value-added chemical coproducts as a means to improve profitability and generate coproduct revenues to help drive down the minimum fuel selling price (MFSP) towards economically viable levels. Namely, this report highlights an integrated CAP biorefinery process and associated technical targets that would be required to achieve U.S. Department of Energy target MFSP goals of $2.5/gallon gasoline equivalent by 2030. This is accomplished by a process involving low-cost seasonal storage of algal biomass during high-growth seasons, rapid flash hydrolysis pretreatment of the biomass, solvent extraction of pretreated biomass, cleanup and fractionation of lipids into triglyceride and free fatty acid fractions, and a series of thermochemical conversion steps to upgrade carbohydrates and protein to hydrocarbon fuels. These steps include mild oxidative treatment (MOT), a process originally investigated at NREL for upgrading lignin, followed by catalytic ketonization and hydrotreating of MOT products to fuels. Isolated triglycerides are sent to a coproduct train, with the base case focused on upgrading to polyurethane foams as a high-value, high-market-volume coproduct.

09 BIOMASS FUELS↗

NASA NTRS2010

Timing Analysis with INTEGRAL: Comparing Different Reconstruction Algorithms

INTEGRAL is one of the few instruments capable of detecting X-rays above 20keV. It is therefore in principle well suited for studying X-ray variability in this regime. Because INTEGRAL uses coded mask instruments for imaging, the reconstruction of light curves of X-ray sources is highly non-trivial. We present results from the comparison of two commonly employed algorithms, which primarily measure flux from mask deconvolution (ii-lc-extract) and from calculating the pixel illuminated fraction (ii-light). Both methods agree well for timescales above about 10 s, the highest time resolution for which image reconstruction is possible. For higher time resolution, ii-light produces meaningful results, although the overall variance of the lightcurves is not preserved.

Grinberg, V.↗

DOE OSTI2025

Towards combination of charge and light readout at O(10) MeV energies in DUNE

The Deep Underground Neutrino Experiment (DUNE) is an experiment under construction that will employ 10-kt scale liquid-argon-TPC technology to do precision measurements of neutrino oscillations. Apart from the determination of CP violation in neutrino interactions, one of the main scientific goals of DUNE is the detection of neutrinos from a supernova burst. It is imperative to maximise the potential of the detector for extracting information for these rare events. The use of light signals to aid the calorimetry of neutrino interactions provides such potential. We will present current efforts to demonstrate the application of combined calorimetry in one of the DUNE prototype detectors at CERN. The ground-level placement of the detector allows collection of large samples of cosmic-ray muons stopping within its volume. Michel electrons from muon decay can be identified in both the ionization charge and scintillation light, serving as a proxy for supernova neutrino interactions at O(10) MeV energies. The method for demonstrating combined calorimetry and its associated challenges will be introduced. We will also summarise the current analysis status and future prospects.

Pěč, Viktor [Prague, Inst. Phys.] (ORCID:000000034↗

DOE OSTI2024

Impact of the MARATHON data on F 2⁢n⁡ /F 2⁢p and off-shell effects in light nuclei

The neutron structure function, F 2⁢n⁡ , has historically been extracted from measurements of the deuteron structure function, which is limited by our understanding of the nuclear effects on the bound proton and neutron. The MARATHON Collaboration recently extracted F 2⁢n⁡ from the comparison of 3 H and 3 He targets, where the nuclear effects are larger but nearly identical, yielding a precise extraction of F 2⁢n⁡ /F 2⁢p . Here, to ensure that this comparison is not biased by the specific model of nuclear effects used by MARATHON, we examine a range of models of the nuclear effects to obtain a more conservative, but more model-independent, extraction of F 2⁢n⁡ /F 2⁢p for comparison with deuteron extractions. Even with this approach, the results are precise enough to compare to deuteron extractions, providing new constraints on the nuclear effects in the deuteron and indicating the need for larger nuclear corrections than those included in most models.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2023

Automated Construction of a Photocatalysis Dataset for Water-Splitting Applications

We present an automatically generated dataset of 15,755 records that were extracted from 47,357 papers. These records contain water-splitting activity in the presence of certain photocatalysts, along with additional information about the chemical reaction conditions under which this activity was recorded. These conditions include any co-catalysts and additives that were present during water splitting, the length of time for which the photocatalytic experiment was conducted, and the type of light source used, including its wavelength. Despite the text extraction of such a wide range of chemical reaction attributes, the dataset afforded good precision (71.2%) and recall (36.3%). These figures-of-merit were calculated based on a random sample of open-access papers from the corpus. Mining such a complex set of attributes required the development of novel techniques in knowledge extraction and interdependency resolution, leveraging inter- and intra-sentence relations, which are also described in this paper. We present a new version (version 2.2) of the chemistry-aware text-mining toolkit ChemDataExtractor, in which these new techniques are included.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2021

Thermochemistry of sodium rare earth ternary fluorides, NaREF 4

Sodium rare earth fluorides, NaREF 4 (RE = rare earth), are used as luminescent materials for light emission and biomedical applications and are important compositions for extracting and separating RE elements. Solution calorimetric measurements of a series of β-structured NaREF 4 (Na 1.5 RE 1.5 F 6 ) phases with various RE elements determined their heats of formation. Though the lattice contracts from light to heavy RE elements, NaREF 4 compounds show more exothermic enthalpies of formation from binary components with the decrease of RE 3+ radii, contrary to behavior seen in most RE oxide ternary compounds. Furthermore, by constructing Born–Haber cycles, the different slopes of lines relating lattice energies to lattice parameters in binary and ternary fluorides appear to be the reason for this reverse trend, which can be associated with changes in the coordination number of RE cations. These trends and the metastability of sodium light RE fluorides not only reveal the key role of ionic radius in RE compound stability, but also are significant for the design and synthesis of new materials and motivate the more effective utilization of RE.

36 MATERIALS SCIENCE↗

DOE OSTI2022

Characterization and description of a spectrum unfolding method for the $\mathrm{CATRiNA}$ neutron detector array

We report the CATRiNA deuterated neutron detector array at Florida State University consists of 16 2" x 2" and 16 $" x 2" EJ-315 detectors with characteristic light output and pulse-shape discrimination capabilities. The unique properties of the detectors, in part due to the anisotropic nature of (d,n) scattering, are used to extract the energy of neutrons via pulse-height spectrum unfolding. The unfolding method uses the light output and response matrix of the detectors to extract neutron energies, independent of the traditional time-of-flight (ToF) technique. Detailed response matrices of the CATRiNA detectors were measured at the Edwards Accelerator Laboratory at Ohio University via the 9 Be(d,n) and 27 Al(d,n) reactions. Full characterization of the detectors using digital electronics, as well as a description of the unfolding method are reported.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2022

Soil organic matter, tree communities, and fungal communities across mycorrhizal gradients in the Eastern United States

We collected these data to investigate how mycorrhizal associations are related to soil C and N across four sites in the eastern U.S. broadleaf forest biome, which capture broad variability in climate and tree species. Our sites represented each of the four ecoregions in the eastern United States temperate forest—warm continental (New Hampshire), hot continental (Wisconsin), Prairie (Illinios), and subtropical (Georgia). This breadth naturally provided tree species diversity and allowed us to also investigate how soil C and N are related to canopy tree and EcM fungal community composition. Specifically, we analyzed the effects of mycorrhizal association, canopy tree family, and EcM fungal taxa on the proportion of C and N associated with soil minerals (MAOM) and bulk soil C:N. These are plot level data from forests in New Hampshire, Georgia, Wisconsin, and Illinois. The plots are 10 m in radius and vary across gradients of ectomycorrhizal tree basal area. Within each plot, data include the basal area of all trees >2 cm in diameter identified to species, the abundance of different fungal taxa based on ITS sequences, and the %C, %N, C:N of bulk soil and of soil density fractions (free light, occluded light, and particulate) as well as the proportion of soil C and N within each fraction. The soil data (both organic matter and fungal communities) are from the top 10 cm of the mineral soil. This also includes a meta-analysis of leaf litter k and C:N values for the tree species present in the forests.The "Tree_BA_ALL.csv" files include the basal area of all trees >2 cm in diameter at breast height within our 10 cm radii plots. The "Soil_Data_Final.csv" file contains the soil carbon and nitrogen in bulk and density fractions (concentrations as well as proportion for free light fraction (fLF), occluded light fraction (oLF), and heavy or dense fraction (HF), oxalate extractable iron and aluminum concentrations, as well as the geographic coordinates of each plot's location. The "FungiNonRelative.csv" file contains the abundances of fungal taxa identified via ITS sequencing for each plot (with the exception of 4 plots from GA where there was not enough quality DNA to extract).The "R_ReadyK.csv" and "R_Ready_CN.csv" files contain leaf litter decomposition constant (k) and C:N values from the literature for the tree species found at our sites.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

Biosynthesis of Minimal C-Phycocyanin Chromophore Assemblies in E. coli Provides a Platform to Dissect Protein-Mediated Tuning of Exciton Transfer

Cyanobacteria are arguably among the most evolutionarily successful organisms on Earth, inhabiting a wide range of ocean, freshwater, soil, and even desert environments on every continent. The cyanobacterial phycobilisome consists of stacks of disk-like light-collecting moieties, allophycocyanin (APC) and phycocyanin (CPC), with covalently bound phycocyanobilin (PCB) pigments. The ways in which the energies of the specific chromophores in these complexes are tuned by the protein to achieve its highly efficient and directional energy transfer are not fully understood, as complex combinations of decay pathways are occurring simultaneously and competitively through this elaborate light-harvesting system. This makes it difficult to extract information about isolated protein-pigment interactions. We provide herein a description of a useful new experimental platform in which we have recombinantly expressed a fully functioning CPC complex and selectively created minimal chromophore sets to study their individual contributions to the overall CPC spectra. Structural and computational analysis of this protein system have provided a greater understanding of how the protein environment serves to alter the photophysics of each of these chromophores. Introduction of a quencher into various positions within CPC confirmed the ability of the protein environment to tune the directionality of energy transport in this assembly. Further mutational analysis suggested the roles of key amino acids surrounding the chromophores, showcasing the utility of heterologous expression techniques for understanding the effects of structure on EET mechanisms in the phycobilisome.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2023

Calibration of the light-flavour jet mistagging efficiency of the b -tagging algorithms with Z+jets events using 139 $\textrm{fb}^{-1}$ of ATLAS proton–proton collision data at $\sqrt{s} = 13$ TeV

The identification of b -jets, referred to as b -tagging, is an important part of many physics analyses in the ATLAS experiment at the Large Hadron Collider and an accurate calibration of its performance is essential for high-quality physics results. This publication describes the calibration of the light-flavour jet mistagging efficiency in a data sample of proton–proton collision events at $\sqrt{s} = 13$ TeV corresponding to an integrated luminosity of 139 fb -1 . The calibration is performed in a sample of Z bosons produced in association with jets. Due to the low mistagging efficiency for light-flavour jets, a method which uses modified versions of the b-tagging algorithms referred to as flip taggers is used in this work. A fit to the jet-flavour-sensitive secondary-vertex mass is performed to extract a scale factor from data, to correct the light-flavour jet mistagging efficiency in Monte Carlo simulations, while simultaneously correcting the b -jet efficiency. With this procedure, uncertainties coming from the modeling of jets from heavy-flavour hadrons are considerably lower than in previous calibrations of the mistagging scale factors, where they were dominant. The scale factors obtained in this calibration are consistent with unity within uncertainties.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

A Study of the Gain of Microchannel Plates in the Ionization Profile Monitors at Fermilab

One of the on-going issues with the use of microchannel plates (MCP) in the ionization profile monitors (IPM) at Fermilab is the significant decrease in gain over time. There are several possible issues that can cause this. Historically, the assumption has been that this is aging, where the secondary emission yield (SEY) of the pore surface changes after some amount of extracted charge. Recent literature searches have brought to light the possibility that this is an initial ‘scrubbing’ effect whereby adsorbed gasses are removed from the MCP pores by the removal of charge from the MCP. This paper discusses the results of studies conducted on the IPMs in the Main Injector at Fermilab.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

NASA NTRS1977

Measurement of the nitric oxide altitude distribution in the mid-latitude mesosphere

A simple rocket-borne system has been developed for deriving nitric oxide concentration in the mesosphere from measurements of resonantly scattered solar ultraviolet radiation in the NO gamma band near 2150 A. The NO signal is extracted from a background of Rayleigh-scattered light by a direct measurement of this scattered light by use of an NO absorption cell. This system was utilized to measure the NO concentration above White Sands, New Mexico, in the altitude range from 69 to 101 km. The derived NO profile shows a concentration of about 30 million per cu cm at 67 and 100 km with a deep valley (more than an order of magnitude less) at about 84 km. Comparison with model calculations indicates that the time constant for NO chemistry is smaller than or comparable with that for transport.

Baker, K. D.↗

NASA NTRS1983

Electron Transport in Paracoccus Halodenitrificans and the Role of Ubiquinone

The membrane-bound NADH oxidase of Paracoccus halodenitrificans was inhibited by dicoumarol, 2-n-heptyl-4-hydroxyquinoline-N-oxide (HQNO), and exposure to ultraviolet light (at 366 nm). When the membranes were extracted with n-pentane, NADH oxidase activity was lost. Partial restoration was achieved by adding the ubiquinone fraction extracted from the membranes. Succinate oxidation was not inhibited by dicoumarol or HQNO but was affected by ultraviolet irradiation or n-pentane extraction. However, the addition of the ubiquinone fraction to the n-pentane-extracted membranes did not restore enzyme activity. These observations suggested the reducing equivalents from succinate entered the respiratory chain on the oxygen side of the HQNO-sensitive site and probably did not proceed through a quinone.

Hochstein, L. I.↗

NASA NTRS1984

Electron transport in Paracoccus halodenitrificans and the role of Ubiquinone

Hochstein, L. I.↗

NASA NTRS1993

Alkali metal carbon dioxide electrochemical system for energy storage and/or conversion of carbon dioxide to oxygen

An alkali metal, such as lithium, is the anodic reactant; carbon dioxide or a mixture of carbon dioxide and carbon monoxide is the cathodic reactant; and carbonate of the alkali metal is the electrolyte in an electrochemical cell for the storage and delivery of electrical energy. Additionally, alkali metal-carbon dioxide battery systems include a plurality of such electrochemical cells. Gold is a preferred catalyst for reducing the carbon dioxide at the cathode. The fuel cell of the invention produces electrochemical energy through the use of an anodic reactant which is extremely energetic and light, and a cathodic reactant which can be extracted from its environment and therefore exacts no transportation penalty. The invention is, therefore, especially useful in extraterrestrial environments.

Hagedorn, Norman H.↗