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DOE OSTI2026

Untargeted, tandem mass spectrometry (LC/MS-MS) metaproteomes from soil samples in control and warming plots in Blodgett Forest, CA (2014-2021)

The pathways of carbon transport and loss through and from soils—soil organic matter (SOM) depolymerization to dissolved organic carbon and mineralization to carbon dioxide (CO2)—are fundamentally driven by microbial activity, which is strongly regulated by environmental conditions. As part of Lawrence Berkeley National Laboratory (LBNL) Terrestrial Ecosystem Science (TES) Belowground Biogeochemistry Science Focus Area (SFA), we have established a novel whole-soil long-term warming experiment at the University of California (UC) Blodgett Forest Research Station (Sierra Nevada) in 2014, where we study the role of biogeochemical, microbial and geochemical process interactions in SOM decomposition and stabilization. This package contains soil metaproteomics data in the context of site specific metagenomes from soil depth profiles in three paired control and warming plots from a temperate mixed forest in Northern California. Each paired plot had been subjected to experimental warming since June 2014 to simulate a predicted climate change scenario for northern California. These metaproteomes were collected in 2018 after 4.5 years of warming from five depth intervals (0-10 cm, 10-30 cm, 30-45 cm, 45-60 cm, 60-80 cm). For protein identification, the collected spectra were searched following a target-decoy search strategy against a database of metagenome predicted proteins (covering 96 samples from 2014 to 2021) representing the complete sequence diversity at the site. Data was searched with mass spectrometry database search tool (MS-GF+) using Pacific Northwest National Laboratory (PNNL)'s Data Management System (DMS) Processing pipeline. The metagenomes are published as part of another data package. Raw metaproteomic data and the data products from MS-GF+ are deposited in the Mass Spectrometry Interactive Virtual Environment (MassIVE) database under accession no. MSV000097826. Here we present a dataset that includes spectral counts for the detected proteins across samples (EMSL50964_BrodieAllMAGs_Globals_SC.txt), the sequences of the detected proteins, and sample metadata file that contains site information for the soil metaproteome samples.

Belowground Biogeochemistry Science Focus Area↗

NASA NTRSDate not supplied

GMAO OSSE Framework in Support of PBL Mission Science

The planetary boundary layer is the bottom layer of the troposphere where most of human activities take place. Atmospheric pollutants are capped by the temperature inversion layer in PBL. The thickness of PBL, ranging from tens of meter to several kilometer, affects pollutant dispersion and air quality. The thickness of PBL typically shows a strong diurnal cycle but it is difficult to model and predict its change because complicated dynamic and thermodynamic processes involved with air-surface exchange of temperature and moisture, convective mixing, surface friction, topography, advection and radiation heating and cooling influence the PBL height. Various parameterization schemes for PBL were developed but the underlying processes of PBL are neither clearly understood nor represented in NWP models and adding large uncertainty into weather and climate predictions. There are no systematic global observations to provide information on thermodynamic structure of PBL and efforts to explore new spaceborne instruments and measurement techniques are growing. This study aims to develop a PBL OSSE framework leveraging existing GMAO’s OSSE system that utilizes GEOS data assimilation and global forecast model (1) to evaluate existing and potential new observation types for the PBL structure analysis and prediction and (2) to test sensitivity of PBL parameterization schemes to PBL forecasts.

Min-Jeong Kim↗

DOE OSTI2025

Advancing ocean monitoring and knowledge for societal benefit: the urgency to expand Argo to OneArgo by 2030

The ocean plays an essential role in regulating Earth’s climate, influencing weather conditions, providing sustenance for large populations, moderating anthropogenic climate change, encompassing massive biodiversity, and sustaining the global economy. Human activities are changing the oceans, stressing ocean health, threatening the critical services the ocean provides to society, with significant consequences for human well-being and safety, and economic prosperity. Effective and sustainable monitoring of the physical, biogeochemical state and ecosystem structure of the ocean, to enable climate adaptation, carbon management and sustainable marine resource management is urgently needed. The Argo program, a cornerstone of the Global Ocean Observing System (GOOS), has revolutionized ocean observation by providing real-time, freely accessible global temperature and salinity data of the upper 2,000m of the ocean (Core Argo) using cost-effective simple robotics. For the past 25 years, Argo data have underpinned many ocean, climate and weather forecasting services, playing a fundamental role in safeguarding goods and lives. Argo data have enabled clearer assessments of ocean warming, sea level change and underlying driving processes, as well as scientific breakthroughs while supporting public awareness and education. Building on Argo’s success, OneArgo aims to greatly expand Argo’s capabilities by 2030, expanding to full-ocean depth, collecting biogeochemical parameters, and observing the rapidly changing polar regions. Providing a synergistic subsurface and global extension to several key space-based Earth Observation missions and GOOS components, OneArgo will enable biogeochemical and ecosystem forecasting and new long-term climate predictions for which the deep ocean is a key component. Driving forward a revolution in our understanding of marine ecosystems and the poorly-measured polar and deep oceans, OneArgo will be instrumental to assess sea level change, ocean carbon fluxes, acidification and deoxygenation. Emerging OneArgo applications include new views of ocean mixing, ocean bathymetry and sediment transport, and ecosystem resilience assessment. Implementing OneArgo requires about $100 million annually, a significant increase compared to present Argo funding. OneArgo is a strategic and cost-effective investment which will provide decision-makers, in both government and industry, with the critical knowledge needed to navigate the present and future environmental challenges, and safeguard both the ocean and human wellbeing for generations to come.

ARGO↗

NASA NTRS2019

Modeling Phenological Controls on Carbon Dynamics in Dryland Sagebrush Ecosystems

Dryland ecosystems play an important role in determining how precipitation anomalies affect terrestrial carbonfluxes at regional to global scales. Thus, to understand how climate change may affect the global carbon cycle,we must also be able to understand and model its effects on dryland vegetation. Dynamic Global VegetationModels (DGVMs) are an important tool for modeling ecosystem dynamics, but they often struggle to reproduceseasonal patterns of plant productivity. Because the phenological niche of many plant species is linked to bothtotal productivity and competitive interactions with other plants, errors in how process-based models representphenology hinder our ability to predict climate change impacts. This may be particularly problematic in drylandecosystems where many species have developed a complex phenology in response to seasonal variability in bothmoisture and temperature. Here, we examine how uncertainty in key parameters as well as the structure ofexisting phenology routines affect the ability of a DGVM to match seasonal patterns of leaf area index (LAI) andgross primary productivity (GPP) across a temperature and precipitation gradient. First, we optimized modelparameters using a combination of site-level eddy covariance data and remotely-sensed LAI data. Second, wemodified the model to include a semi-deciduous phenology type and added flexibility to the representation ofgrass phenology. While optimizing parameters reduced model bias, the largest gains in model performance wereassociated with the development of our new representation of phenology. This modified model was able to bettercapture seasonal patterns of both leaf area index (R2=0.75) and gross primary productivity (R2=0.84), thoughits ability to estimate total annual GPP depended on using eddy covariance data for optimization. The new modelalso resulted in a more realistic outcome of modeled competition between grass and shrubs. These findingsdemonstrate the importance of improving how DGVMs represent phenology in order to accurately forecastclimate change impacts in dryland ecosystems.

Ecosystem model Phenology Parameter optimization E↗

NASA NTRSDate not supplied

Differential absorption lidar (DIAL) for water vapor and aerosol profiling from airborne and space-based platforms

Many current challenges in weather and climate prediction involve cloud and aerosol processes, which are intimately linked to processes that initiate or take place within the planetary boundary layer (PBL). The current space-based observing system provides a wealth of information on the spatial distribution of key atmospheric variables such as profiles of water vapor (WV) and temperature, but lacks the sensitivity, accuracy, and vertical resolution in the PBL to overcome the observational gaps that inhibit the parametrization and advancement of current climate and weather models. To overcome some of these observational gaps and improve understanding and monitoring of these key processes, mature remote sensing techniques like Differential Absorption Lidar (DIAL) can be employed from various platforms to capture processes on a wide range of spatial scales. This presentation will provide an overview of NASA’s water vapor DIAL capabilities, present the strengths, weaknesses, and synergies of the DIAL technique relative to traditional methods, and provide representative data examples from the HALO airborne water vapor DIAL which was designed as a technology testbed for future space-based DIAL missions as well as a workhorse instrument in support of suborbital process studies. HALO is an airborne multifunction lidar system, simultaneously profiling WV with the DIAL technique and aerosol and cloud optical properties and PBL heights via the high spectral resolution lidar (HSRL) technique. HALO has a compact design that allows it to fly on most research aircraft, enabling nadir profiling from the lower stratosphere down through the PBL, which is critical for studying processes such as convection and cloud formation that can link the PBL and free troposphere. We will end with an outlook on the benefits and challenges of transitioning the mature DIAL technique to space to compliment other active and passive sounders and enable new PBL observations for the future Earth Observing System. The Atmospheric Boundary layer Lidar pathfindEr (ABLE), a program aimed at advancing technologies to enable the first demonstration of DIAL from space with cross-cutting observables of PBL heights, aerosol and cloud profiling, and methane columns from space will also be presented.

Brian J. Carroll↗

NASA NTRS2019

Modeling Phenological Controls on Carbon Dynamics in Dryland Sagebrush Ecosystems

Dryland ecosystems play an important role in determining how precipitation anomalies affect terrestrial carbon fluxes at regional to global scales. Thus, to understand how climate change may affect the global carbon cycle, we must also be able to understand and model its effects on dryland vegetation. Dynamic Global Vegetation Models (DGVMs) are an important tool for modeling ecosystem dynamics, but they often struggle to reproduce seasonal patterns of plant productivity. Because the phenological niche of many plant species is linked to both total productivity and competitive interactions with other plants, errors in how process-based models represent phenology hinder our ability to predict climate change impacts. This may be particularly problematic in dryland ecosystems where many species have developed a complex phenology in response to seasonal variability in both moisture and temperature. Here, we examine how uncertainty in key parameters as well as the structure of existing phenology routines affect the ability of a DGVM to match seasonal patterns of leaf area index (LAI) and gross primary productivity (GPP) across a temperature and precipitation gradient. First, we optimized model parameters using a combination of site-level eddy covariance data and remotely-sensed LAI data. Second, we modified the model to include a semi-deciduous phenology type and added flexibility to the representation of grass phenology. While optimizing parameters reduced model bias, the largest gains in model performance were associated with the development of our new representation of phenology. This modified model was able to better capture seasonal patterns of both leaf area index (R(exp 2) = 0.75) and gross primary productivity (R(exp 2) = 0.84), though its ability to estimate total annual GPP depended on using eddy covariance data for optimization. The new model also resulted in a more realistic outcome of modeled competition between grass and shrubs. These findings demonstrate the importance of improving how DGVMs represent phenology in order to accurately forecast climate change impacts in dryland ecosystems.

Ecosystem model↗

DOE OSTI2026

Computational Modeling of Atmospheric Processes at Texas Southern University

Texas Southern University (TSU) is strengthening its research program in atmospheric chemistry and physics with a climate science emphasis by leveraging partnerships with the U.S. Department of Energy’s Atmospheric Radiation Measurement (ARM) Facility, Brookhaven National Laboratory (BNL), and the Tracking Aerosol Convection Interactions ExpeRiment (TRACER). This RDPP-supported program focuses on secondary organic aerosols (SOAs) and reactive atmospheric species that influence cloud formation, precipitation processes, and radiative forcing. SOAs play a critical role in cloud microphysics and Earth’s energy balance, yet the chemical and physical mechanisms governing SOA–cloud interactions remain a significant source of uncertainty in predictive climate models. Through computational modeling, observational data analysis, and national laboratory collaboration, this program develops a skilled cohort of students trained in atmospheric science, environmental data analysis, and climate-relevant modeling. These research experiences build technical competencies that are transferable to careers in government laboratories, academia, and industry. By engaging students from historically underrepresented communities in high-impact climate research, TSU expands participation in the atmospheric sciences workforce while contributing meaningful scientific insights to DOE-supported ARM research activities. This partnership strengthens national capacity in climate science and supports the development of the next generation of atmospheric researchers.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS2012

Comparative Analysis of Upper Ocean Heat Content Variability from Ensemble Operational Ocean Analyses

Upper ocean heat content (HC) is one of the key indicators of climate variability on many time-scales extending from seasonal to interannual to long-term climate trends. For example, HC in the tropical Pacific provides information on thermocline anomalies that is critical for the longlead forecast skill of ENSO. Since HC variability is also associated with SST variability, a better understanding and monitoring of HC variability can help us understand and forecast SST variability associated with ENSO and other modes such as Indian Ocean Dipole (IOD), Pacific Decadal Oscillation (PDO), Tropical Atlantic Variability (TAV) and Atlantic Multidecadal Oscillation (AMO). An accurate ocean initialization of HC anomalies in coupled climate models could also contribute to skill in decadal climate prediction. Errors, and/or uncertainties, in the estimation of HC variability can be affected by many factors including uncertainties in surface forcings, ocean model biases, and deficiencies in data assimilation schemes. Changes in observing systems can also leave an imprint on the estimated variability. The availability of multiple operational ocean analyses (ORA) that are routinely produced by operational and research centers around the world provides an opportunity to assess uncertainties in HC analyses, to help identify gaps in observing systems as they impact the quality of ORAs and therefore climate model forecasts. A comparison of ORAs also gives an opportunity to identify deficiencies in data assimilation schemes, and can be used as a basis for development of real-time multi-model ensemble HC monitoring products. The OceanObs09 Conference called for an intercomparison of ORAs and use of ORAs for global ocean monitoring. As a follow up, we intercompared HC variations from ten ORAs -- two objective analyses based on in-situ data only and eight model analyses based on ocean data assimilation systems. The mean, annual cycle, interannual variability and longterm trend of HC have been analyzed

Xue, Yan↗

NASA NTRS2007

Improving Land-Surface Model Hydrology: Is an Explicit Aquifer Model Better than a Deeper Soil Profile?

Land surface models (LSMs) are computer programs, similar to weather and climate prediction models, which simulate the storage and movement of water (including soil moisture, snow, evaporation, and runoff) after it falls to the ground as precipitation. It is not currently possible to measure all of the variables of interest everywhere on Earth with sufficient accuracy. Hence LSMs have been developed to integrate the available information, including satellite observations, using powerful computers, in order to track water storage and redistribution. The maps are used to improve weather forecasts, support water resources and agricultural applications, and study the Earth's water cycle and climate variability. Recently, the models have begun to simulate groundwater storage. In this paper, we compare several possible approaches, and examine the pitfalls associated with trying to estimate aquifer parameters (such as porosity) that are required by the models. We find that explicit representation of groundwater, as opposed to the addition of deeper soil layers, considerably decreases the sensitivity of modeled terrestrial water storage to aquifer parameter choices. We also show that approximate knowledge of parameter values is not sufficient to guarantee realistic model performance: because interaction among parameters is significant, they must be prescribed as a harmonious set.

Gulden, L. E.↗

NASA NTRS2004

Evidence of Urban Precipitation Anomalies from Satellite and Ground-Based Measurements

Urbanization is one of the extreme cases of land use change. Most of world s population has moved to urban areas. Although currently only 1.2% of the land is considered urban, the spatial coverage and density of cities are expected to rapidly increase in the near future. It is estimated that by the year 2025,60% of the world s population will live in cities. Human activity in urban environments also alters weather and climate processes. However, our understanding of urbanization on the total Earth-weather-climate system is incomplete. Recent literature continues to provide evidence that anomalies in precipitation exist over and downwind of major cities. Current and future research efforts are actively seeking to verify these literature findings and understand potential cause- effect relationships. The novelty of this study is that it utilizes rainfall data from multiple satellite data sources (e.g. TRMM precipitation radar, TRMM-geosynchronous-rain gauge merged product, and SSM/I) and ground-based measurements to identify spatial anomalies and temporal trends in precipitation for cities around the world. Early results will be presented and placed within the context of weather prediction, climate assessment, and societal applications.

Shepherd, J. M.↗

NASA NTRS2004

Evidence of Urban Precipitation Anomalies from Satellite and Ground-Based Measurements

Urbanization is one of the extreme cases of land use change. Most of world's population has moved to urban areas. Although currently only 1.2% of the land is considered urban, the spatial coverage and density of cities are expected to rapidly increase in the near future. It is estimated that by the year 2025, 60% of the world's population will live in cities. Human activity in urban environments also alters weather and climate processes. However, our understanding of urbanization on the total Earth-weather-climate system is incomplete. Recent literature continues to provide evidence that anomalies in precipitation exist over and downwind of major cities. Current and future research efforts are actively seeking to verify these literature findings and understand potential cause-effect relationships. The novelty of this study is that it utilizes rainfall data from multiple satellite data sources (e.g. TRMM precipitation radar, TRMM-geosynchronous-rain gauge merged product, and SSM/I) and ground-based measurements to identify spatial anomalies and temporal trends in precipitation for cities around the world. Early results will be presented and placed within the context of weather prediction, climate assessment, and societal applications.

Shepherd, J. Marshall↗

DOE OSTI2023

Importance of ice nucleation and precipitation on climate with the Parameterization of Unified Microphysics Across Scales version 1 (PUMASv1)

Cloud microphysics is critical for weather and climate prediction. In this work, we document updates and corrections to the cloud microphysical scheme used in the Community Earth System Model (CESM) and other models. These updates include a new nomenclature for the scheme, now called Parameterization of Unified Microphysics Across Scales (PUMAS), and the ability to run the scheme on graphics processing units (GPUs). The main science changes include refactoring an ice number limiter and associated changes to ice nucleation, adding vapor deposition onto snow, and introducing an implicit numerical treatment for sedimentation. We also detail the improvements in computational performance that can be achieved with GPU acceleration. We then show the impact of these scheme changes on the (a) mean state climate, (b) cloud feedback response to warming, and (c) aerosol forcing. We find that corrections are needed to the immersion freezing parameterization and that ice nucleation has important impacts on climate. We also find that the revised scheme produces less cloud liquid and ice but that this can be adjusted by changing the loss process for cloud liquid (autoconversion). Furthermore, there are few discernible effects of the PUMAS changes on cloud feedbacks but some reductions in the magnitude of aerosol–cloud interactions (ACIs). Small cloud feedback changes appear to be related to the implicit sedimentation scheme, with a number of factors affecting ACIs.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS2023

Importance of Ice Nucleation and Precipitation on Climate With the Parameterization of Unified Microphysics Across Scales Version 1 (PUMASv1)

Clouds↗

NASA NTRS2004

How Cities Make Their Own Weather

Urbanization is one of the extreme cases of land use change. Most of world's population has moved to urban areas. Although currently only 1.2% of the land is considered urban, the spatial coverage and density of cities are expected to rapidly increase in d e near future. It is estimated that by the year 2025, 60% of the world's population will live in cities. Human activity in urban environments also alters weather and climate processes. However, our understanding of urbanization on the total Earth-weather-climate system is incomplete. Recent literature continues to provide evidence that anomalies in precipitation exist over and downwind of major cities. Current and future research efforts are actively seeking to verify these literature findings and understand potential cause-effect relationships. The novelty of this study is that it utilizes rainfall data from multiple satellite data sources (e.g. TRMM precipitation radar, TRMM-geosynchronous-rain gauge merged product, and SSM/I) and ground-based measurements to identify spatial anomalies and temporal trends in precipitation for cities around the world. We will also present results from experiments using a regional atmospheric-land surface modeling system. Early results will be presented and placed within the context of weather prediction, climate assessment, and societal applications.

Shepherd, J. Marshall↗

NASA NTRS2022

The TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI). Part III: Simulated Observables - The Return of the Spectrum

The TRAPPIST-1 Habitable Atmosphere Intercomparison (THAI) is a community project that aims to quantify how differences in general circulation models (GCMs) could impact the climate prediction for TRAPPIST-le and, subsequently its atmospheric characterization in transit. Four GCMs have participated in THAI so far: ExoCAM, LMD-Generic, ROCKE-3D and the UM. This paper, focused on the simulated observations, is the third part of a trilogy, following the analysis of two land planet scenarios (part I) and two aquaplanet scenarios (part II). Here, we show a robust agreement between the simulated spectra and the number of transits estimated to detect the land planet atmospheres. For the cloudy aquaplanet ones, a 5-σ detection of CO2 could be achieved in about 10 transits if the atmosphere contains at least 1 bar of CO2. That number can vary by 41- 56% depending on the GCM used to predict the terminator profiles, principally due to differences in the cloud deck altitude, with ExoCAM and LMD-G producing higher clouds than ROCKE-3D and UM. Therefore, for the first time, this work provides "GCM uncertainty error bars" of ~ 50% that need to be considered in future analyses of transmission spectra. We also analyzed the inter-transit variability induced by weather patterns and changes of terminator cloudiness between transits. Its magnitude differs significantly between the GCMs but its impact on the transmission spectra is within the measurement uncertainties. THAI has demonstrated the importance of model intercomparison for exoplanets and also paved the way for a larger project to develop an intercomparison meta-framework, namely the Climates Using Interactive Suites of Intercomparisons Nested for Exoplanet Studies (CUISINES).

Exoplanet atmospheres↗

NASA NTRS2005

Evaluation of Ten Methods for Initializing a Land Surface Model

Land surface models (LSMs) are computer programs, similar to weather and climate prediction models, which simulate the stocks and fluxes of water (including soil moisture, snow, evaporation, and runoff) and energy (including the temperature of and sensible heat released from the soil) after they arrive on the land surface as precipitation and sunlight. It is not currently possible to measure all of the variables of interest everywhere on Earth with sufficient accuracy and space-time resolution. Hence LSMs have been developed to integrate the available observations with our understanding of the physical processes involved, using powerful computers, in order to map these stocks and fluxes as they change in time. The maps are used to improve weather forecasts, support water resources and agricultural applications, and study the Earth"s water cycle and climate variability. NASA"s Global Land Data Assimilation System (GLDAS) project facilitates testing of several different LSMs with a variety of input datasets (e.g., precipitation, plant type).

Rodell, M.↗

NASA NTRS2014

Uncertainties in Predicting Rice Yield by Current Crop Models Under a Wide Range of Climatic Conditions

Predicting rice (Oryza sativa) productivity under future climates is important for global food security. Ecophysiological crop models in combination with climate model outputs are commonly used in yield prediction, but uncertainties associated with crop models remain largely unquantified. We evaluated 13 rice models against multi-year experimental yield data at four sites with diverse climatic conditions in Asia and examined whether different modeling approaches on major physiological processes attribute to the uncertainties of prediction to field measured yields and to the uncertainties of sensitivity to changes in temperature and CO2 concentration [CO2]. We also examined whether a use of an ensemble of crop models can reduce the uncertainties. Individual models did not consistently reproduce both experimental and regional yields well, and uncertainty was larger at the warmest and coolest sites. The variation in yield projections was larger among crop models than variation resulting from 16 global climate model-based scenarios. However, the mean of predictions of all crop models reproduced experimental data, with an uncertainty of less than 10 percent of measured yields. Using an ensemble of eight models calibrated only for phenology or five models calibrated in detail resulted in the uncertainty equivalent to that of the measured yield in well-controlled agronomic field experiments. Sensitivity analysis indicates the necessity to improve the accuracy in predicting both biomass and harvest index in response to increasing [CO2] and temperature.

crop-model ensembles↗

NASA NTRS2017

The Relationships Between the Trends of Mean and Extreme Precipitation

This study provides a better understanding of the relationships between the trends of mean and extreme precipitation in two observed precipitation data sets: the Climate Prediction Center Unified daily precipitation data set and the Global Precipitation Climatology Program (GPCP) pentad data set. The study employs three kinds of definitions of extreme precipitation: (1) percentile, (2) standard deviation and (3) generalize extreme value (GEV) distribution analysis for extreme events based on local statistics. Relationship between trends in the mean and extreme precipitation is identified with a novel metric, i.e. area aggregated matching ratio (AAMR) computed on regional and global scales. Generally, more (less) extreme events are likely to occur in regions with a positive (negative) mean trend. The match between the mean and extreme trends deteriorates for increasingly heavy precipitation events. The AAMR is higher in regions with negative mean trends than in regions with positive mean trends, suggesting a higher likelihood of severe dry events, compared with heavy rain events in a warming climate. AAMR is found to be higher in tropics and oceans than in the extratropics and land regions, reflecting a higher degree of randomness and more important dynamical rather than thermodynamical contributions of extreme events in the latter regions.

global warming↗