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DOE OSTI2024

Towards verifiable cancer digital twins: tissue level modeling protocol for precision medicine

Cancer exhibits substantial heterogeneity, manifesting as distinct morphological and molecular variations across tumors, which frequently undermines the efficacy of conventional oncological treatments. Developments in multiomics and sequencing technologies have paved the way for unraveling this heterogeneity. Nevertheless, the complexity of the data gathered from these methods cannot be fully interpreted through multimodal data analysis alone. Mathematical modeling plays a crucial role in delineating the underlying mechanisms to explain sources of heterogeneity using patient-specific data. Intra-tumoral diversity necessitates the development of precision oncology therapies utilizing multiphysics, multiscale mathematical models for cancer. This review discusses recent advancements in computational methodologies for precision oncology, highlighting the potential of cancer digital twins to enhance patient-specific decision-making in clinical settings. We review computational efforts in building patient-informed cellular and tissue-level models for cancer and propose a computational framework that utilizes agent-based modeling as an effective conduit to integrate cancer systems models that encode signaling at the cellular scale with digital twin models that predict tissue-level response in a tumor microenvironment customized to patient information. Furthermore, we discuss machine learning approaches to building surrogates for these complex mathematical models. These surrogates can potentially be used to conduct sensitivity analysis, verification, validation, and uncertainty quantification, which is especially important for tumor studies due to their dynamic nature.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2023

Modeling the effects of carbon payments and forest owner cooperatives on carbon storage and revenue in Pacific Northwest forestlands

The forestlands of the Pacific Northwest store a significant amount of carbon, provide wildlife habitat, generate revenue for forestland owners, and provide for sustainable generation of forest products. Promoting forest carbon storage is increasingly recognized as a key management objective to mitigate climate change. We developed an agent-based model to examine the effectiveness of current land management practices in sustaining forest carbon storage and revenue flows, and the utility of market-based carbon payments in improving carbon storage while also improving revenue generation in the Pacific Northwest. We find that while market based incentives can improve both forest carbon storage and revenue, they are limited in their benefit to small forest owners. Our results highlight the crucial need for additional policy interventions to reduce barriers to market access for small private owners and ensure sustainable forest management in this region. We further show that a forest owners’ cooperative, which aggregates small owners to reduce the costs of participating in a carbon market, can help overcome these barriers and result in both greater carbon storage and a more equitable benefit from carbon payments.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Assessing the Performance of a Circular Economy for Wind Energy Technologies: A Summary of Three Analytical Tools

A circular economy emphasizes the efficient use of all resources and presents opportunities for addressing series of economic and environmental objectives at local, regional, and national levels. Despite anticipated overall benefits to society, the transition to a circular economy is likely to create regional differences in impacts. As a result, it is important to evaluate the performance and tradeoffs associated with circular economy transitions. This poster summaries three previously published analytical tools that were used to assess the performance of developing a circular economy for wind energy technologies: the Renewable Energy Materials Properties Database (REMPD), a circular economy agent-based model for wind blades (CE Wind ABM), and the Circular Economy Lifecycle Assessment and Visualization (CELAVI) framework. The REMPD is a comprehensive database of materials used in wind and solar plants, including material quantities and physical materials availability. The CE Wind ABM allows us to understand how wind stakeholders' end-of-life behaviors influence wind blade circularity and evaluate the impact of regional variables (e.g., logistics and transportation). And, the CELAVI framework is a modular framework that can be used to evaluate the impacts associated with circular economy transitions. These three analytical tools have been applied to evaluate circular economy transitions for wind energy technologies and they could be expanded to other technologies and products.

agent-based modeling↗

DOE OSTI2024

An integrated transportation-power system model for a decarbonizing world

Rising demand for electricity from electric vehicles (EVs) will require new paradigms to guarantee reliable and low-cost electricity. This study couples an agent-based travel demand simulator and an electricity grid model to assess the economic costs of supplying power to meet EVs' added demand across the Chicago region. Results suggest that shifting from personal EVs to a fleet of shared, fully-automated all-electric vehicles (SAEVs) could lower per-mile emissions, congestion, and embodied vehicle and charging infrastructure emissions. Further, the results should compel policymakers to shift the cost of providing power onto commercial customers, like electric ride-hail fleets, through price-indexed electricity prices, which can shift charging to off-peak periods or away from resource-scarce hours.

Integrated modeling↗

DOE OSTI2021

Distributed Solar Adoption in Orlando: A Household-Level Model for Distribution Resource Planning

Potential for rooftop solar in Florida is massive (47% of retail sales, 3rd overall nationally), yet adoption lags (12th nationally). A 2018 Florida Public Service Commission ruling authorizing solar third-party ownership (leasing) has substantially increased attention on distributed solar in the state. The city of Orlando has committed to a 100% clean-energy target by 2050 and deployment of solar and storage are expected to contribute significantly to reaching the goal. Deployment of customer-adopted solar, unlike utility-procured solar, is uncertain, but known to be spatially correlated with demographic factors and existing adoption. We develop a new method to adapt NREL's dGen model in order to represent building-level agents in adoption forecasts for the Orlando Utility Commission (OUC) service territory. Using the agent-based model we develop projections of solar adoption, subject to scenarios varying future solar costs and valuation, and aggregate adoption predictions by OUC distribution feeder. We find substantial spatial heterogeneity in the projected level of adoption by OUC distribution feeder. For instance, 25% of all projected adoption through 2050 would be concentrated on just 5% of feeders and 88% of projected adoption on 50% of feeders. Because of the uncertainty in adoption, bottoms-up solar adoption forecasting methods at the household-level are integral to long-term resource planning by anticipating system needs as customers increasingly adopt distributed solar, storage, electric vehicles, and other distributed energy resources.

14 SOLAR ENERGY↗

DOE OSTI2021

Role of the social factors in success of solar photovoltaic reuse and recycle programmes

By 2050, the cumulative mass of end-of-life photovoltaic (PV) modules may reach 80 Mt globally. The impacts could be mitigated by module recycling, repair and reuse; however, previous studies of PV circularity omit the consideration of critical social factors. Here we used an agent-based model to integrate social aspects with techno-economic factors, which provides a more realistic assessment of the circularity potential for previously studied interventions that assesses additional interventions that cannot be analysed using techno-economic analysis alone. We also performed a global sensitivity analysis using a machine-learning metamodel. We show that to exclude social factors underestimates the effect of lower recycling prices on PV material circularity, which highlights the relevance of considering social factors in future studies. Interventions aimed at changing customer attitudes about used PV boost the reuse of modules, although used modules can only satisfy one-third of the US demand during 2020–2050, which suggests that reuse should be complemented by recycling.

14 SOLAR ENERGY↗

DOE OSTI2022

Regional Representation of Wind Stakeholders' End-of-Life Behaviors and Their Impact on Wind Blade Circularity

Wind plant power has seen tremendous growth in the US and worldwide, representing the most significant renewable energy installed capacity besides hydropower. While wind power enables decarbonizing the electricity grid, the rising amount of end-of-life (EOL) wind blades - which are arduous to recycle - present a challenge for landfills if disposed of whole and a missed opportunity to recover valuable composite materials. The circular economy (CE) concept proposes strategies to rethink, reuse and recover products, components, and materials. However, transitioning to a CE implies changing how business models, supply chains, and behaviors deal with products and waste; changes arduously captured with traditional methods used to assess circularity such as life cycle assessment or material flow analysis (MFA). Here we present an agent-based model (ABM) that captures behavioral aspects impacting wind blade circularity in the US. The ABM also accounts for wind plant projects and landfills heterogeneity - a characteristic not easily included in top-down approaches such as MFA, input-output analysis, or system dynamics. Results show that recycling is divided as most recycling facilities are on the eastern side of the country, a challenge that could be alleviated by shredding blades before transportation. Recycling programs from the wind industry could also seed recycling behaviors within wind plant owners. Better yet, new blade designs could increase circularity if original equipment manufacturers accept the risks involved with the investments needed to adapt the production lines.

17 WIND ENERGY↗

DOE OSTI2021

Farmer characteristics and decision-making: A model for bioenergy crop adoption

We report the commercial development of biofuels and bioproducts depends on whether renewable biomass feedstock is available while not directly competing with the production of food. Farmers are one of the most important stakeholders in the biofuel supply chain and confront a range of uncertainties while entering the bioenergy market. Their decision-making process is extremely complex and rarely purely rational. Modeling farmer behavior requires considering a wide range of individual-level factors, socio-temporal dynamics, institutional settings, and their interactions. These characteristics make agent-based modeling a suitable framework for evaluating such systems. We developed a model to simulate farmer bioenergy crop adoption behavior across a 50-county study region in Nebraska, Kansas, and Colorado. The analysis considers adoption decisions for two bioenergy feedstocks, crop residues and energy crops. We examine the influence of individual and farm characteristics, market structure, social networks, and media influence on farmer adoption decisions. Our results indicate that different factors can have varied impacts on the speed of adoption for the crop residues and energy crops. Identifying levers that have the most impact on grower adoption can inform the design of interventions both from policy and private sector standpoints with important implications for the future the bioenergy industry.

09 BIOMASS FUELS↗

DOE OSTI2020

Impact of climate change on adaptive management decisions in the face of water scarcity

Reoccurring drought through the early 2000s has caused a serious water scarcity issue in the Colorado River Basin. Previous modeling studies have focused on the impact of climate change without considering the adaptive behaviors of farmers and under-utilized Indian water rights. Here, we use a coupled agent-based water resource model (ABM) to investigate how the adaptive decisions of farmers can affect water resource management under both climate change impacts and fully utilized Indian water right conditions. We used five General Circulation Model projections with RCP8.5 scenarios for the study. The results of farm-level decision-making showed different responses in irrigated areas that were changing due to climate change impact. While winter precipitation changes might partially explain the behavior changes, no specific pattern could be concluded based on their location. Also, farmers’ responses about annual water diversion showed more significant inter-year variation compared to irrigated areas. Basin-level metrics showed that climate change impacts will generally worsen water scarcity issues as measured in Navajo Reservoir storage, flow to Lake Powell, and instream flow requirement. But these basin-level water scarcity metrics cannot reflect individual farm-level impacts under climate change, which is why modeling the bottom-up management actions is necessary. When the under-utilized Indian water rights are fully used, it is more likely to trigger the shortage sharing agreement due to the higher tribal water depletion. Evaluation of model uncertainty and a more realistic setup for adaptive actions under drought contingency plans are suggested for future research.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Think before you throw! An analysis of behavioral interventions targeting PET bottle recycling in the United States

The United States generates 42 Mt of plastic waste each year and is one of the biggest contributors to ocean plastic waste. Consequently, plastic has become synonymous with the linear economy, and many scholars are studying and proposing circular economy solutions to mitigate plastic pollution. Recycling has received much attention from both social sciences and engineering as a circular economy strategy, but no study has yet quantified how behavioral interventions could asymmetrically affect different populations. Here, this study combines agent-based modeling, material flow analysis, system dynamics, and life cycle assessment to assess the effect of four behavioral interventions on the collection rates of polyethylene terephthalate bottle waste, displaced virgin plastic manufacturing, and avoided greenhouse gas (GHG) emissions. Results show that, while behavioral interventions would require about 300–900 GJ of additional energy at end-of-life due to improved collection rates, they would avoid about 500–700 thousand metric tons of GHG emissions. Results also illustrate the importance of habits in disposal behaviors and show that different forms of interventions can be better adapted to particular social contexts than others. While the circular economy and its application to plastic waste should certainly not be restricted to recycling, this study demonstrates that improved collection rates and recycling technologies can contribute to reducing the amount of plastic waste polluting our oceans.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

DOE OSTI2021

An investigation of hard-disk drive circularity accounting for socio-technical dynamics and data uncertainty

The installed data storage capacity in the U.S. will reach 2.2 Zettabytes by 2025, generating about 50 million units of end-of-life (EOL) hard-disk drives (HDDs) per year. Due to data security concerns, most EOL HDDs are currently shredded (even when still functioning), representing an economic loss. Moreover, raw material extraction linked to the increased demand for storage causes environmental impacts. Besides mitigating the threat posed by sudden restrictions of raw materials, the circular economy (CE) offers to maximize value retention in the economy and reduce the environmental impacts of human activities. Common CE strategies are reusing and recycling products. However, the reuse of hard disk drives is currently burdened by the lack of trust HDD end-users have toward other non-physical means of data removal than shredding. Here, an agent-based modeling (ABM) approach is proposed to explore how techno-economic and social factors affect end-users' decisions to adopt EOL management practices other than shredding. The proposed method also accounts for data uncertainty by applying a semi-quantitative approach. Results demonstrate how increased green procurement and more robust standards could spur end-users' trust toward data-wiping technologies. Even when accounting for uncertainty, HDDs' reuse brings better environmental and economic benefits than HDD shredding followed by material recovery. The semi-quantitative approach proposed in this study could be more universally applied in future ABM, especially given the often-stochastic nature of such models. The developed ABM is also the first to represent several HDD industry stakeholders and demonstrate how the HDD shredding lock-in situation could be resolved.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

DOE OSTI2023

Evaluating the incentive for soil organic carbon sequestration from carinata production in the Southeast United States

Soil organic carbon (SOC) can be increased by cultivating bioenergy crops to produce low-carbon fuels, improving soil quality and agricultural productivity. This study evaluates the incentives for farmers to sequester SOC by adopting a bioenergy crop, carinata. Two agricultural management scenarios – business as usual (BaU) and a climate-smart (no-till) practice – were simulated using an agent-based modeling approach to account for farmers’ carinata adoption rates within their context of traditional crop rotations, the associated profitability, influences of neighboring farmers, as well as their individual attitudes. Here, using the state of Georgia, US, as a case study, the results show that farmers allocated 1056 × 10 3 acres (23.8%; 2.47 acres is equivalent to 1 ha) of farmlands by 2050 at a contract price of $\$6.5$ per bushel of carinata seeds and with an incentive of $50Mg -1 CO2e SOC sequestered under the BaU scenario. In contrast, at the same contract price and SOC incentive rate, farmers allocated 1152 × 10 3 acres (25.9%) of land under the no-till scenario, while the SOC sequestration was 483.83 × 10 3 Mg CO2e, which is nearly four times the amount under the BaU scenario. Thus, this study demonstrated combinations of seed prices and SOC incentives that encourage farmers to adopt carinata with climate-smart practices to attain higher SOC sequestration benefits.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

A subcellular biochemical model for T6SS dynamics reveals winning competitive strategies

Abstract The type VI secretion system (T6SS) is a broadly distributed interbacterial weapon that can be used to eliminate competing bacterial populations. Although unarmed target populations are typically used to study T6SS function in vitro, bacteria most likely encounter other T6SS-armed competitors in nature. However, the connection between subcellular details of the T6SS and the outcomes of such mutually lethal battles is not well understood. Here, we incorporate biological data derived from natural competitors of Vibrio fischeri light organ symbionts to build a biochemical model for T6SS at the single-cell level, which we then integrate into an agent-based model (ABM). Using the ABM, we isolate and experiment with strain-specific physiological differences between competitors in ways not possible with biological samples to identify winning strategies for T6SS-armed populations. Through in vitro experiments, we discover that strain-specific differences exist in T6SS activation speed. ABM simulations corroborate that faster activation is dominant in determining survival during competition. Once competitors are fully activated, the energy required for T6SS creates a tipping point where increased weapon building and firing becomes too costly to be advantageous. Through ABM simulations, we identify the threshold where this transition occurs in the T6SS parameter space. We also find that competitive outcomes depend on the geometry of the battlefield: unarmed target cells survive at the edges of a range expansion where unlimited territory can be claimed. Alternatively, competitions within a confined space, much like the light organ crypts where natural V. fischeri compete, result in the rapid elimination of the unarmed population.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2025

A mesoscopic link-transmission-model able to track individual vehicles

Macroscopic traffic flow is a common choice for large-scale traffic simulations. These models do not provide individual-specific metrics as outputs. However, this treatment is necessary in agent-based-models, as in, for example, assigning routes based on personal characteristics. Here, in this paper, we propose an extension of the link-transmission-model, an efficient and yet accurate discretization of the Lighthill-Whitham-Richards (LWR) model, which allow vehicles to be tracked individually while keeping the main features of the underlying model. The extension comprises modifying the link and node models to ensure that the flow between links is always at discrete levels. Therefore, every unit of flow is associated with one individual vehicle moving from its current to its next link. An upper bound of the discretization error is provided. We show that the proposed model resembles its continuous counterpart on lane drop, merge, and diverge cases. In addition, we apply the model into three different networks to validate its applicability in large networks. Finally, we also confirm the parameter transferability between continuous and discrete models and that both can well reproduce field data.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2024

Parking Strategies and Outcomes for Shared Autonomous Vehicle Fleet Operations

Parking spots are a premium commodity, especially in dense downtown settings, so this study examines the service impacts of shared autonomous vehicles (SAVs) parking in legal on- or off-street locations when idle across Travis County in Austin, Texas. Here, using an agent-based activity-based travel demand model with dynamic traffic simulation, two restricted-parking strategies for SAVs were simulated. SAVs either found the nearest available parking spot or the lowest-cost spot (via a tradeoff of parking fees and distance-based costs). Two comparisons were conducted to analyze the impacts of these strategies. First, two restricted parking strategies were compared, where SAVs park without competition with private human-driven vehicles (HVs) for parking locations. Second, a more realistic analysis compared two SAV parking strategies with a scenario where SAVs remain idle in place. Private HVs in all scenarios and strategies of this comparison park at the closest designated location unless they opt for private parking. Using a supply of 8,400 aggregated parking locations in Austin, this study simulated fleet performance under different trip demands, with SAV fares of $\$0.62$ per kilometer ($\$1$ per mile) plus a $\$1$ fixed pickup fee with dynamic ridesharing permitted. Parking costs were negligible in both SAV parking search strategies applied to the Austin network because of the region’s provision of mostly free parking. Requiring SAVs to park on designated on- and off-street parking locations and parking lots (restricted parking) also increased parking costs for HV drivers by up to 22% since SAVs occupied some free parking spaces, especially in the least-cost parking search strategy.

33 ADVANCED PROPULSION SYSTEMS↗

DOE OSTI2024

Wholesale Electricity Market Design to Support Resource Adequacy

Wholesale electricity markets are intended to incentivize system generation investments and operations outcomes that meet evolving system needs. In this work, we evaluate the effectiveness of wholesale market structures, rules and policies in achieving system resource adequacy (RA) and clean energy targets in the presence of self-interested generation investors using the Electricity Markets and Investment Suite Agent-based Simulation (EMIS-AS) model. Results highlight that both capacity markets and operating reserve demand curves (ORDCs) can help achieve a reliable system but with different RA compliance timelines and distribution of generation technologies. Structures with capacity markets tend to favor more capital-intensive peaking technologies while reducing wind and solar build-outs due to suppressed energy and clean energy market prices, particularly in the absence of strong clean energy targets. Conversely, ORDCs improve the commitment of available generation units, but this comes at the expense of higher system costs and renewable generation curtailment. We also find that well-calibrated static capacity demand curves can yield similar reliability and total cost compared to capacity market demand curves informed dynamically by resource adequacy while also yielding stable annual capacity prices. Different approaches to formulating ORDC curves can also yield key trade-offs, namely that a more efficient treatment of storage chronology results in lower ORDC curves and prices, yielding less investment and cost but at the expense of reliability. Finally, the effectiveness of wholesale electricity markets in practically achieving very high clean energy generation targets highly depends on the cost-competitiveness of clean energy technologies that can support critical balancing needs across multiple timescales.

agent based modeling↗

DOE OSTI2025

Zooming in on virtual commutes: Telecommuting impacts on mobility and sustainability

Motivated by a societal shift towards remote work and rapid advancement in information and communication technologies, this study examines the impact of telecommuting on urban mobility across the nine counties of the San Francisco Bay Area, California. Utilizing a behaviorally realistic integrated agent-based transportation model and recent data on telecommuting patterns, we simulate the impact of multiple telecommuting scenarios on transportation system outcomes. This provides a comprehensive picture of the impact of remote work on travel costs and accessibility of all travelers, factoring in changes in mode use and congestion. We analyze how telecommuting influences broader societal factors such as transportation energy consumption. Our findings indicate that increased telecommuting reduces overall person miles traveled and transportation energy consumption. Furthermore, telecommuting results in externality benefits by improving accessibility and reducing commute times for non-telecommuters.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2021

A system of shared autonomous vehicles for Chicago: Understanding the effects of geofencing the service

With autonomous vehicles (AVs) still in the testing phase, researchers and planners must resort to simulation techniques to explore possible futures regarding shared and automated mobility. An agent-based discrete-event transport simulator, POLARIS, is used in this study to simulate travel in the 20-county Chicago region with a shared AV (SAV) mobility option. Using this framework, the effect of an SAV fleet on system performance when constrained to serve within geofences is studied under four distinct scenarios: service restricted to the city, to the city plus suburban core, to the core plus exurban areas, and to the entire region — along with the choice of dynamic ridesharing (DRS) versus solo travel in an SAV. Results indicate that service areas need a balanced mix of trip generators and attractors, and an SAV fleet’s empty VMT (eVMT) can be noticeably reduced through suitable geofencing and DRS. Geofences can also help lower response times, reduce systemwide VMT across all modes, and ensure uniform access to SAVs. DRS is most useful in lowering VMT and %eVMT that arises from sprawled land development, but with insufficient demand to share rides, savings from the use of geofences is higher. Geofences targeting neighborhoods with high trip density bring about low response times and %eVMT, but fleet sizes in these regions need to be designed for uniformly low response times throughout a large region, as opposed to maximizing vehicle use in a 24-hour day.

33 ADVANCED PROPULSION SYSTEMS↗