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At least 181 records · Page 10

A Conservative Finite-Volume Based Interface-Tracking Algorithm Using the Signed Distance Function

Methods for tracking an interface between two fluid phases are developed to ensure desired fluid properties, conservation, and stability are preserved in a finitevolume (FV) discretization. Here, the interface is tracked using a level set method where the signed distance function implicitly defines the interface. Marching methods are used to evaluate the value of the signed distance function, including a novel initialization method to initialize any implicit function to the signed distance function around sharp corners in the level set. Global conservation and consistency with a set of governing equations is enforced by a compression coefficient that measures the volumetric compression or expansion due to inaccuracies in the level set evaluation. A redistribution method is integrated into the volume correction to eliminate the small-cell instability while maintaining global conservation. This suite of methods is implemented and tested using static uniform velocity, and potential flow cases with multiple interface geometries. Results show these methods achieve up to second order accuracy, and are conservative. The application for these methods is intended to track the interface of a 3D printing filament in a finite-volume discretization of the all-speed Navier-Stokes equations.

42 ENGINEERING↗

Extending Imaging Volume in Soft X‐Ray Tomography

Soft X‐ray tomography offers rapid imaging of whole, single cells with a few tens of nanometers spatial resolution without fixation or labeling. Herein, this technique is limited to specimens about 10 μm thick, such that applications of soft X‐ray tomography of large human cells or multicellular specimens are not possible. A theoretical and experimental framework for soft X‐ray tomography that enables extension of imaging volumes to 18 μm‐thick specimens is developed. This approach, based on long depth of field and half‐acquisition tomography, is easily applicable to microscopes equipped with a full‐rotation specimen stage. This opens opportunities for imaging large human cells, such as those commonly seen in cancer research, as well as cell‐to‐cell interactions, where two or more cells occupy the same imaging volume.

Ekman, Axel↗

A phased workflow to define permit‐ready locations for large volume CO 2 injection and storage

Abstract To‐date, only two UIC Class VI permits have been issued by the US Environmental Protection Agency. We illustrate a four‐phase workflow to first identify regional storage resources and then down‐select sites to yield permit‐ready locations that can accept and store large volumes of CO 2 . Specific permit requirements should guide objectives and define deliverables of respective workflow phases. In the first phase we used available regional data and screened structure and injection zones to locate resources that match CO 2 volumes planned to be captured. Available data were also used to assess presence and depth of usable groundwater, the key resource being protected via permitting. We then used advanced, closed‐form, analytical solutions (EASiTool) to estimate CO 2 injectivity into each hydrologically connected injection compartment. In the second phase we acquired and conditioned additional wireline logs and leased available seismic datasets. We interpreted the depositional systems from wireline well‐log character and mapped sandbody geometry to interpolate injection and confining‐zone distribution. Using available data, we mapped faults and locations of freshwater and overpressure (or other capacity‐limiting geologic parameters) in more detail. In the third phase, we used the augmented geologic data to develop a static model for the selected area, extracted the areas of highest interest, and generated and ran dynamic (flow) models. In a fourth phase, we reduced major uncertainties identified in earlier phases. Our case study indicates that to complete preparation of a permit application requires (1) improved lithologic characterization information (thicknesses and horizontal and vertical connectivity) and (2) better definition of poorly defined local faults. © 2023 The Authors. Greenhouse Gases: Science and Technology published by Society of Chemical Industry and John Wiley & Sons Ltd.

58 GEOSCIENCES↗

Modeling inter‐reader variability in clinical target volume delineation for soft tissue sarcomas using diffusion model

Abstract Background Accurate delineation of the clinical target volume (CTV) is essential in the radiotherapy treatment of soft tissue sarcomas. However, this process is subject to inter‐reader variability due to the need for clinical assessment of risk and extent of potential microscopic spread. This can lead to inconsistencies in treatment planning, potentially impacting treatment outcomes. Most existing automatic CTV delineation methods do not account for this variability and can only generate a single CTV for each case. Purpose This study aims to develop a deep learning‐based technique to generate multiple CTV contours for each case, simulating the inter‐reader variability in the clinical practice. Methods We employed a publicly available dataset consisting of fluorodeoxyglucose positron emission tomography (FDG‐PET), x‐ray computed tomography (CT), and pre‐contrast T1‐weighted magnetic resonance imaging (MRI) scans from 51 patients with soft tissue sarcoma, along with an independent validation set containing five additional patients. An experienced reader drew a contour of the gross tumor volume (GTV) for each patient based on multi‐modality images. Subsequently, two additional readers, together with the first one, were responsible for contouring three CTVs in total based on the GTV. We developed a diffusion model‐based deep learning method that is capable of generating arbitrary number of different and plausible CTVs to mimic the inter‐reader variability in CTV delineation. The proposed model incorporates a separate encoder to extract features from the GTV masks, leveraging the critical role of GTV information in accurate CTV delineation. Results The proposed diffusion model demonstrated superior performance with the highest Dice Index (0.902 compared to values below 0.881 for state‐of‐the‐art models) and the best generalized energy distance (GED) (0.209 compared to values exceeding 0.221 for state‐of‐the‐art models). It also achieved the second‐highest recall and precision metrics among the compared ambiguous image segmentation models. Results from both datasets exhibited consistent trends, reinforcing the reliability of our findings. Additionally, ablation studies exploring different model structures and input configurations highlighted the significance of incorporating prior GTV information for accurate CTV delineation. Conclusions The proposed diffusion model successfully generates multiple plausible CTV contours for soft tissue sarcomas, effectively capturing inter‐reader variability in CTV delineation.

Dong, Yafei [Yale Biomedical Imaging Institute Yal↗

Large-Volume Injection and Assessment of Reference Standards for n -Alkane δD and δ 13 C Analysis via Gas Chromatography Isotope Ratio Mass Spectrometry

Compound-specific stable isotope analysis of hydrogen (δD) and carbon (δ 13 C) in organic compounds is a valuable tool in biogeochemical research. A key limitation of this method is the relatively large amount of sample required to achieve desirable precision. We developed a large-volume (20 μL) injection method that allows for high throughput analysis of less concentrated samples and tested it for δ 13 C and δD measurements of n-alkanes. We also conducted a comparison of reference standards and assessed several methods to normalize and correct n-alkane δD and δ13C measurements. The mean precision of the δD method based on 233 environmental n-alkane samples (two to three replications per sample) is 4.0‰ (1σ, estimated from the weighted mean of the pooled unbiased standard deviations) and 0.46‰ (1σ) for δ 13 C from 37 environmental samples (two to three replications per sample). The evaluation of reference standards shows that the use of n-alkane standards with large offsets in δD values in adjacent n-alkane chains can lead to biases in measurement correction. The large-volume injection method shows good reproducibility of δ 13 C and δD measurements of n-alkanes and reduces the required sample concentration by about 80%. We propose that for δD measurements, a reference standard set should be used in which each reference standard has a limited range of δD values and no adjacent n-alkane chains, to minimize memory effects.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Finite- and infinite-volume study of DDπ scattering

We develop a comprehensive framework for extracting the pole position and properties of the doubly-charmed tetraquark $T$$^{+}_{cc}$(3875) from lattice QCD data using the relativistic three-particle formalism. This approach incorporates the effect of the one-pion exchange diagram in DDπ and DD ∗ scattering, making it applicable at energies coinciding with the left-hand cut in the partial-wave projected DD ∗ amplitude. We present an example application of this framework to existing lattice QCD data at mπ = 280 MeV. We solve the integral equations describing the DDπ reaction, use LSZ reduction to determine the corresponding DD ∗ amplitude, and find the values of the infinite-volume two- and three-body K matrices that lead to agreement with lattice DD ∗ phase shifts within their uncertainties. Using these K matrices in the three-particle quantization condition, we describe the finite- volume DD ∗ spectrum and find good agreement with the lattice QCD energies. Our results suggest that, at this pion mass, the tetraquark appears as a pair of subthreshold complex poles whose precise location strongly depends on the value of the DDπ three-particle K matrix.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Decay amplitudes to three hadrons from finite-volume matrix elements

We derive relations between finite-volume matrix elements and infinite-volume decay amplitudes, for processes with three spinless, degenerate and either identical or non-identical particles in the final state. This generalizes the Lellouch-Lüscher relation for two-particle decays and provides a strategy for extracting three-hadron decay amplitudes using lattice QCD. Unlike for two particles, even in the simplest approximation, one must solve integral equations to obtain the physical decay amplitude, a consequence of the nontrivial finite-state interactions. We first derive the result in a simplified theory with three identical particles, and then present the generalizations needed to study phenomenologically relevant three-pion decays. The specific processes we discuss are the CP-violating K → 3π weak decay, the isospin-breaking η → 3π QCD transition, and the electromagnetic γ* → 3π amplitudes that enter the calculation of the hadronic vacuum polarization contribution to muonic g - 2.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Implementing the finite-volume three-pion scattering formalism across all non-maximal isospins

We present a numerical exploration of the relativistic-field-theory (RFT) formalism for three pions with all possible values of non-maximal isospin, I πππ = 2, 1 and 0. Using the generic-isospin extension of the RFT formalism [1] and applying our open-source Python library to implement the framework, we predict a range of three-pion energies for illustrative values of the two-to-two scattering amplitudes for various finite-volume irreps also with non-zero total momentum P in the finite-volume frame. The results restrict attention to the case of a vanishing intrinsic three-body interaction so that the spectra can be understood as a baseline. In future lattice QCD calculations, deviations from these values will be translated into evidence for intrinsic three-body effects in the various scattering channels.

hadronic spectroscopy↗

Three relativistic neutrons in a finite volume

We generalize the relativistic field-theoretic (RFT) three-particle finite-volume formalism to systems of three identical, massive, spin-1/2 fermions, such as three neutrons. This allows, in principle, for the determination of the three-neutron interaction from the finite-volume spectrum of three-neutron states, which can be obtained from lattice QCD calculations.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Generalized boost transformations in finite volumes and application to Hamiltonian methods

The investigation of hadron interactions within lattice QCD has been facilitated by the well-known quantisation condition, linking scattering phase shifts to finite-volume energies. Additionally, the ability to utilise systems at finite total boosts has been pivotal in smoothly charting the energy-dependent behaviour of these phase shifts. The existing implementations of the quantization condition at finite boosts rely on momentum transformations between rest and moving frames, defined directly in terms of the energy eigenvalues. This energy dependence is unsuitable in the formulation of a Hamiltonian. In this work, we introduce a novel approach to generalise the three-momentum boost prescription, enabling the incorporation of energy-independent finite-volume Hamiltonians within moving frames. We demonstrate the application of our method through numerical comparisons, employing a phenomenological ππ scattering example.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Dark matter raining on DUNE and other large volume detectors

Direct detection is a powerful means of searching for particle physics evidence of dark matter (DM) heavier than about a GeV with o(kiloton) volume, low-threshold detectors. In many scenarios, some fraction of the DM may be boosted to large velocities enhancing and generally modifying possible detection signatures. We investigate the scenario where 100% of the DM is boosted at the Earth due to new attractive long-range forces. This leads to two main improvements in detection capabilities: (1) the large boost allows for detectable signatures of DM well below a GeV at large-volume neutrino detectors, such as DUNE, Super-K, Hyper-K, and JUNO, as possible DM detectors, and (2) the flux at the Earth’s surface is enhanced by a focusing effect. In addition, the model leads to a significant anisotropy in the signal with the DM flowing dominantly vertically at the Earth’s surface instead of the typical approximately isotropic DM signal. We develop the theory behind this model and also calculate realistic constraints using a detailed GENIE simulation of the signal inside detectors.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

2D Dilaton Gravity and the Weil–Petersson Volumes with Conical Defects

We derive the Weil-Petersson measure on the moduli space of hyperbolic surfaces with defects of arbitrary opening angles and use this to compute its volume. We conjecture a matrix integral computing the corresponding volumes and confirm agreement in simple cases. Here, we combine this mathematical result with the equivariant localization approach to Jackiw-Teitelboim gravity to justify a proposed exact solution of pure 2d dilaton gravity for a large class of dilaton potentials.

97 MATHEMATICS AND COMPUTING↗

Development of limited-view tomography for measurement of Spray G plume direction and liquid volume fraction

Abstract The method for direct injection of fuel in the cylinder of an IC engines is important to high-efficiency and low-emission performance. Optical spray diagnostics plays an important role in understanding plume movement and interaction for multi-hole injectors, and providing baseline understanding used for computational optimization of fuel delivery. Traditional planar or line-of-sight diagnostics fail to capture the liquid distribution because of optical thickness concerns. This work proposes a high-speed (67 kHz) extinction imaging technique at various injector rotations coupled to computed tomography (CT) for time-resolved reconstruction of liquid volume fraction in three dimensions. The number of views selected and processing were based on synthetic (modeled) liquid volume fraction data where extinction and CT adequately reconstructed each plume. The exercise showed that for an 8-hole, symmetric-design injector (ECN Spray G), only three different views are enough to reproduce the direction of each plume, and particularly the mean plume direction. Therefore, the number of views was minimized for experiments to save expense. Measurements applying this limited-view technique confirm plume–plume variations also detected with mechanical patternation, while providing better spatial and temporal resolution than achieved previously. Uncertainties due to the limited view within pressurized spray chambers, the droplet size, and optically thick regions are discussed. Graphic abstract

42 ENGINEERING↗

Few-Body Bound States and Resonances in Finite Volume

Since the pioneering work of Lüscher in the 1980s it is well known that considering quantum systems in finite volume, specifically, finite periodic boxes, can be used as a powerful computational tool to extract physical observables. While this formalism has been worked out in great detail in the two-body sector, much effort is currently being invested into deriving analogous relations for systems with more constituents. This work is relevant not only for nuclear physics, where lattice methods are now able to calculate few- and many-nucleon states, but also for other fields such as simulations of cold atoms. This article discusses recent progress regarding the extraction of few-body bound-state and resonance properties from finite-volume calculations of systems with an arbitrary number of constituents.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Long-term effects of cycle time and volume exchange ratio on poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production from food waste digestate by Haloferax mediterranei cultivated in sequencing batch reactors for 450 days

Food waste digestate was fed into a sequencing batch reactor (SBR) for Haloferax mediterranei (HM) to produce poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV). This SBR was operated uninterruptedly for 450 days to test its stability, during which the cycle time and volume exchange ratio were varied to understand their impacts on the PHBV fermentation performance under ranged organic loading rates (OLR). Results showed that 1) PHBV productivity was proportional to OLR of food waste digestate; 2) substrate and product inhibitions were two limiting factors constraining substrate utilization and PHBV yields; 3) PHBV titer was dependent on the hydraulic retention time of the SBR while a volume exchange ratio lower than 0.5 is unfavorable due to the product inhibitor accumulation. Furthermore, this study for the first time demonstrated that the long-term stability of food waste-fed PHBV production by HM and revealed that inhibition effects could be barriers in SBR limiting the full-scale application of the technology.

09 BIOMASS FUELS↗

Early age volume changes in metakaolin geopolymers: Insights from molecular simulations and experiments

The early age volume changes occurring during the geopolymerisation reaction are not sufficiently understood yet, due to shortage of experimental data and theoretical models. This work presents new results on chemical and autogenous deformation of sodium-activated geopolymers from metakaolin, focussing on the first 72 h of reaction. The results show that the geopolymers undergo early-age chemical expansion, not shrinkage. A model is proposed to explain the experimental result, leveraging recent advances from molecular simulations. The model predicts how the extent of chemical expansion is controlled by confined water in the molecular structure of the geopolymer. However, despite this underlying chemical expansion, geopolymer samples undergo autogenous shrinkage at the macroscale, which excludes self-desiccation as the origin of autogenous deformation. A better insight is gained by monitoring the kinetics of geopolymerisation using isothermal and differential calorimetry. Two kinetic regimes are identified, with apparent activation energies of approximately 90 kJ/mol and 70 kJ/mol. This suggests that two microscopic mechanisms concur to determine the early-age volume changes of geopolymer pastes.

36 MATERIALS SCIENCE↗

Prospective Phase 2 Study of Radiation Therapy Dose and Volume De-escalation for Elective Neck Treatment of Oropharyngeal and Laryngeal Cancer

The required elective nodal dose and volumes for head and neck intensity modulated radiation therapy have largely been extrapolated from conventional radiation therapy fields. In this prospective, dual-center, phase 2 study, we investigated the efficacy and tolerability of reduced elective nodal volume and dose in oropharyngeal and laryngeal squamous cell carcinoma.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Investigating the impact of micropore volume of aminosilica functionalized SBA-15 on catalytic activity for amine-catalyzed reactions

Mesoporous materials such as SBA-15 are used in many applications since the materials are robust and have tunable properties. Whereas these materials are thought to be ideal, the materials are complex with the common synthesis methods producing materials that contain micropores. This work will investigate the impact of micropores on catalytic activity of aminosilica materials. For comparison, materials are formed using a standard method that produces materials with micropores (REG-SBA-15) and using a modified method that produces materials with negligible micropore volume (NMP-SBA-15). After grafting the calcined support with an aminosilane (either (N-methyl amino propyl) trimethoxy silane (denoted as 2°Am) or (N,N-diethyl-3-amino propyl) trimethoxy silane (3°Am)), catalytic testing experiments reveal that NMP-SBA-15 functionalized materials are more active than REG-SBA-15 functionalized materials for a range of reactions. The reactions include (a) glucose isomerization where amines interacting with surface silanols limit catalytic activity and (b) aldol and Knoevenagel chemistry where amine-silanol interactions increase the reaction rate. For aldol chemistry, the observed difference in rate is further investigated using site quantification experiments. Interestingly, the results reveal that three types of sites exist for each material, including sites that are (1) highly active, (2) intermediate active, and (3) inactive. Additionally, NMR experiments indicate that amines immobilized on REG-SBA-15 supports are less mobile than amines on NMP-SBA-15. For REG-SBA-15, the materials are found to have aminosilanes that have limited mobility and the largest fraction of inactive sites, which suggests that the inactive catalytic sites are in the micropores. Overall, the design of highly active catalytic materials can be achieved using materials that have limited micropore volumes.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗