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DOE OSTI2026

BASIN-3D Data Integration for Selected ARM Data Field Campaign Report

The purpose of this data services request was to demonstrate integration of the Atmospheric Radiation Measurement (ARM) User Facility’s “met” datastreams with time series data from other earth science data sources using the BASIN-3D data synthesis software tool. BASIN-3D is an open-source Python library that enables researchers to integrate data across configured public and private data sources. It provides a common query language for researchers to request measurement locations and time series data based on specified locations, variables, time period, statistics, aggregation, and data quality. BASIN-3D acquires the data that match the query from each configured data source and translates the results into harmonized vocabularies, thus reducing researchers' data-wrangling effort. In addition, because the queries are executed on demand, researchers can easily regenerate their synthesized data sets as new data and/or data updates become available, eliminating one-off data products. BASIN-3D can output data using a variety of different data structures for end-user applications including Python pandas data frames and hdf5 output formats.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

The ARM Precipitation Best Estimate (PrecipBE) Value-Added Product Report

The U.S. Department of Energy Atmospheric Radiation Measurement (ARM) User Facility’s Precipitation Best-Estimate (PrecipBE) Value-Added Product integrates multiple precipitation datastreams, accounting for data quality and instrument limitations, to deliver comprehensive per-precipitation event properties alongside ancillary ARM data set data. PrecipBE bundles all valid surface rainfall samples into artificial intelligence (AI)-ready tabular and time-series formats, reporting bundle means and uncertainty ranges. This per-event structure provides an insightful and easy-to-use resource for researchers analyzing precipitation characteristics.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2026

SPARTAN and IMPROVE Comparison Experiment (SPICE) Interim Campaign Report

SPICE (the SPARTAN and IMPROVE Comparison Experiment) aims to obtain and quantify comparisons between aerosol PM 2.5 mass concentration measurements from the University of Oklahoma (OU) Surface Particulate Matter Network (SPARTAN) station and the U.S. Environmental Protection Agency (EPA) Interagency Monitoring of Protected Visual Environments (IMPROVE) station hosted by the U.S. Department of Energy Atmospheric Radiation Measurement (ARM) User Facility at ARM’s Southern Great Plains (SGP) observatory in Oklahoma. Aerosols—both natural and anthropogenic—affect human populations in multiple ways. Much of ARM’s research focuses on how aerosols influence weather and climate through their optical and radiative effects, as well as their impacts on clouds and precipitation. However, aerosols also pose direct risks to humans and other organisms through inhalation, with the severity of health impacts depending on particle size, chemical composition, and duration of exposure. The IMPROVE network was established by the U.S. EPA to monitor air quality, including visible clarity as well as total and chemically speciated aerosol mass concentrations. The ARM SGP site hosts the IMPROVE SOGP station. Separately, the SPARTAN network operates a globally distributed set of stations similar to IMPROVE but with an emphasis on remote deployment and semi-autonomous operation for use beyond the borders of the United States (IMPROVE only operates within the U.S.). The University of Oklahoma operates a SPARTAN station. To establish confidence in the OU SPARTAN instrumentation and measurement protocol relative to the EPA-certified IMPROVE station, the OU SPARTAN station is currently deployed at SGP in close proximity to the IMPROVE SOGP station. The SPICE campaign was envisioned as a contiguous calendar-year effort for 2025 to capture seasonal variation in mass loading as well as composition. However, independent of the SPICE campaign, the SPARTAN network adopted a new filter construction part-way through the year, interrupting our contiguous data set. Thus, to obtain a contiguous data set with a uniform consistent configuration, SPICE desires an extension through 2026.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Improved Mobilome Delineation in Fragmented Genomes

The mobilome of a microbe, i.e., its set of mobile elements, has major effects on its ecology, and is important to delineate properly in each genome. This becomes more challenging for incomplete genomes, and even more so for metagenome-assembled genomes (MAGs), where misbinning of scaffolds and other losses can occur. Genomic islands (GIs), which integrate into the host chromosome, are a major component of the mobilome. Our GI-detection software TIGER, unique in its precise mapping of GI termini, was applied to 74,561 genomes from 2,473 microbial species, each species containing at least one MAG and one isolate genome. A species-normalized deficit of ∼1.6 GIs/genome was measured for MAGs relative to isolates. To test whether this undercount was due to the higher fragmentation of MAG genomes, TIGER was updated to enable detection of split GIs whose termini are on separate scaffolds or that wrap around the origin of a circular replicon. This doubled GI yields, and the new split GIs matched the quality of single-scaffold GIs, except that highly fragmented GIs may lack central portions. Cross-scaffold search is an important upgrade to GI detection as fragmented genomes increasingly dominate public databases. TIGER2 better captures MAG microdiversity, recovering niche-defining GIs and supporting microbiome research aims such as virus-host linking and ecological assessment.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Comparison of Machine Learning-Based Predictive Models of the Nutrient Loads Delivered from the Mississippi/Atchafalaya River Basin to the Gulf of Mexico

Predicting nutrient loads is essential to understanding and managing one of the environmental issues faced by the northern Gulf of Mexico hypoxic zone, which poses a severe threat to the Gulf’s healthy ecosystem and economy. The development of hypoxia in the Gulf of Mexico is strongly associated with the eutrophication process initiated by excessive nutrient loads. Due to the complexities in the excessive nutrient loads to the Gulf of Mexico, it is challenging to understand and predict the underlying temporal variation of nutrient loads. The study was aimed at identifying an optimal predictive machine learning model to capture and predict nonlinear behavior of the nutrient loads delivered from the Mississippi/Atchafalaya River Basin (MARB) to the Gulf of Mexico. For this purpose, monthly nutrient loads (N and P) in tons were collected from US Geological Survey (USGS) monitoring station 07373420 from 1980 to 2020. Machine learning models—including autoregressive integrated moving average (ARIMA), gaussian process regression (GPR), single-layer multilayer perceptron (MLP), and a long short-term memory (LSTM) with the single hidden layer—were developed to predict the monthly nutrient loads, and model performances were evaluated by standard assessment metrics—Root Mean Square Error (RMSE) and Correlation Coefficient (R). The residuals of predictive models were examined by the Durbin–Watson statistic. The results showed that MLP and LSTM persistently achieved better accuracy in predicting monthly TN and TP loads compared to GPR and ARIMA. In addition, GPR models achieved slightly better test RMSE score than ARIMA models while their correlation coefficients are much lower than ARIMA models. Moreover, MLP performed slightly better than LSTM in predicting monthly TP loads while LSTM slightly outperformed for TN loads. Furthermore, it was found that the optimizer and number of inputs didn’t show effects on the LSTM performance while they exhibited impacts on MLP outcomes. This study explores the capability of machine learning models to accurately predict nonlinearly fluctuating nutrient loads delivered to the Gulf of Mexico. Further efforts focus on improving the accuracy of forecasting using hybrid models which combine several machine learning models with superior predictive performance for nutrient fluxes throughout the MARB.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

PyFLEXTRKR: a flexible feature tracking Python software for convective cloud analysis

Abstract. This paper describes the new open-source framework PyFLEXTRKR (Python FLEXible object TRacKeR), a flexible atmospheric feature tracking software package with specific capabilities to track convective clouds from a variety of observations and model simulations. This software can track any atmospheric 2D objects and handle merging and splitting explicitly. The package has a collection of multi-object identification algorithms, scalable parallelization options, and has been optimized for large datasets including global high-resolution data. We demonstrate applications of PyFLEXTRKR on tracking individual deep convective cells and mesoscale convective systems from observations and model simulations ranging from large-eddy resolving (∼100s m) to mesoscale (∼10s km) resolutions. Visualization, post-processing, and statistical analysis tools are included in the package. New Lagrangian analyses of convective clouds produced by PyFLEXTRKR applicable to a wide range of datasets and scales facilitate advanced model evaluation and development efforts as well as scientific discovery.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Holocene thinning of Darwin and Hatherton glaciers, Antarctica, and implications for grounding-line retreat in the Ross Sea

Chronologies of glacier deposits in the Transantarctic Mountains provide important constraints on grounding-line retreat during the last deglaciation in the Ross Sea. However, between Beardmore Glacier and Ross Island – a distance of some 600 km – the existing chronologies are generally sparse and far from the modern grounding line, leaving the past dynamics of this vast region largely unconstrained. We present exposure ages of glacial deposits at three locations alongside the Darwin–Hatherton Glacier System – including within 10 km of the modern grounding line – that record several hundred meters of Late Pleistocene to Early Holocene thickening relative to present. As the ice sheet grounding line in the Ross Sea retreated, Hatherton Glacier thinned steadily from about 9 until about 3 ka. Our data are equivocal about the maximum thickness and Mid-Holocene to Early Holocene history at the mouth of Darwin Glacier, allowing for two conflicting deglaciation scenarios: (1) ~500 m of thinning from 9 to 3 ka, similar to Hatherton Glacier, or (2) ~950 m of thinning, with a rapid pulse of ~600 m thinning at around 5 ka. We test these two scenarios using a 1.5-dimensional flowband model, forced by ice thickness changes at the mouth of Darwin Glacier and evaluated by fit to the chronology of deposits at Hatherton Glacier. The constraints from Hatherton Glacier are consistent with the interpretation that the mouth of Darwin Glacier thinned steadily by ~500 m from 9 to 3 ka. Rapid pulses of thinning at the mouth of Darwin Glacier are ruled out by the data at Hatherton Glacier. This contrasts with some of the available records from the mouths of other outlet glaciers in the Transantarctic Mountains, many of which thinned by hundreds of meters over roughly a 1000-year period in the Early Holocene. The deglaciation histories of Darwin and Hatherton glaciers are best matched by a steady decrease in catchment area through the Holocene, suggesting that Byrd and/or Mulock glaciers may have captured roughly half of the catchment area of Darwin and Hatherton glaciers during the last deglaciation. An ensemble of three-dimensional ice sheet model simulations suggest that Darwin and Hatherton glaciers are strongly buttressed by convergent flow with ice from neighboring Byrd and Mulock glaciers, and by lateral drag past Minna Bluff, which could have led to a pattern of retreat distinct from other glaciers throughout the Transantarctic Mountains.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Quantifying wind plant blockage under stable atmospheric conditions

Wind plant blockage reduces the wind velocity upstream undermining turbine performance for the first row of the plant. We assess how atmospheric stability modifies the induction zone of a wind plant in flat terrain. We also explore different approaches to quantifying the magnitude and extent of the induction zone from field-like observations. To investigate the influence from atmospheric stability, we compare simulations of two stable boundary layers using the Weather Research and Forecasting model in large-eddy simulation mode, representing wind turbines using the generalized actuator disk approach. We find a faster cooling rate at the surface, which produces a stronger stably stratified boundary layer, amplifies the induction zone of both an isolated turbine and of a large wind plant. A statistical analysis on the hub-height wind speed field shows wind slowdowns only extend far upstream (up to 15D) of a wind plant in strong stable boundary layers. To evaluate different ways of measuring wind plant blockage from field-like observations, we consider various ways of estimating the freestream velocity upstream of the plant. Sampling a large area upstream is the most accurate approach to estimating the freestream conditions, and thus of measuring the blockage effect. Also, the choice of sampling method may induce errors of the same order as the velocity deficit in the induction zone.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Meso- to microscale modeling of atmospheric stability effects on wind turbine wake behavior in complex terrain

Abstract. Terrain-induced flow phenomena modulate wind turbine performance and wake behavior in ways that are not adequately accounted for in typical wind turbine wake and wind plant design models. In this work, we simulate flow over two parallel ridges with a wind turbine on one of the ridges, focusing on conditions observed during the Perdigão field campaign in 2017. Two case studies are selected to be representative of typical flow conditions at the site, including the effects of atmospheric stability: a stable case where a mountain wave occurs (as in ∼ 50 % of the nights observed) and a convective case where a recirculation zone forms in the lee of the ridge with the turbine (as occurred over 50 % of the time with upstream winds normal to the ridgeline). We use the Weather Research and Forecasting Model (WRF), dynamically downscaled from the mesoscale (6.75 km resolution) to microscale large-eddy simulation (LES) at 10 m resolution, where a generalized actuator disk (GAD) wind turbine parameterization is used to simulate turbine wakes. We compare the WRF–LES–GAD model results to data from meteorological towers, lidars, and a tethered lifting system, showing good qualitative and quantitative agreement for both case studies. Significantly, the wind turbine wake shows different amounts of vertical deflection from the terrain and persistence downstream in the two stability regimes. In the stable case, the wake follows the terrain along with the mountain wave and deflects downwards by nearly 100 m below hub height at four rotor diameters downstream. In the convective case, the wake deflects above the recirculation zone over 40 m above hub height at the same downstream distance. Overall, the WRF–LES–GAD model is able to capture the observed behavior of the wind turbine wakes, demonstrating the model's ability to represent wakes over complex terrain for two distinct and representative atmospheric stability classes, and, potentially, to improve wind turbine siting and operation in hilly landscapes.

17 WIND ENERGY↗

DOE OSTI2023

Investigating the physical mechanisms that modify wind plant blockage in stable boundary layers

Abstract. Wind plants slow down the approaching wind, a phenomenon known as blockage. Wind plant blockage undermines turbine performance for front-row turbines and potentially for turbines deeper into the array. We use large-eddy simulations to characterize blockage upstream of a finite-size wind plant in flat terrain for different atmospheric stability conditions and investigate the physical mechanisms modifying the flow upstream of the turbines. To examine the influence of atmospheric stability, we compare simulations of two stably stratified boundary layers using the Weather Research and Forecasting model in large-eddy simulation mode, representing wind turbines using the generalized actuator disk approach. For a wind plant, a faster cooling rate at the surface, which produces stronger stably stratified flow in the boundary layer, amplifies blockage. As a novelty, we investigate the physical mechanisms amplifying blockage by evaluating the different terms in the momentum conservation equation within the turbine rotor layer. The velocity deceleration upstream of a wind plant is caused by an adverse pressure gradient and momentum advection out of the turbine rotor layer. The cumulative deceleration of the flow upstream of the front-row turbines instigates vertical motions. The horizontal flow is diverted vertically, reducing momentum availability in the turbine rotor layer. Although the adverse pressure gradient upstream of the wind plant remains unchanged with atmospheric stability, vertical advection of horizontal momentum is amplified in the more strongly stable boundary layer, mainly by larger shear of the horizontal velocity, thus increasing the blockage effect.

17 WIND ENERGY↗

DOE OSTI2023