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DOE OSTI2025

Visolis Microbial Chemical Intermediate Library Screening (CRADA Final Report)

Visolis is developing a commercial process for the bioproduction of a chemical intermediate, towards the derivative production of a portfolio of bio-based chemicals with large application potential, from drop-in commodity chemicals, to innovative specialty chemical offerings, to materials for multiple end markets and industries, which will ultimately benefit consumers and the public. Visolis already has several variants of a microbe that produce the chemical intermediate at distinct levels (i.e. high, medium, and low). They are currently pursuing transcriptomics analysis for some of these strains, towards a better understanding of the biology behind what makes certain strains perform better than others. There exist genome-scale library approaches for the microbe that could be used to screen gene disruption, overexpression, or repression candidates for perturbations to the production of the chemical intermediate. These approaches often reveal opportunities for further production improvement that are not otherwise accessible using hypothesis-driven metabolic engineering approaches. However, Visolis, while it could generate or procure such genome-scale libraries, does not have the automated strain engineering workflows required to screen thousands of variants, obtaining a production phenotype and a genotype for each. The purpose of this collaboration is to use LBNL and SNL capabilities to enable Visolis to effectively screen thousands of genome-scale library strain variants for phenotype/genotype relationships that will complement Visolis’ transcriptomic investigations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2022

Transient Data Library of Solar Grid Integrated Distributed System

This submission contains an open-source library of transient events in distributed system with high solar PV. The library includes the collected data, related documents and scripts for loading the data. The data library is built for transient event detection and machine learning based analysis algorithm development. The data was collected via both field test and software simulation. The units for the data are included in the data file headers for each data series. A text editor or spreadsheet software, such as Excel, and Matlab is required to view the data.

algorithms↗

DOE OSTI2021

The APOGEE Library of Infrared SSP Templates (A-LIST): High-resolution Simple Stellar Population Spectral Models in the H Band

Integrated light spectroscopy from galaxies can be used to study the stellar populations that cannot be resolved into individual stars. This analysis relies on stellar population synthesis (SPS) techniques to study the formation history and structure of galaxies. However, the spectral templates available for SPS are limited, especially in the near-infrared (near-IR). We present A-LIST (APOGEE Library of Infrared SSP Templates), a new set of high-resolution, near-IR SSP spectral templates spanning a wide range of ages (2–12 Gyr), metallicities ( − 2.2 < [M/H] < + 0.4) and α abundances ( − 0.2 < [α/M] < + 0.4). This set of SSP templates is the highest resolution (R ∼ 22, 500) available in the near-IR, and the first such based on an empirical stellar library. Our models are generated using spectra of ∼300,000 stars spread across the Milky Way, with a wide range of metallicities and abundances, from the APOGEE survey. We show that our model spectra provide accurate fits to M31 globular cluster spectra taken with APOGEE, with best-fit metallicities agreeing with those of previous estimates to within ∼0.1 dex. We also compare these model spectra to lower-resolution E-MILES models and demonstrate that we recover the ages of these models to within ∼1.5 Gyr. This library is available in https://github.com/aishashok/ALIST-library.

47 OTHER INSTRUMENTATION↗

DOE OSTI2022

SDSS-IV MaStar: Data-driven Parameter Derivation for the MaStar Stellar Library

The Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) Stellar Library (MaStar) is a large collection of high-quality empirical stellar spectra designed to cover all spectral types and ideal for use in the stellar population analysis of galaxies observed in the MaNGA survey. The library contains 59,266 spectra of 24,130 unique stars with spectral resolution R ~ 1800 and covering a wavelength range of 3622–10,354 Å. In this work, we derive five physical parameters for each spectrum in the library: effective temperature (T eff ), surface gravity ($\mathrm{log} g$), metallicity ([Fe/H]), microturbulent velocity ($\mathrm{log}({v}_{\mathrm{micro}})$), and alpha-element abundance ([α/Fe]). These parameters are derived with a flexible data-driven algorithm that uses a neural network model. We train a neural network using the subset of 1675 MaStar targets that have also been observed in the Apache Point Observatory Galactic Evolution Experiment (APOGEE), adopting the independently-derived APOGEE Stellar Parameter and Chemical Abundance Pipeline parameters for this reference set. For the regions of parameter space not well represented by the APOGEE training set (7000 ≤ T ≤ 30,000 K), we supplement with theoretical model spectra. We present our derived parameters along with an analysis of the uncertainties and comparisons to other analyses from the literature.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2022

CoSHA: Code for Stellar Properties Heuristic Assignment—for the MaStar Stellar Library

We introduce CoSHA: a Code for Stellar properties Heuristic Assignment. In order to estimate the stellar properties, CoSHA implements a Gradient Tree Boosting algorithm to label each star across the parameter space (T eff , $\mathrm{log}g$, [Fe/H], and [α/Fe]). We use CoSHA to estimate the stellar atmospheric parameters of 22,000 unique stars in the MaNGA Stellar Library (MaStar). To quantify the reliability of our approach, we run internal tests, using both the Göttingen Stellar Library (a theoretical library) and the first data release of MaStar, and external tests, by comparing the resulting distributions in the parameter space with the APOGEE estimates of the same properties. In summary, our parameter estimates span the ranges T eff = [2900, 12,000] K, $\mathrm{log}g=[-0.5,5.6]$, [Fe/H] = [-3.74, 0.81], and αM = [-0.22, 1.17]. We report internal (external) uncertainties of the properties of ${\sigma }_{{T}_{\mathrm{eff}}}\sim 43(240)$ K, ${\sigma }_{\mathrm{log}g}\sim 0.2(0.4)$, σ [Fe/H] ~ 0.16(0.24), and σ [α/Fe] ~ 0.09(0.08). These uncertainties are comparable to those of other methods with similar objectives. Despite the fact that CoSHA is not aware of the spatial distributions of these physical properties in the Milky Way, we are able to recover the main trends known in the literature. The catalog of physical properties for MaStar can be accessed online.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2023

Developing capacitated p-median location-allocation model in the spopt library to allow UCL student teacher placements using public transport

Location-allocation is a key tool within the GIS and network analysis toolbox. In this paper we discuss the real world application of a location-allocation case study (approx 800 students, 500 schools) from UCL using public transport. The use of public transportation is key for this case study, as many location-allocation approaches only make use of drive-time or walking-time distances, but the location of UCL in Greater London, UK makes the inclusion of public transport vital for this case study. The location-allocation is implemented as a capacitated p-median location-allocation model, using the spopt library, part of the Python Spatial Analysis Library (PySAL). The capacitated variation of the p-median location-allocation problem is a new addition to the spopt library, which this work will present. The results from the initial version of the capacitated p-median location-allocation problem has shown a marked improvement on public transport travel time, with public transport travel time reduced by 891 minutes overall for an initial sample of 93 students (9.58 minutes per student). Results will be presented below and plans for further improvement shared.

Bearman, Nick↗

NASA NTRS1977

An automated library financial management system

A computerized library acquisition system developed for control of informational materials acquired at NASA Ames Research Center is described. The system monitors the acquisition of both library and individual researchers' orders and supplies detailed financial, statistical, and bibliographical information. Applicability for other libraries and the future availability of the program is discussed.

Dueker, S.↗

NASA NTRS1978

ODIN system technology module library, 1972 - 1973

ODIN/RLV is a digital computing system for the synthesis and optimization of reusable launch vehicle preliminary designs. The system consists of a library of technology modules in the form of independent computer programs and an executive program, ODINEX, which operates on the technology modules. The technology module library contains programs for estimating all major military flight vehicle system characteristics, for example, geometry, aerodynamics, economics, propulsion, inertia and volumetric properties, trajectories and missions, steady state aeroelasticity and flutter, and stability and control. A general system optimization module, a computer graphics module, and a program precompiler are available as user aids in the ODIN/RLV program technology module library.

Hague, D. S.↗

NASA NTRS1985

Library Information-Processing System

System works with Library of Congress MARC II format. System composed of subsystems that provide wide range of library informationprocessing capabilities. Format is American National Standards Institute (ANSI) format for machine-readable bibliographic data. Adaptable to any medium-to-large library.

Source record↗

NASA NTRS1988

Input/Output Subroutine Library Program

Efficient, easy-to-use program moved easily to different computers. Purpose of NAVIO, Input/Output Subroutine Library, provides input/output package of software for FORTRAN programs that is portable, efficient, and easy to use. Implemented as hierarchy of libraries. At bottom is very small library containing only non-portable routines called "I/O Kernel." Design makes NAVIO easy to move from one computer to another, by simply changing kernel. NAVIO appropriate for software system of almost any size wherein different programs communicate through files.

Collier, James B.↗

NASA NTRS1990

Hypercluster parallel processing library user's manual

This User's Manual describes the Hypercluster Parallel Processing Library, composed of FORTRAN-callable subroutines which enable a FORTRAN programmer to manipulate and transfer information throughout the Hypercluster at NASA Lewis Research Center. Each subroutine and its parameters are described in detail. A simple heat flow application using Laplace's equation is included to demonstrate the use of some of the library's subroutines. The manual can be used initially as an introduction to the parallel features provided by the library. Thereafter it can be used as a reference when programming an application.

Quealy, Angela↗

NASA NTRS1991

NASA/DOD Aerospace Knowledge Diffusion Research Project. Report 10: Summary report to phase 3 academic library respondents including frequency distributions

Phase 3 of a 4 part study was undertaken to study the use of scientific and technical information (STI) in the academic aerospace community. Phase 3 of this project used three questionnaires that were sent to three groups (i.e., faculty, librarians, and students) in the academic aerospace community. Specific attention was paid to the types of STI used and the methods in which academic users acquire STI. The responses of the academic libraries are focussed on herein. Demographic information on academic aerospace libraries is provided. Data regarding NASA interaction with academic aerospace libraries is also included, as is the survey instrument.

Pinelli, Thomas E.↗

NASA NTRS1992

Spectral synthesis in the ultraviolet. IV - A library of mean stellar groups

A library of mean UV stellar energy distributions is derived from IUE spectrophotometry of 218 stars. The spectra cover 1230-3200 A with a spectral resolution of about 6 A. They have been corrected for interstellar extinction and converted to a common flux and wavelength scale. Individual stars were combined into standard groups according to their continuum colors, observed UV spectral morphology, MK luminosity class, and metal abundance. The library consists of 56 groups: 21 dwarf(V), 8 subgiant(IV), 16 giant(III), and supergiant(I + II) groups, covering O3-M4 spectral types. A metal-poor sequence is included, containing four dwarf and two giant groups, as is a metal-enhanced sequence with a single dwarf, subgiant, and giant group. Spectral indices characterizing the continuum and several strong absorption features are examined as temperature, luminosity, and abundance diagnostics. The library is intended to serve as a basis for interpreting the composite UV spectra of a wide variety of stellar systems, e.g., elliptical galaxies, starburst systems, and high-redshift galaxies.

Fanelli, Michael N.↗

NASA NTRS1992

Technology for libraries and information centers: A seminar in Greece, Portugal, and Turkey

Information technologies are evolving at a rapid pace in today's world. But the electronic technologies needed to transform today's libraries and information centers into electronic 'libraries without walls', where an end-user has instantaneous access to all the information needed from a desktop workstation, have not yet arrived. Even so, there are many technologies available today that can be applied in the library/information center environment to yield increased productivity. However, not all technologies are right for or successful in every environment. Mission, budget, infrastructure, client profiles, and staff skills are a few of the 'environmental' issues that must be considered when selecting and introducing new technologies into a particular information center. Key technologies used in libraries today are reviewed; it can be used as background for targeting technologies that could be successfully implemented in your own environment to further service goals. Before focusing on a selection of technologies, you must first focus on the strategic goal of your organization. The same technology is not right for every library/information center. An overview of technologies that are readily available and can be applied today is presented.

Cotter, Gladys A.↗

NASA NTRS1993

Advanced Transport Operating System (ATOPS) utility library software description

The individual software processes used in the flight computers on-board the Advanced Transport Operating System (ATOPS) aircraft have many common functional elements. A library of commonly used software modules was created for general uses among the processes. The library includes modules for mathematical computations, data formatting, system database interfacing, and condition handling. The modules available in the library and their associated calling requirements are described.

Clinedinst, Winston C.↗

NASA NTRS1994

Application of new technologies in the virtual library: Seminars in Turkey, Portugal, and Spain

This paper focuses on the technologies that are available today to support the concept of a virtual library. The concept of a 'virtual library' or a 'library without walls' is meant to convey the idea that information in any format should be available to the end-user from the desktop as if it were located on the local workstation. Discussed here are the background, trends, technology enablers, end-user requirements, and the NASA Access Mechanism (NAM) system, one example of how it is possible to apply existing technologies to the client server architecture to logically centralize geographically distributed applications and information.

Hunter, Judy F.↗

NASA NTRS1992

The IDL astronomy user's library

IDL (Interactive Data Language) is a commercial programming, plotting, and image display language, which is widely used in astronomy. The IDL Astronomy User's Library is a central repository of over 400 astronomy-related IDL procedures accessible via anonymous FTP. The author will overview the use of IDL within the astronomical community and discuss recent enhancements at the IDL astronomy library. These enhancements include a fairly complete I/O package for FITS images and tables, an image deconvolution package and an image mosaic package, and access to IDL Open Windows/Motif widgets interface. The IDL Astronomy Library is funded by NASA through the Astrophysics Software and Research Aids Program.

Landsman, W. B.↗

NASA NTRS1993

A petabyte size electronic library using the N-Gram memory engine

A model library containing petabytes of data is proposed by Triada, Ltd., Ann Arbor, Michigan. The library uses the newly patented N-Gram Memory Engine (Neurex), for storage, compression, and retrieval. Neurex splits data into two parts: a hierarchical network of associative memories that store 'information' from data and a permutation operator that preserves sequence. Neurex is expected to offer four advantages in mass storage systems. Neurex representations are dense, fully reversible, hence less expensive to store. Neurex becomes exponentially more stable with increasing data flow; thus its contents and the inverting algorithm may be mass produced for low cost distribution. Only a small permutation operator would be recalled from the library to recover data. Neurex may be enhanced to recall patterns using a partial pattern. Neurex nodes are measures of their pattern. Researchers might use nodes in statistical models to avoid costly sorting and counting procedures. Neurex subsumes a theory of learning and memory that the author believes extends information theory. Its first axiom is a symmetry principle: learning creates memory and memory evidences learning. The theory treats an information store that evolves from a null state to stationarity. A Neurex extracts information data without a priori knowledge; i.e., unlike neural networks, neither feedback nor training is required. The model consists of an energetically conservative field of uniformly distributed events with variable spatial and temporal scale, and an observer walking randomly through this field. A bank of band limited transducers (an 'eye'), each transducer in a bank being tuned to a sub-band, outputs signals upon registering events. Output signals are 'observed' by another transducer bank (a mid-brain), except the band limit of the second bank is narrower than the band limit of the first bank. The banks are arrayed as n 'levels' or 'time domains, td.' The banks are the hierarchical network (a cortex) and transducers are (associative) memories. A model Neurex was built and studied. Data were 50 MB to 10 GB samples of text, data base, and images: black/white, grey scale, and high resolution in several spectral bands. Memories at td, S(m(sub td)), were plotted against outputs of memories at td-1. S(m(sub td)) was Boltzman distributed, and memory frequencies exhibited self-organized criticality (SOC); i.e., 'l/f(sup beta)' after long exposures to data. Whereas output signals from level n may be encoded with B(sub output) = O(-log(2)f(sup beta)) bits, and input data encoded with B(sub input) = O((S(td)/S(td-1))(sup n)), B(sup output)/B(sub input) is much less than 1 always, the Neurex determines a canonical code for data and it is a lossless data compressor. Further tests are underway to confirm these results with more data types and larger samples.

Bugajski, Joseph M.↗