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At least 181 records · Page 10
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

PlasmidMaker: a Versatile, Automated, and High Throughput End-to-End Platform for Plasmid Construction

Plasmids are used extensively in basic and applied biology. However, design and construction of plasmids, specifically the ones carrying complex genetic information, remains one of the most time-consuming, labor-intensive, and rate-limiting steps in performing sophisticated biological experiments. Here, we report the development of a versatile, robust, automated end-to-end platform named PlasmidMaker that allows error-free construction of plasmids with virtually any sequences in a high-throughput manner. This platform consists of a most versatile DNA assembly method using Pyrococcus furiosus Argonaute ( Pf Ago)-based artificial restriction enzymes, a user-friendly frontend for plasmid design, and a backend that streamlines the workflow and integration with a robotic system. As a proof of concept, we used this platform to generate ~100 plasmids from six different species ranging from 5 to 18 kb in size from up to 11 DNA fragments within 3 days. PlasmidMaker should greatly expand the potential of synthetic biology.

Enghiad, Behnam↗
NASA NTRS1971

Dynamic compression of enstatite

Shock wave data for Bamle enstatite in 60-480 kb range, considering Hugoniot elastic limit and phase transition produced shock front

Ahrens, T. J.↗
NASA NTRS1972

Moments of inertia of the lunar globe, and their bearing on chemical differentiation of its outer layers.

It is pointed out that the observed moments of inertia of the moon, disclosed by its librations, are influenced mainly by the distribution of mass in the outer zone in which the lithostatic pressure is less than 10 kb (i.e., in the outer shell not more than 200 km deep); a conspicuous departure of such moments from those expected in hydrostatic equilibrium disclosed that these layers could never have been fluid. In the same way, the actual shape of the lunar surface cannot represent a solidified surface of a fluid, petrified at any distance from the earth. The shape of the moon and differences of its moments of inertia must reflect the way in which the initial process of cold accretion fell short of producing a globe with strictly spherically-symmetrical stratification of material. Such melting or lava flows as may have occurred at the moon's surface from time to time must have remained localized, and without much effect on the dynamical properties of the moon.

Kopal, Z.↗
NASA NTRS1972

Effect of pore pressure on the velocity of compressional waves in low-porosity rocks.

The velocity V sub p of compressional waves has been measured in rock samples of low porosity to confining pressures P sub c of 2 kb for a number of different constant pore pressures P sub p. An effective pressure defined by P sub e = P sub c-nP sub p, n less than or equal to 1, is found to be the determining factor in the behavior of V sub p rather than an effective pressure defined simply by the differential pressure Delta P = P sub c-P sub p. As pore pressure increases at constant effective pressure, the value of n increases and approaches 1, but as effective pressure increases at constant pore pressure, the value of n decreases. These observations are consistent with Biot's theory of the propagation of elastic waves in a fluid-saturated porous solid.

Todd, T.↗
NASA NTRS1973

Plasma fluctuations in a Kaufman thruster

Measurements of the RMS magnitude, spectra, and cross correlations for the fluctuations in the beam, discharge, and neutralizer keeper currents are presented for a 30 cm diameter dished grid ion thruster for a range of magnetic baffle currents. The ratio of RMS to mean ion beam current varied from 0.04 to 0.23. The spectra of the amplitudes of the beam and discharge current fluctuations were taken up to 9 MHz and show that the predominant amplitudes occur at frequencies of 10 kHz or below. The falloff with increasing frequency is rapid. Frequencies above 100 kHz the spectral levels are 45 kb or more below the maximum peak amplitudes. The cross correlations revealed the ion beam fluctuations to have large radial and axial scales.

Serafini, J. S.↗
NASA NTRS1972

Experimental petrology and origin of Fra Mauro rocks and soil.

Results of melting experiments over the pressure range from 0 to 20 kb on Apollo 14 igneous rocks 14310 and 14072, and on comprehensive fines 14259. It is found that low-pressure crystallization of rocks 14310 and 14072 proceeds as predicted from the textural relationships displayed by thin sections of these rocks. The mineralogy and textures of these rocks are the result of near-surface crystallization. The chemical compositions of these lunar samples all show special relationships to multiply saturated liquids in the system anorthite-forsterite-fayalite-silica at low pressure. Partial melting of a lunar crust consisting largely of plagioclase, low-calcium pyroxene, and olivine, followed by crystal fractionation at the lunar surface, is a satisfactory mechanism for the production of the igneous rocks and soil glasses sampled by Apollo 14. The KREEP component of other lunar soils, may have a similar origin.

Walker, D.↗
NASA NTRS1972

Elastic properties of Apollo 14 and 15 rocks.

Ultrasonic P- and S-wave velocities of lunar samples 14310,72 and 15418,43 and P-wave velocities of sample 15015,18 were measured at room temperature to 5 kb confining pressure. The velocities of both igneous and breccia samples increased sharply over this pressure range. At low confining pressures, the shape of velocity-pressure curves of rocks is determined by the distribution function of crack aspect ratios. We suggest that analogue studies on terrestrial rocks having a wide assortment of crack parameters may be used to infer the nature of cracks in lunar rocks.

Todd, T.↗
NASA NTRS1973

Elasticity of water-saturated rocks as a function of temperature and pressure.

Compressional and shear wave velocities of water-saturated rocks were measured as a function of both pressure and temperature near the melting point of ice to confining pressure of 2 kb. The pore pressure was kept at about 1 bar before the water froze. The presence of a liquid phase (rather than ice) in microcracks of about 0.3% porosity affected the compressional wave velocity by about 5% and the shear wave velocity by about 10%. The calculated effective bulk modulus of the rocks changes rapidly over a narrow range of temperature near the melting point of ice, but the effective shear modulus changes gradually over a wider range of temperature. This phenomenon, termed elastic anomaly, is attributed to the existence of liquid on the boundary between rock and ice due to local stresses and anomalous melting of ice under pressure.

Takeuchi, S.↗
NASA NTRS1974

Interior and its implications for the atmosphere

The bulk composition and interior structure of Titan required to explain the presence of a substantial methane atmosphere are shown to imply the presence of solid CH4 - 7H2O in Titan's primitive material. Consideration of the possible composition and structure of the present atmosphere shows plausible grounds for considering models with total atmospheric pressures ranging from approximately 20 mb up to approximately 1 kb. Expectations regarding the physical state of the surface and its chemical composition are strongly conditioned by the mass of atmosphere believed to be present. A surface of solid CH4, liquid CH4 solid, CH4 hydrate, H2O ice, aqueous NH3 solution, or even a non-surface of supercritical H2O-NH3-CH4 fluid could be rationalized.

Lewis, J. S.↗
NASA NTRS1973

Plasma fluctuations in a Kaufman thruster

Measurements of the RMS magnitude, spectra and cross-correlations for the fluctuations in the beam, discharge and neutralizer keeper currents are presented for a 30-cm diameter dished grid ion thrustor for a range of magnetic baffle currents and up to 2.0 amperes beam current. The ratio of RMS to mean ion beam current varied from 0.04 to 0.23. The spectra of the amplitudes of the beam and discharge current fluctuations were taken up to 9 MHz and show that the predominant amplitudes occur at frequencies of 10 kHz or below. The fall-off with increasing frequency is rapid. Frequencies above 100 kHz the spectral levels are 45 kb or more below the maximum peak amplitudes. The cross-correlations revealed the ion beam fluctuations to have large radial and axial scales which implied that the beam fluctuates as a whole or 'in-phase.' The cross-correlations of the beam and neutralizer keeper current fluctuations indicated the neutralizer contributions to the beam fluctuations to be small, but not negligible. The mode of operation of the thrustor (values of beam and magnetic baffle currents) was significant in determining the RMS magnitude and spectral shape of the beam fluctuations. The major oscillations were not found to be directly dependent on the power conditioner inverter frequencies.

Serafini, J. S.↗
NASA NTRS1973

Compressional and shear wave velocities in granular materials to 2.5 kilobars

The velocities of seismic compressional waves and, for the first time, shear wave velocities in silica sand, volcanic ash, and basalt powder were determined under hydrostatic confining pressures to 2.5 kb. Simultaneously, the porosity of these materials was obtained as a function of confining pressure. The presented results have important implications for the self-compaction hypothesis that has been postulated to explain the lunar near-surface seismic velocity variation.

Talwani, P.↗
NASA NTRS1973

Petrology of Apollo 16 lunar highland rocks

Four lunar highland rocks collected by the Apollo 16 astronauts were studied both optically and with the electron microscope. The compositions of cataclastic anorthosite 60025,132, feldspathic basalt 68416,78, spinel troctolite 62295,68, and recrystallized breccia 60315,62 are discussed and graphically presented. Melting experiments were carried out on troctolite 62295,49 and felspathic basalt 68416,21 at temperatures from 1,220 to 1375 C and at pressures from 5 to 12 kb. Hypotheses concerning their petrogenesis are presented.

Hodges, F. N.↗
NASA NTRS1973

Elastic wave velocities in anorthosite and anorthositic gabbros from Apollo 15 and 16 landing sites

Laboratory measurements of ultrasonic velocities in lunar samples 15065, 15555, 15415, 60015, and 61016 as well as in synthetic materials corresponding to compositions of anorthositic gabbros are presented as a function of hydrostatic pressure to about 7 kb. The author examined the seismic velocity distributions in the moon with reference to the variations to be expected in a homogeneous medium. The lunar mantle begins about 60 km, and the velocity of P waves in this area is about 7.7 km/sec. Variation of the seismic parameter with depth in the upper crust (about 20 km thick) is much too rapid to be explained by compression of a uniform material and the departure from expectation is so great that no reasonable adjustment of the material parameters can bring agreement; therefore, this author concludes that this result in this region of the moon is not due to self-compression but to textural gradients. In the lower crust (about 40 km thick), the region is shown to be relatively homogeneous, consisting probably of anorthositic rocks.

Chung, D. H.↗
NASA NTRS1973

Elastic wave velocities of Apollo 14, 15, and 16 rocks

Elastic wave velocities of two Apollo 14 rocks, 14053 and 14321, three Apollo 15 rocks, 15058, 15415, and 15545, and one Apollo 16 rock 60315 have been determined at pressures up to 10 kb. For sample 14321, the variation of the compressional wave velocities with temperature has been measured over the temperature range from 27 to 200 C. Overall elastic properties of these samples except sample 15415 are very similar to those of Apollo 11, 12, and 14 rocks and are concordant with Toksoz et al.'s (1972) interpretation that lunar upper crust is of basaltic composition. Temperature derivative of the P wave velocity for sample 14321 is a half to one order of magnitude larger than that for single crystalline minerals. This suggests that the seismic velocity in the lunar crust may be affected significantly by the temperature distribution.

Mizutani, H.↗
NASA NTRS1974

Implications of elastic wave velocities for Apollo 17 rock powders

Ultrasonic P- and S-wave velocities of lunar rock powders 172701, 172161, 170051, and 175081 were measured at room temperature and to 2.5 kb confining pressure. The results compare well with those of terrestrial volcanic ash and powdered basalt. P-wave velocity values up to pressures corresponding to a lunar depth of 1.4 km preclude cold compaction alone as an explanation for the observed seismic velocity structure at the Apollo 17 site. Application of small amounts of heat with simultaneous application of pressure causes rock powders to achieve equivalence of seismic velocities for competent rocks.

Talwani, P.↗
NASA NTRS1977

Shatter cones formed in large-scale experimental explosion craters

In 1968, a series of 0.5-ton and 100-ton TNT explosion experiments were conducted in granitic rock near Cedar City, Utah, as part of a basic research program on cratering and shock wave propagation. Of special interest was the formation of an important type of shock metamorphic feature, shatter cones. A description is presented of the first reported occurrence of shatter cones in high explosion trials. A background to shatter cone studies is presented and attention is given to the test program, geology and physical properties of the test medium, the observed cratering, and the formational pressures for shatter cones. The high explosion trials conducted demonstrate beyond any doubt, that shatter cones can be formed by shock wave processes during cratering and that average formational pressures in these crystalline rocks are in the 20-60 kb range.

Roddy, D. J.↗