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At least 181 records · Page 10

Beyond Ecosystem Modeling: A Roadmap to Community Cyberinfrastructure for Ecological Data-Model Integration

In an era of rapid global change, our ability to understand and predict Earth's natural systems is lagging behind our ability to monitor and measure changes in the biosphere. Bottlenecks to informing models with observations have reduced our capacity to fully exploit the growing volume and variety of available data. Here, we take a critical look at the information infrastructure that connects ecosystem modeling and measurement efforts, and propose a roadmap to community cyberinfrastructure development that can reduce the divisions between empirical research and modeling and accelerate the pace of discovery. A new era of data‐model integration requires investment in accessible, scalable, and transparent tools that integrate the expertise of the whole community, including both modelers and empiricists. This roadmap focuses on five key opportunities for community tools: the underlying foundations of community cyberinfrastructure; data ingest; calibration of models to data; model‐data benchmarking; and data assimilation and ecological forecasting. This community‐driven approach is a key to meeting the pressing needs of science and society in the 21st century.

Istem Fer

Adaptations of Endolithic Communities to Abrupt Environmental Changes in A Hyper-Arid Desert

The adaptation mechanisms of microbial communities to natural perturbations remain relatively unexplored, particularly in extreme environments. The extremophilic communities of halite (NaCl) nodules from the hyper-arid core of the Atacama Desert are self-sustained and represent a unique opportunity to study functional adaptations and community dynamics with changing environmental conditions. We transplanted halite nodules to different sites in the desert and investigated how their taxonomic, cellular, and biochemical changes correlated with water availability, using environmental data modeling and metagenomic analyses. Salt-in strategists, mainly represented by haloarchaea, significantly increased in relative abundance at sites characterized by extreme dryness, multiple wet/dry cycles, and colder conditions. The functional analysis of metagenome-assembled genomes (MAGs) revealed site-specific enrichments in archaeal MAGs encoding for the uptake of various compatible solutes and for glycerol utilization. These findings suggest that opportunistic salt-in strategists took over the halite communities at the driest sites. They most likely benefited from metabolites newly released in the environment by the death of microorganisms least adapted to the new conditions. The observed changes were consistent with the need to maximize cellular bioenergetics when confronted with lower water availability and higher salinity, providing valuable information on microbial community adaptations and resilience to climate change.

Atacama

Building access and community standards for opacity data at the onset of next-generation atmosphere observations

The characterization of a diverse set of exoplanet atmosphere observations, ranging from hot gas giants to small temperate rocky worlds, will be one of the legacies of upcoming facilities such as the James Webb Space Telescope (JWST). Our understanding and interpretation of such observations will hinge on our ability to link observations with atmospheric theoretical studies that critically rely on fundamental molecular and atomic opacities. Computing such opacities is a highly non-trivial and inaccessible process which requires several terabytes of available disk space, hours of CPU time per pressure-temperature combination, and requires users to carefully aggregate line lists data from various sources, which limits access and intercomparison of opacity data in the exoplanet community. Here we present MAESTRO (Molecules and Atoms in Exoplanet Science: Tools and Resources for Opacities) an opacity database that can be accessed by the community via a web interface and python API. MAESTRO was built with community input to create a version-controlled opacity database that is easily queryable, includes informative metadata to ensure reproducibility, and exports relevant citations for inclusion in publications. Scheduled for community release in 2022, MAESTRO will prove to be an invaluable community resource in the era of JWST and beyond.

Natasha Batalha

Localizing Earth Science: The NASA DEVELOP Model of Community Science & Engagement

NASA’s DEVELOP Program conducts rapid feasibility studies that apply Earth observations to address community priorities and needs and enable informed decision making. Part of NASA’s Applied Sciences’ Capacity Building Program, DEVELOP builds skills in both participants (students, recent graduates, and early/transitioning career professionals) who conduct projects on small teams, and partner organizations (state and local governments, federal agencies, non-profit and for-profit organizations, and international organizations) that work closely with DEVELOP to design the project. While only a subset of DEVELOP partner organizations are local municipalities or community-led non-profits, the DEVELOP model is an effective engagement tool and often used by NASA as an introduction for communities to engage in Earth science research and familiarization with satellite remote sensing. This presentation will highlight the DEVELOP model of co-production and community collaboration, lessons learned in partnering with local communities, and evaluation activities that look at the program’s reach and efforts.

Robert Cecil Byles

Sharks Associated With A Large Sand Shoal Complex: Community Insights From Longline and Acoustic Telemetry Surveys

Offshore sand shoals are a coveted sand source for coastal restoration projects and as sites for wind energy development. Shoals often support unique fish assemblages but their habitat value to sharks is largely unknown due to the high mobility of most species in the open ocean. This study pairs multi-year longline and acoustic telemetry surveys to reveal depth-related and seasonal patterns in a shark community associated with the largest sand shoal complex in east Florida, USA. Monthly longline sampling from 2012–2017 yielded 2,595 sharks from 16 species with Atlantic sharpnose (Rhizoprionodon terraenovae), blacknose (Carcharhinus acronotus), and blacktip (C. limbatus) sharks being the most abundant species. A contemporaneous acoustic telemetry array detected 567 sharks from 16 species (14 in common with longlines) tagged locally and by researchers elsewhere along the US East Coast and Bahamas. PERMANOVA modeling of both datasets indicate that the shark species assemblage differed more across seasons than water depth although both factors were important. Moreover, the shark assemblage detected at an active sand dredge site was similar to that at nearby undisturbed sites. Water temperature, water clarity, and distance from shore were habitat factors that most strongly correlated to community composition. Both sampling approaches documented similar single-species and community trends but longlines underestimated the shark nursery value of the region while telemetry-based community assessments are inherently biased by the number of species under active study. Overall, this study confirms that sharks can be an important component of sand shoal fish communities but suggests that deeper water immediately adjacent to shoals (as opposed to shallow shoal ridges) is more valuable to some species. Potential impacts to these nearby habitats should be considered when planning for sand extraction and offshore wind infrastructure.

Shark Management

Accounting for Herbaceous Communities in Process-Based Models Will Advance Our Understanding of “Grassy” Ecosystems

Grassland and other herbaceous communities cover significant portions of Earth's terrestrial surface and provide many critical services, such as carbon sequestration, wildlife habitat, and food production. Forecasts of global change impacts on these services will require predictive tools, such as process-based dynamic vegetation models. Yet, model representation of herbaceous communities and ecosystems lags substantially behind that of tree communities and forests. The limited representation of herbaceous communities within models arises from two important knowledge gaps: first, our empirical understanding of the principles governing herbaceous vegetation dynamics is either incomplete or does not provide mechanistic information necessary to drive herbaceous community processes with models; second, current model structure and parameterization of grass and other herbaceous plant functional types limits the ability of models to predict outcomes of competition and growth for herbaceous vegetation. In this review, we provide direction for addressing these gaps by: (1) presenting a brief history of how vegetation dynamics have been developed and incorporated into earth system models, (2) reporting on a model simulation activity to evaluate current model capability to represent herbaceous vegetation dynamics and ecosystem function, and (3) detailing several ecological properties and phenomena that should be a focus for both empiricists and modelers to improve representation of herbaceous vegetation in models. Together, empiricists and modelers can improve representation of herbaceous ecosystem processes within models. In so doing, we will greatly enhance our ability to forecast future states of the earth system, which is of high importance given the rapid rate of environmental change on our planet.

biogeochemistry

The NASA DEVELOP Model of Community Science & Engagement: Localizing Earth Science Information

The NASA DEVELOP Program conducts 10 week feasibility studies that apply Earth observation data to address community priorities and support informed decision making. Part of NASA’s Earth Action Capacity Building Program, DEVELOP builds skills in both participants ( recent graduates, and early/transitioning career professionals), who work on small interdisciplinary project teams, and partner organizations (state and local governments, federal agencies, non profit and for profit organizations, universities, and international organizations) that work closely with DEVELOP to design the project. Projects address a wide variety of environmental issues, such as disaster risk and resilience, air pollution, and the impact of urban development, with a growing number of projects exploring how satellite data can help inform decision making around environmental injustices. A subset of DEVELOP partner organizations are local municipalities or community led non profits, with the co production model serving as an effective engagement tool and an introduction for communities to engage in Earth science research and become familiar with satellite remote sensing. This presentation will highlight the DEVELOP co production model, community project use cases, and lessons learned in partnering with local communities.

Michael Pazmino

Response of Subsurface Nitrogen-Cycling Microbial Communities to Environmental Fluctuations (Final Technical Report)

Riparian floodplains are dynamic ecosystems linking terrestrial and riverine systems. These floodplains experience hydrological shifts such as changes in water table height, flooding, and drought and can be ‘hotspots’ of biogeochemical cycling due to shifting sediment moisture (and saturation) and subsurface exchanges of water, nutrients, and other compounds across different sediment layers. Subsurface microbial communities are the primary drivers of biogeochemical processes in floodplains, and thus their structure and function can directly influence both surface and groundwater quality. The microbial nitrogen (N) cycle is particularly important in floodplains as it affects nutrient availability and removal. Two functional guilds of chemoautotrophic (i.e. CO2-fixing) microorganisms are responsible for the first oxidative step of the N cycle, nitrification: ammonia-oxidizing archaea (AOA) and bacteria (AOB) catalyze the oxidation of ammonia to nitrite, while nitrite-oxidizing bacteria (NOB) oxidize nitrite to nitrate. Despite the critical role nitrification plays in N-cycling in both terrestrial and aquatic ecosystems, our understanding of the diversity, ecophysiology, and activity of nitrifying organisms in subsurface floodplain soils/sediments is extremely limited. To help address this critical knowledge gap, the overarching goal of this project was to determine how shifts in key environmental parameters and gradients impact microbial N-cycling communities/processes, with particular emphasis on nitrification, within hydrologically-variable floodplain sediments in the Wind River Basin near Riverton, Wyoming. The three specific objectives of this project were to: (1) to associate in situ environmental drivers of N cycling with distinct functional guilds; (2) determine the guild response to variation in key ecosystem drivers; and (3) develop a dynamic ecosystem model of the microbial N cycle with the Riverton subsurface using community genomic and biogeochemical data collected in the first two objectives. Over the course of this project, we employed both 16S rRNA gene amplicon sequencing and genome-resolved metagenomics to examine the phylogenetic diversity and metabolic potential of subsurface nitrifier communities within 68 samples collected across multiple sites, depths, and time points within the Riverton floodplain, allowing for both spatial and temporal investigations at different scales. This project benefitted tremendously from recent advances in high-throughput sequencing technologies coupled with dramatic improvements in the computational tools and algorithms available for analyzing such large, complex genomic datasets. By pairing these cutting-edge genomic approaches with depth-resolved sampling and detailed geochemical analyses of the Riverton floodplain, we have gained novel insights into the structure and function of subsurface nitrifier communities in relation to both hydrology and biogeochemistry. This project resulted in the most detailed and comprehensive characterization of N-cycling floodplain microbial communities to date and will hopefully inspire and pave the way for future studies using similar approaches in other floodplains. Indeed, such information is critical for understanding subsurface biogeochemical cycling and how elemental stores are altered from perturbations initiated by the water cycle within floodplains. Finally, because of the terrestrial-aquatic nature of the Riverton floodplain, results from this project are also of relevance to disciplines such as soil science, estuarine science, limnology & oceanography, biogeochemistry, geobiology, environmental engineering, as well as genomics and data science.

54 ENVIRONMENTAL SCIENCES

Community Dynamics Drive Calcium Carbonate Production in an Enriched Consortium of Soil Microbes

Recently, there has been a focus on using soil microbes as a means to store carbon in the soil in the form of calcium carbonate, outcomes of which include soil stabilization and biocementation. The molecular processes involved in microbially induced calcium carbonate formation are known, but there is still a significant knowledge gap regarding how community interactions, emergent processes that are distinct from the roles of individual members, may drive the formation of carbonate. To answer these questions, we describe the development and application of a consortium of soil microbes consisting of one species each of the Rhodococcus , Microbacterium , and Curtobacterium genera and two species from the Bacillus genus. We term these five species cultivated together carbon storing consortium A (CSC-A). Growth assays show that only a subset of CSC-A members produces CaCO 3 with Rhodococcus producing the most CaCO 3 but the complete CSC-A produces significantly higher amounts of CaCO 3 compared to the sum total carbonate produced by all member species. The development of CSC-A shows that CaCO 3 production may be as much a community process as it is the contribution of individual species, requiring us to move beyond single species analysis to fully understand carbonate formation by microbial communities in nature. CSC-A will allow the scientific community to ask and answer key questions about the molecular interactions surrounding inorganic carbon formation in soil, an important knowledge gap that must be filled if we wish to stabilize soils and harness microbial processes for materials production.

calcium carbonate

Synthetic communities as a model for determining interactions between a biofertilizer chassis organism and native microbial consortia

Biofertilizers are critical for sustainable agriculture because they can replace ecologically disruptive chemical fertilizers while improving the trajectory of soil and plant health. However, for improving deployment, the persistence of biofertilizers within native soil consortia must be elucidated and enhanced. In this study we characterized a high-throughput, modular, and automation-friendly in vitro approach to screen for biofertilizer persistence within soil-derived consortia after co-cultivation with stable synthetic soil microbial communities (SynComs) obtained through a top-down cultivation process. Here, we profiled ~1200 SynComs isolated from various soil sources and cultivated in divergent media types, and we detected significant phylogenetic diversity (e.g. Shannon index >4) and richness (observed richness >400) across these communities. We observed high reproducibility in SynCom community structure from common soil and media types, which provided a testbed for assessing biofertilizer persistence within representative native consortia. Furthermore, we demonstrated that the screening method described herein can be coupled with microbial engineering to efficiently identify soil-derived SynComs in which an engineered biofertilizer organism (i.e. Bacillus subtilis) persists. Accordingly, we discovered that B. subtilis persisted in ~10% of SynComs that generally followed the diversity–invasion principle. Additionally, our approach enabled analysis of the ecological impact of B. subtilis inoculation on SynCom structure and profile alterations in community diversity and richness associated with the presence of a genetically modified model bacterium. Ultimately, this work has established a modular pipeline that could be integrated into a variety of microbiology/microbiome-relevant workflows or related applications that would benefit from assessment of the persistence of a specific organism of interest and its interaction with native consortia.

biofertilizers

Energy Justice Through Energy Storage: Supporting Energy Resilience in Disadvantaged Communities

This paper reviews energy storage technologies as a possible solution to address power outages and mitigate the impacts, enhancing vulnerable communities’ resilience to climate change. More frequent and severe extreme weather events are one of the main consequences of climate change. These events, coupled with the nation’s aging and frail energy infrastructure, are causing many communities throughout the United States to experience more frequent and longer power outages, resulting in economic, health, and social impacts. Impacts from power outages are not equally felt across communities, with disproportionate impacts across communities representing a matter of energy justice. From an energy justice standpoint, programs and policies that facilitate energy storage technologies should be intentionally designed to include distributive, procedural, recognition, and restorative justice.

25 ENERGY STORAGE

Microbial Community Changes across Time and Space in a Constructed Wetland

Constructed wetlands are artificial ecosystems designed to replicate natural wetland processes. Microbial communities play a pivotal role in cycling essential elements, particularly sulfur, which is crucial for trace metal fixation and remobilization in these ecosystems. By their response to their environment, microbial communities act as biological indicators of the wetland performance. To address knowledge gaps pertinent to the changes in trace metal bioavailability in relation to microbial activities in the H-02 constructed wetland, we performed this study to investigate temporal and spatial variations in microbial communities by using molecular biology tools. Quantitative polymerase chain reaction and next generation sequencing techniques were employed to analyze archaeal and bacterial groups associated with sulfur and methane cycling. Alpha diversity indices were used to assess species richness, evenness, and dominance. Results indicated high gene abundance of Desulfuromonas (5.37 × 10 6 g.cell –1 ), methane oxidizing bacteria (6.92 × 10 6 g.cell –1 ), and methanogenic microorganisms (3.02 × 10 5 g.cell –1 ) during cool months. Warm months were marked by sulfate reducing bacteria dominance (3.31 × 10 6 g.cell –1 ), potentially due to competitive interactions and environmental conditions, higher temperatures, and lower redox potential. Spatial variability among microbial groups was insignificant, but trends in gene abundance indicated complex factors influencing these groups. Next generation sequencing data demonstrated Firmicutes as the most abundant phylum with over 50% regardless of the season or sampling location. Cool months exhibited higher alpha diversity than warm months. Overall, this study showed that seasonal changes significantly impacted the microbial communities in the H-02 constructed wetland that are associated with the sulfur cycle and eventually trace metal biogeochemistry, revealing two distinct mechanisms of the sulfur cycle between the two main seasons, whereas spatial variability effects were not conclusive.

54 ENVIRONMENTAL SCIENCES

Advancing community-engaged research for offshore wind on the West Coast

The Biden Administration has called for 30 GW of offshore wind (OSW) to be implemented by 2030 and 15 GW of floating OSW by 2035. Because floating OSW is a novel technology for the West Coast, the United States, and the world, there is limited information about the implications of floating OSW for coastal communities. Floating OSW faces a complex regulatory landscape and a wide set of interested parties that stand to gain or lose based on the development process and outcomes. Key agencies are often siloed in their mission space, with little attention or resources for innovation in planning. Furthermore, many communities along the West Coast of the U.S. have experienced the boom-and-bust cycles of large, extractive industries that use coastal resources to benefit consumers in other locations, while leaving behind few long-lasting benefits at the local level. These siloes in government and civic society, and the lack of trust born out of past failures, make it difficult for communities, government agencies, scientists, and industry to plan for OSW based on community values and concerns. There is a need to develop projects that more equitably distribute benefits while safeguarding the ocean ecosystems upon which coastal populations depend.

17 WIND ENERGY

Community Solar Consolidated Billing: An Exploration of Implementation and Alternatives

The report presents an analysis of the considerations, costs, and benefits surrounding the implementation of utility consolidated billing in community solar programs while also exploring alternatives to achieve similar benefits in its absence. Consolidated billing simplifies the billing process for customers by combining all charges and credits associated with electricity service and community solar subscriptions into a single bill. The potential benefits of consolidated billing implementation include increased transparency, improved customer experience, and ultimately increased retention rates and decreased subscriber acquisition costs. Currently, community solar subscribers often receive two separate bills - one from the utility and one from a third-party community solar provider - potentially causing confusion. Consolidated billing seeks to resolve this by offering a unified bill, which, while beneficial to numerous stakeholders, presents administrative, technical, and financial hurdles that utilities and program administrators must address.

14 SOLAR ENERGY

Equitable Resilience: Opportunities to Advance Solar Paired with Battery Storage in Historically Marginalized Communities

This report was produced as part of the Equitable Solar Communities of Practice program through the U.S. Department of Energy (DOE) Solar Energy Technologies Office (SETO). Clean Energy Group (CEG) managed the Resilience, Storage, and Grid Benefits Community of Practice, which aimed to research, evaluate, and identify opportunities to scale the meaningful benefits of solar paired with battery storage in historically marginalized communities. The report is designed to 1) educate a broad audience on the benefits of solar paired with battery storage, 2) identify barriers to deploying solar paired with battery storage in historically marginalized communities, 3) amplify early-adopters and innovative programs that support battery storage access across the nation, and 4) recommend best practices for programs and policies to adopt in advancing equitable access to solar and battery storage technologies.

14 SOLAR ENERGY

Communities LEAP: Microgrids 101 [Slides]

Through the Communities Local Energy Action Program (LEAP), NREL is providing technical assistance to a coalition of stakeholders from Oakridge, Oregon. The coalition includes community-based non-profit organizations, the city government, the local utility, and others. Technical assistance provides analysis and information to support Oakridge stakeholders with their goals to increase energy reliability and resilience in the community, while promoting economic development. The Grid Resilience and Microgrids Learning Session was presented to the Oakridge coalition to provide foundational technical knowledge that can support decision-making about energy-related issues in the community.

24 POWER TRANSMISSION AND DISTRIBUTION

Community Solar Consolidated Billing: An Exploration of Implementation and Alternatives [Slides]

This presentation is an abridged version of the report it is based on that presents an analysis of the considerations, costs, and benefits surrounding the implementation of utility consolidated billing in community solar programs while also exploring alternatives to achieve similar benefits in its absence. Consolidated billing simplifies the billing process for customers by combining all charges and credits associated with electricity service and community solar subscriptions into a single bill. The potential benefits of consolidated billing implementation include increased transparency, improved customer experience, and ultimately increased retention rates and decreased subscriber acquisition costs. Currently, community solar subscribers often receive two separate bills - one from the utility and one from a third-party community solar provider - potentially causing confusion. Consolidated billing seeks to resolve this by offering a unified bill, which, while beneficial to numerous stakeholders, presents administrative, technical, and financial hurdles that utilities and program administrators must address.

14 SOLAR ENERGY

Energy to Communities Program Short Introduction: Evaluation of Enhanced Geothermal System for Cornell District Heating [Slides]

Through the U.S. Department of Energy's Energy to Communities (E2C) program, NLR, other national laboratory experts, and select organizations provide Expert Match - free, short-term technical assistance to address near-term energy challenges and questions. Expert Match is for community stakeholders who have decision-making power or influence in their community but need access to additional energy expertise to inform key upcoming decisions. This Expert Match request supported Cornell University (Itaca, NY) community efforts in developing Enhanced Geothermal System (EGS) reservoir performance, by simulating fracture flow to estimate pressure drop, flow distribution, and heat extraction efficiency in fractured rock. Thermal drawdown modeling was used to assess long-term resource sustainability, while system optimization studies refined key parameters such as well configuration and flow rate to improve overall reservoir efficiency.

15 GEOTHERMAL ENERGY