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At least 181 records · Page 10

PDF Entity Annotation Tool (PEAT)

While different text mining approaches – including the use of Artificial Intelligence (AI) and other machine based methods - continue to expand at a rapid pace, the tools used by researchers to create the labeled datasets required for training, modeling, and evaluation remain rudimentary. Labeled datasets contain the target attributes the machine is going to learn; for example, training an algorithm to delineate between images of a car or truck would generally require a set of images with a quantitative description of the underlying features of each vehicle type. Development of labeled textual data that can be used to build natural language machine learning models for scientific literature is not currently integrated into existing manual workflows used by domain experts. Published literature is rich with important information, such as different types of embedded text, plots, and tables that can all be used as inputs to train ML/natural language processing (NLP) models, when extracted and prepared in machine readable formats. Currently, both normalized data extraction of use to domain experts and extraction to support development of ML/NLP models are labor intensive and cumbersome manual processes. Automatic extraction of data and information from formats such as PDFs that are optimized for layout and human readability, not machine readability. The PDF (Portable Document Format) Entity Annotation Tool (PEAT) was developed with the goal of allowing users to annotate publications within their current print format, while also allowing those annotations to be captured in a machine-readable format. One of the main issues with traditional annotation tools is that they require transforming the PDF into plain text to facilitate the annotation process. While doing so lessens the technical challenges of annotating data, the user loses all structure and provenance that was inherent in the underlying PDF. Also, textual data extraction from PDFs can be an error prone process. Challenges include identifying sequential blocks of text and a multitude of document formats (multiple columns, font encodings, etc.). As a result of these challenges, using existing tools for development of NLP/ML models directly from PDFs is difficult because the generated outputs are not interoperable. We created a system that allows annotations to be completed on the original PDF document structure, with no plain text extraction. The result is an application that allows for easier and more accurate annotations. In addition, by including a feature that grants the user the ability to easily create a schema, we have developed a system that can be used to annotate text for different domain-centric schemas of relevance to subject matter experts. Different knowledge domains require distinct schemas and annotation tags to support machine learning.

97 MATHEMATICS AND COMPUTING↗

Workflow-based automatic processing for Internet of Floating Things crowdsourced data

Data from sensors incorporated into mobile devices, such as networked navigational sensors, can be used to capture detailed environmental information. We describe here a workflow and framework for using sensors on boats to construct unique new datasets of underwater topography (bathymetry). Starting with a large number of measurements of position, depth, etc., obtained from such an Internet of Floating Things, we illustrate how, with a specialized protocol, data can be communicated to cloud resources, even when using delayed, intermittent, or disconnected networks. We then propose a method for automatic sensor calibration based on a novel reputation approach. Sampled depth data are interpolated efficiently on a cloud computing platform in order to provide a continuously updated bathymetric database. Our prototype implementation uses the FACE-IT Galaxy workflow engine to manage network communication and exploits the computational power of GPGPUs in a virtualized cloud environment, working with a CUDA-parallel algorithm, for efficient data processing. We report on an initial evaluation involving data from a sailing vessel in Italian coastal waters.

97 MATHEMATICS AND COMPUTING↗

IDC Reengineering Phase 2 Project Scope

The Comprehensive Nuclear-Test-Ban Treaty Organization (CTBTO) operates the International Data Centre (IDC) to support treaty verification activities by Member States. The IDC collects, stores, processes, and distributes data from seismic, hydroacoustic, infrasound, and radionuclide stations. A significant component of the IDC is the seismic, hydroacoustic, and infrasound (SHI) processing system. The IDC has recognized the need to reengineer the SHI processing system and has defined a three-phase reengineering effort. IDC Reengineering Phase 1 (RP1) started in 2011 with the goal to significantly modernize SHI automatic and interactive data processing software, focusing on enhancements to individual components of the system. Reengineering Phase 2 (RP2), started in 2014, addresses the task of specifying a unified architecture for all SHI software, across processing stages, to pave the way for further software development and sustainment in the future. A key objective of RP2 is an architecture sufficient to provide a basis for a cost estimate for the development or enhancement of the software components and subsystems. This report provides a brief description of the scope of the IDC Reengineering Phase 2 project. It describes the goals and objectives of reengineering, the system definition, and the technical scope of the system.This report expands upon the “Scope for IDC Reengineering Phase 2”, July 2014, ECS-DIS-WGB-43-PTS-MATERIAL-12-ADD-1, produced by the IDC.

58 GEOSCIENCES↗

An automated system for continuous monitoring of CO 2 geosequestration using multi-well offset VSP with permanent seismic sources and receivers: Stage 3 of the CO2CRC Otway Project

Time-lapse seismic is an essential tool for monitoring CO 2 injection into the subsurface but suffers from high cost and long intervals between surveys. An alternative approach is continuous monitoring using permanent sources and receivers capable of mapping CO 2 plume evolution on an almost daily basis and drastically reduce human effort, cost and survey turnaround. As part of the CO2CRC Otway project, a continuous monitoring system is employed to monitor a small (15,000 tonnes) CO 2 injection within the CO2CRC Otway Project. The permanent monitoring system employs distributed acoustic sensors (DAS) installed in boreholes as seismic receivers and seismic orbital vibrators (SOV) as seismic sources. The monitoring approach is based on vertical seismic profiling using five wells equipped with DAS cemented behind the casing and nine SOVs and is acquiring the data continuously in an autonomous manner. The data is then automatically processed on-site producing a seismic image every 2.5 days, which is then transmitted to a remote office. The data has good repeatability with NRMS of about ~10-15%.

58 GEOSCIENCES↗

Automated Analysis, Reporting, and Archiving for Robotic Nondestructive Assay of Holdup Deposits - 19508

To decommission deactivated gaseous diffusion enrichment facilities, miles of contaminated pipe must be measured. The current method requires thousands of manual measurements, repeated manual data transcription, and months of manual analysis. The Pipe Crawling Activity Measurement System (PCAMS), developed by Carnegie Mellon University and in commissioning for use at the DOE Portsmouth Gaseous Diffusion Enrichment Facility, uses a robot to measure Uranium-235 from inside pipes and automatically log the data. Radiation measurements, as well as imagery, geometric modeling, and precise measurement positioning data are digitally transferred to the PCAMS server. On the server, data can be automatically processed in minutes and summarized for analyst review. Measurement reports are auto-generated with the push of a button. A database specially-configured to hold heterogeneous data such as spectra, images, and robot trajectories serves as archive. This paper outlines the features and design of the PCAMS Post-Processing Software, currently in commissioning for use at the Portsmouth Gaseous Diffusion Enrichment Facility. The analysis process, the analyst interface to the system, and the content of auto-generated reports are each described. Example pipe-interior geometric surface models, illustration of how key report features apply in operational runs, and user feedback are discussed. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

An analysis of maximum vertical gusts recorded at NASA's 150-meter ground winds tower facility at Kennedy Space Center, Florida

A statistical summary is presented of vertical wind speed data recorded at NASA's 150-Meter Ground Winds Tower Facility on Merritt Island, Kennedy Space Center, Florida. One year of continuous around-the-clock vertical wind speed measurements processed by the Automatic Data Acquisition System (ADAS) is classified as a function of tower level (10, 18, 60, and 150 meters) and period of reference day, month, season: winter (October through March) and summer (April through September), and annual. Intensity, frequency, time of occurrence, prevailing conditions, etc., of the daily maximum vertical gusts (i.e., updraft and downdraft) are determined. The results are compared with the vertical gusts associated with the daily maximum horizontal gust. The intent of this summarization of vertical wind speed data is to provide a general description of wind flow in the lower 150 meters of the atmosphere for the identification of hazards involved in wind shear encounters relative to ascent and descent of the Space Shuttle and conventional aircraft.

Alexander, M. B.↗

Application of LANDSAT data to the study of urban development in Brasilia

The urban growth of Brasilia within the last ten years is analyzed with special emphasis on the utilization of remote sensing orbital data and automatic image processing. The urban spatial structure and the monitoring of its temporal changes were examined in a whole and dynamic way by the utilization of MSS-LANDSAT images for June (1973, 1978 and 1983). In order to aid data interpretation, a registration algorithm implemented in the Interactive Multispectral Image Analysis System (IMAGE-100) was utilized aiming at the overlap of multitemporal images. The utilization of suitable digital filters, combined with the images overlap, allowed a rapid identification of areas of possible urban growth and oriented the field work. The results obtained in this work permitted an evaluation of the urban growth of Brasilia, taking as reference the proposal stated for the construction of the city in the Pilot Plan elaborated by Lucio Costa.

Parada, N. D. J.↗

Study of the urban evolution of Brasilia with the use of LANDSAT data

The urban growth of Brasilia within the last ten years is analyzed with special emphasis on the utilization of remote sensing orbital data and automatic image processing. The urban spatial structure and the monitoring of its temporal changes were focused in a whole and dynamic way by the utilization of MSS-LANDSAT images for June 1973, 1978 and 1983. In order to aid data interpretation, a registration algorithm implemented at the Interactive Multispectral Image Analysis System (IMAGE-100) was utilized aiming at the overlap of multitemporal images. The utilization of suitable digital filters, combined with the images overlap, allowed a rapid identification of areas of possible urban growth and oriented the field work. The results obtained permitted an evaluation of the urban growth of Brasilia, taking as reference the proposed stated for the construction of the city.

Deoliveira, M. D. N.↗

Application of software technology to automatic test data analysis

The verification process for a major software subsystem was partially automated as part of a feasibility demonstration. The methods employed are generally useful and applicable to other types of subsystems. The effort resulted in substantial savings in test engineer analysis time and offers a method for inclusion of automatic verification as a part of regression testing.

Stagner, J. R.↗

Industrial realization of a direct Fourier transform in automated experimental data processing systems

Fourier processing of automatic signals transforms direct current voltage into a numerical form through bandpass filtration in time-pulse multiplying devices. It is shown that the ratio of the interference energy to the useful signal energy is inversely proportional to the square of the product of the depth of the width modulation and the ratio of the time constant averaging to the cross-multiplied signals.

Lyubashevskiy, G. S.↗

Multi-band automatic sun and sky scanning radiometer system for measurement of aerosols

A weather resistant automatic scanning Sun photometer system is assessed and demonstrated as practical for measurements of aerosol concentrations and properties at remote sites. Interfaced with a transmitter using the Geostationary Data Collection System (GDCS), the data are processed in near real time. The processing allows a time dependence of the aerosols and water vapor and an ongoing assessment of the health and calibration of the instruments. The system's automatic data acquisition, transmission, and processing offer immediate application to atmospheric monitoring and modeling on a regional to global scale and validation of satellite retrievals. It is estimated that under normal circumstances the retrieved aerosol optical thickness has a network wide accuracy of +/- 0.02 from 340 nm to 1020 nm, water vapor +/- 0.2 cm and size distribution from 0.1 to 3 micrometers.

Holben, B. N.↗

Development of Solar Flare and Energetic Particle Prediction Portal (SEP 3 )

Solar activity is a primary factor determining the state of the Earth’s space environment, geomagnetic and ionospheric disturbances, and radiation hazards. In the current state of knowledge, machine learning (ML) methods provide essential tools for processing data, investigating relationships among various physical properties and characteristics, uncovering hidden connections, and predicting hazardous solar events. The primary difficulty in developing and applying modern machine-learning tools in heliophysics is that the essential data are scattered among over a hundred data repositories developed by instrument teams of space missions and ground-based observatories. In addition, statistical and ML methods require long time series of homogeneous measurements. To facilitate ML-ready data preparation and access, we have developed an interactive database of solar flares integrating the most essential datasets (https://solarflare.njit.edu/). The database performs an initial data processing and is automatically updated. In addition, we are developing the Solar Energetic Particle Prediction Portal (SEP3, https://sun.njit.edu/SEP3), which hosts web applications that allow users to retrieve the database records. The Portal has a search page for browsing the events from the most widely used catalogs and a dedicated space to share the most recent achievements of the team. The interactive widget can display soft X-ray and proton flux time series from GOES satellites and the flare records. The data portal has been used to evaluate the forecasts of solar proton events and investigate machine-learning approaches to SEP prediction.

SMD↗

Epidural anesthesia needle guidance by forward-view endoscopic optical coherence tomography and deep learning

Epidural anesthesia requires injection of anesthetic into the epidural space in the spine. Accurate placement of the epidural needle is a major challenge. To address this, we developed a forward-view endoscopic optical coherence tomography (OCT) system for real-time imaging of the tissue in front of the needle tip during the puncture. We tested this OCT system in porcine backbones and developed a set of deep learning models to automatically process the imaging data for needle localization. A series of binary classification models were developed to recognize the five layers of the backbone, including fat, interspinous ligament, ligamentum flavum, epidural space, and spinal cord. The classification models provided an average classification accuracy of 96.65%. During puncture, it is important to maintain a safe distance between the needle tip and the dura mater. Regression models were developed to estimate that distance based on the OCT imaging data. Based on the Inception architecture, our models achieved a mean absolute percentage error of 3.05% ± 0.55%. Overall, our results validated the technical feasibility of using this novel imaging strategy to automatically recognize different tissue structures and measure the distances ahead of the needle tip during the epidural needle placement.

60 APPLIED LIFE SCIENCES↗

Enhanced Weather Radar (EWxR) System

An airborne weather radar system, the Enhanced Weather Radar (EWxR), with enhanced on-board weather radar data processing was developed and tested. The system features additional weather data that is uplinked from ground-based sources, specialized data processing, and limited automatic radar control to search for hazardous weather. National Weather Service (NWS) ground-based Next Generation Radar (NEXRAD) information is used by the EWxR system to augment the on-board weather radar information. The system will simultaneously display NEXRAD and on-board weather radar information in a split-view format. The on-board weather radar includes an automated or hands-free storm-finding feature that optimizes the radar returns by automatically adjusting the tilt and range settings for the current altitude above the terrain and searches for storm cells near the atmospheric 0-degree isotherm. A rule-based decision aid was developed to automatically characterize cells as hazardous, possibly-hazardous, or non-hazardous based upon attributes of that cell. Cell attributes are determined based on data from the on-board radar and from ground-based radars. A flight path impact prediction algorithm was developed to help pilots to avoid hazardous weather along their flight plan and their mission. During development the system was tested on the NASA B757 aircraft and final tests were conducted on the Rockwell Collins Sabreliner.

Kronfeld, Kevin M.↗

CCSI Toolset 3.19 Release

CCSI Toolset 3.19 Release Highlights A gradient generation tool was developed to support GENN models in FOQUS. Certain machine learning tools train gradient-enhanced neural network (GENN) models which can be more accurate for complex datasets given a priori knowledge of model derivatives. However, the derivatives must be known beforehand and are not often available for process data. This tool automatically predicts the gradients for a training dataset in a form usable by common GENN trainers, such as Surrogate Modeling Toolbox. Support was added for Surrogate Modeling Toolbox GENN models in FOQUS, including updates to the run methods, node properties, test framework, documentation and optional dependencies list. Users can train/save Surrogate Modeling Toolbox gradient-enhanced neural network (GENN) models with custom objects and produce .pkl files compatible with the Machine Learning/Artificial Intelligence Plugin in FOQUS. A simpler implementation of the ordering algorithm in the Sequential Design of Experiments (SDOE) module was included. The SDOE examples documentation was updated. The Optimality-Based Design of Experiments was updated to improve the error handling when the results are None.

AS↗

Demonstration of a Rapid HPLC-ICPMS Direct Coupling Technique Using IDMS-Project Report: Part I

Staff members working in chemical separations and inductively coupled plasma mass spectrometry have developed a rapid separation-direct analysis scheme to determine both concentration and isotopics of a suite of elements down to the low picogram level. To reach the goal of rapid analysis of post-detonation nuclear materials, this first phase in method development has shown both the sensitivity and stability to achieve the precise, low-level analyses required. By coupling a high pressure ion chromatography system to an inductively coupled plasma mass spectrometer, researchers can achieve online analysis of the separated components of the sample directly. Using theT hermo Scientific™ Qtegra™ analysis software, the data has been processed automatically to yield precise isotopic composition and concentrations.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗

Auxiliary circuit enables automatic monitoring of EKG'S

Auxiliary circuits allow direct, automatic monitoring of electrocardiograms by digital computers. One noiseless square-wave output signal for each trigger pulse from an electrocardiogram preamplifier is produced. The circuit also permits automatic processing of cardiovascular data from analog tapes.

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