YeastWGD2025

David, Kyle (ORCID:000000019907789X); Rokas, Antonis [Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA; Evolutionary Studies Initiative, Vanderbilt University, Nashville, TN 37235, USA]

doi:10.6084/m9.figshare.29852876

DOE OSTI · 3015676

YeastWGD2025

David, Kyle (ORCID:000000019907789X)·Rokas, Antonis [Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA; Evolutionary Studies Initiative, Vanderbilt University, Nashville, TN 37235, USA]

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Abstract

Supplementary data for Discovery of additional ancient genome duplications in yeasts wgd_syn / - directory containing wgd syn output for all contiguous genomes [dataset] Tree - phylogeny [dataset]Duplications - duplication table from OrthoFinder output KOannotations - KEGG annotations used for enrichment analysis IPRannotations - InterPro annotations used for enrichment analysis DipodascalesOrthogroups - formatted orthogroup assignments for Dipodascales genes.fa and .gff3 files for each new genome assembly are also provided, those these are not required to replicate the analysis

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David, Kyle (ORCID:000000019907789X), Rokas, Antonis [Department of Biological Sciences, Vanderbilt University, Nashville, TN 37235, USA; Evolutionary Studies Initiative, Vanderbilt University, Nashville, TN 37235, USA]. 2025-01-01. YeastWGD2025. https://doi.org/10.6084/m9.figshare.29852876

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