Engineering topics
Yu, Han
Publications and source records attributed to Yu, Han.
Pathway Evolution Through a Bottlenecking-Debottlenecking Strategy and Machine Learning-Aided Flux Balancing
The evolution of pathway enzymes enhances the biosynthesis of high-value chemicals, crucial for pharmaceutical, and agrochemical applications. However, unpredictable evolutionary landscapes of pathway genes often hinder successful evolution. Here, the presence of complex epistasis is identifued within the representative naringenin biosynthetic pathway enzymes, hampering straightforward directed evolution. Subsequently, a biofoundry-assisted strategy is developed for pathway bottlenecking and debottlenecking, enabling the parallel evolution of all pathway enzymes along a predictable evolutionary trajectory in six weeks. This study then utilizes a machine learning model, ProEnsemble, to further balance the pathway by optimizing the transcription of individual genes. The broad applicability of this strategy is demonstrated by constructing an Escherichia coli chassis with evolved and balanced pathway genes, resulting in 3.65 g L -1 naringenin. The optimized naringenin chassis also demonstrates enhanced production of other flavonoids. This approach can be readily adapted for any given number of enzymes in the specific metabolic pathway, paving the way for automated chassis construction in contemporary biofoundries.
UniKP: a unified framework for the prediction of enzyme kinetic parameters
Prediction of enzyme kinetic parameters is essential for designing and optimizing enzymes for various biotechnological and industrial applications, but the limited performance of current prediction tools on diverse tasks hinders their practical applications. Here, we introduce UniKP, a unified framework based on pretrained language models for the prediction of enzyme kinetic parameters, including enzyme turnover number (k cat ), Michaelis constant (K m ), and catalytic efficiency (k cat / K m ), from protein sequences and substrate structures. A two-layer framework derived from UniKP (EF-UniKP) has also been proposed to allow robust k cat prediction in considering environmental factors, including pH and temperature. In addition, four representative re-weighting methods are systematically explored to successfully reduce the prediction error in high-value prediction tasks. We have demonstrated the application of UniKP and EF-UniKP in several enzyme discovery and directed evolution tasks, leading to the identification of new enzymes and enzyme mutants with higher activity. UniKP is a valuable tool for deciphering the mechanisms of enzyme kinetics and enables novel insights into enzyme engineering and their industrial applications.
Auxiliary sequential deposition enables 19%-efficiency organic solar cells processed from halogen-free solvents
High-efficiency organic solar cells are often achieved using toxic halogenated solvents and additives that are constrained in organic solar cells industry. Therefore, it is important to develop materials or processing methods that enabled highly efficient organic solar cells processed by halogen free solvents. In this paper, we report an innovative processing method named auxiliary sequential deposition that enables 19%-efficiency organic solar cells processed by halogen free solvents. Our auxiliary sequential deposition method is different from the conventional blend casting or sequential deposition methods in that it involves an additional casting of dithieno[3,2-b:2’,3’-d]thiophene between the sequential depositions of the donor (D18-Cl) and acceptor (L8-BO) layers. The auxiliary sequential deposition method enables dramatic performance enhancement from 15% to over 18% compared to the blend casting and sequential deposition methods. Furthermore, by incorporating a branched-chain-engineered acceptor called L8-BO-X, device performance can be boosted to over 19% due to increased intermolecular packing, representing top-tier values for green-solvent processed organic solar cells. Comprehensive morphological and time-resolved characterizations reveal that the superior blend morphology achieved through the auxiliary sequential deposition method promotes charge generation while simultaneously suppressing charge recombination. This research underscores the potential of the auxiliary sequential deposition method for fabricating highly efficient organic solar cells using environmentally friendly solvents.
Optimizing spectral and morphological match of nonfullerene acceptors toward efficient indoor organic photovoltaics with enhanced light source adaptability
High-performance indoor organic photovoltaics (IOPV) require large-bandgap material systems to absorb visible light efficiently and reduce energy loss. However, state-of-the-art non-fullerene acceptors (NFAs) have absorptions in the near-infrared region and are thus not suitable for IOPV applications. Herein, we report a series of large-bandgap (>1.70 eV) NFAs named FCC-Cl-C8, FCC-Cl-4Ph and FCC-Cl-6Ph by modifying the alkyl side chains with alkylphenyl chains partially or completely. Results show that the bulky alkylphenyl side chains can finely tune the absorption properties of the NFAs and also affect their morphological properties. Interestingly, the best-performing NFA is the one (named FCC-Cl-4Ph) with partial alkyl and alkylphenyl substitutions, which blue-shift the absorption of the NFAs while minimizing the negative morphological effect of the bulky alkylphenyl chains. As a result, FCC-Cl-4Ph can achieve excellent indoor efficiencies over 29% under a 3000 K LED lamp at 1000 lux and show better solution processability over FCC-Cl-C8. More importantly, FCC-Cl-4Ph can maintain high indoor performance (29.7–26.8% at 1000 lux) under a wide range of indoor lighting spectra (2600, 3000, 4000, and 6500 K LED lamps), which should be due to the blue-shifted spectra of FCC-Cl-4Ph and better matching with various indoor conditions. Finally, this work reveals an interesting structure-property relationship and offers useful strategies for the further design of NFAs toward efficient IOPV devices.
Improving the Comprehensive Performance of Na 0.7 MnO 2 for Sodium Ion Batteries by ZrO 2 Atomic Layer Deposition
Sodium ion batteries with Na-Mn-O compounds as cathode have been widely studied as substitutes for lithium ion batteries due to their abundant resources. Still, the relatively poor cycling stability and low capacity of Na-Mn-O compounds significantly limit their applications. Different approaches, including element substitution and surface modification, have been applied to improve the electrochemical performance of those cathode materials. Herein, element doping and coating of ZrO 2 on Na 0.7 MnO 2 particles have been achieved by atomic layer deposition (ALD) followed by post-annealing. The rate capability and cycling stability of the modified material were significantly improved, and the mechanism of performance enhancement was revealed. The ZrO 2 coatings acted as a stable interfacial layer to enhance the cycling stability of Na 0.7 MnO 2 by suppressing side reactions between the electrode and electrolyte. The doping of transition metal ions reduced energy barriers for sodium ion insertion and deintercalation during cycling, further improving the charge and discharge capacity and rate performance of Na 0.7 MnO 2 .
Microbially Synthesized Polymeric Amyloid Fiber Promotes [beta]-Nanocrystal Formation and Displays G
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A Difluoro‐Monobromo End Group Enables High‐Performance Polymer Acceptor and Efficient All‐Polymer Solar Cells Processable with Green Solvent under Ambient Condition
Abstract In this paper, a difluoro‐monobromo end group is designed and synthesized, which is then used to construct a novel polymer acceptor (named PY2F‐T) yielding high‐performance all‐polymer solar cells with 15.22% efficiency. The fluorination strategy can increase the intramolecular charge transfer and interchain packing of the previous PY‐T based acceptor, and significantly improve photon harvesting and charge mobility of the resulting polymer acceptor. In addition, detailed morphology investigations reveal that the PY2F‐T‐based blend shows smaller domain spacing and higher domain purity, which significantly suppress charge recombination as supported by time‐resolved techniques. These polymer properties enable simultaneously enhanced J SC and FF of the PY2F‐T‐based devices, eventually delivering device efficiencies of over 15%, significantly outperforming that of the devices based on the non‐fluorinated PY‐T polymer (13%). More importantly, the PY2F‐T‐based active layers can be processed under ambient conditions and still achieve a 14.37% efficiency. They can also be processed using non‐halogenated solvent o ‐xylene (no additive) and yield a decent performance of 13.05%. This work demonstrates the success of the fluorination strategy in the design of high‐performance polymer acceptors, which provide guidelines for developing new all‐PSCs with better efficiencies and stabilities for commercial applications.
Regio‐Regular Polymer Acceptors Enabled by Determined Fluorination on End Groups for All‐Polymer Solar Cells with 15.2 % Efficiency
Abstract Polymerization sites of small molecule acceptors (SMAs) play vital roles in determining device performance of all‐polymer solar cells (all‐PSCs). Different from our recent work about fluoro‐ and bromo‐ co‐modified end group of IC‐FBr (a mixture of IC‐FBr1 and IC‐FBr2), in this paper, we synthesized and purified two regiospecific fluoro‐ and bromo‐ substituted end groups (IC‐FBr‐ o & IC‐FBr‐ m ), which were then employed to construct two regio‐regular polymer acceptors named PYF‐T‐ o and PYF‐T‐ m , respectively . In comparison with its isomeric counterparts named PYF‐T‐ m with different conjugated coupling sites, PYF‐T‐ o exhibits stronger and bathochromic absorption to achieve better photon harvesting. Meanwhile, PYF‐T‐ o adopts more ordered inter‐chain packing and suitable phase separation after blending with the donor polymer PM6, which resulted in suppressed charge recombination and efficient charge transport. Strikingly, we observed a dramatic performance difference between the two isomeric polymer acceptors PYF‐T‐ o and PYF‐T‐ m . While devices based on PM6:PYF‐T‐ o can yield power conversion efficiency (PCE) of 15.2 %, devices based on PM6:PYF‐T‐ m only show poor efficiencies of 1.4 %. This work demonstrates the success of configuration‐unique fluorinated end groups in designing high‐performance regular polymer acceptors, which provides guidelines towards developing all‐PSCs with better efficiencies.
Regio‐Regular Polymer Acceptors Enabled by Determined Fluorination on End Groups for All‐Polymer Solar Cells with 15.2 % Efficiency
Abstract Polymerization sites of small molecule acceptors (SMAs) play vital roles in determining device performance of all‐polymer solar cells (all‐PSCs). Different from our recent work about fluoro‐ and bromo‐ co‐modified end group of IC‐FBr (a mixture of IC‐FBr1 and IC‐FBr2), in this paper, we synthesized and purified two regiospecific fluoro‐ and bromo‐ substituted end groups (IC‐FBr‐ o & IC‐FBr‐ m ), which were then employed to construct two regio‐regular polymer acceptors named PYF‐T‐ o and PYF‐T‐ m , respectively . In comparison with its isomeric counterparts named PYF‐T‐ m with different conjugated coupling sites, PYF‐T‐ o exhibits stronger and bathochromic absorption to achieve better photon harvesting. Meanwhile, PYF‐T‐ o adopts more ordered inter‐chain packing and suitable phase separation after blending with the donor polymer PM6, which resulted in suppressed charge recombination and efficient charge transport. Strikingly, we observed a dramatic performance difference between the two isomeric polymer acceptors PYF‐T‐ o and PYF‐T‐ m . While devices based on PM6:PYF‐T‐ o can yield power conversion efficiency (PCE) of 15.2 %, devices based on PM6:PYF‐T‐ m only show poor efficiencies of 1.4 %. This work demonstrates the success of configuration‐unique fluorinated end groups in designing high‐performance regular polymer acceptors, which provides guidelines towards developing all‐PSCs with better efficiencies.
Asymmetric Alkoxy and Alkyl Substitution on Nonfullerene Acceptors Enabling High‐Performance Organic Solar Cells
Abstract In this paper, a strategy of asymmetric alkyl and alkoxy substitution is applied to state‐of‐the‐art Y‐series nonfullerene acceptors (NFAs), and it achieves great performance in organic solar cell (OSC) devices. Since alkoxy groups can have a significant influence on the material properties of NFAs, alkoxy substitution is applied to the Y6 molecule in a symmetric manner. The resulting molecule (named Y6‐2O), despite showing improved open‐circuit voltage ( V oc ), yields extremely poor performance due to low solubility and excessive aggregation properties, a change that is due to the conformational locking effect of alkoxy groups. In contrast, asymmetric alkyl and alkoxy substitution on Y6, yields a molecule named Y6‐1O that can maintain the positive effect of V oc improvement and obtain reasonably good solubility. The resulting molecule Y6‐1O enables highly efficient nonfullerene OSCs with 17.6% efficiency and the asymmetric side‐chain strategy has the potential to be applied to other NFA‐material systems to further improve their performance.
Tailoring non-fullerene acceptors using selenium-incorporated heterocycles for organic solar cells with over 16% efficiency
The selenium substitution strategy was applied to develop two new A′-DAD-A′-type small molecular acceptors. The resulting selenium-incorporated molecules exhibit red-shifted absorption and an enhanced photon response, leading to high device efficiencies of over 16%.
Incorporation of alkylthio side chains on benzothiadiazole-based non-fullerene acceptors enables high-performance organic solar cells with over 16% efficiency
This is the first time alkylthio chains are employed on Y6-like NFAs to achieve organic solar cells of power conversion efficiency higher than 16%.
Random Polymerization Strategy Leads to a Family of Donor Polymers Enabling Well‐Controlled Morphology and Multiple Cases of High‐Performance Organic Solar Cells
Abstract Developing high‐performance donor polymers is important for nonfullerene organic solar cells (NF‐OSCs), as state‐of‐the‐art nonfullerene acceptors can only perform well if they are coupled with a matching donor with suitable energy levels. However, there are very limited choices of donor polymers for NF‐OSCs, and the most commonly used ones are polymers named PM6 and PM7, which suffer from several problems. First, the performance of these polymers (particularly PM7) relies on precise control of their molecular weights. Also, their optimal morphology is extremely sensitive to any structural modification. In this work, a family of donor polymers is developed based on a random polymerization strategy. These polymers can achieve well‐controlled morphology and high‐performance with a variety of chemical structures and molecular weights. The polymer donors are D–A1–D–A2‐type random copolymers in which the D and A1 units are monomers originating from PM6 or PM7, while the A2 unit comprises an electron‐deficient core flanked by two thiophene rings with branched alkyl chains. Consequently, multiple cases of highly efficient NF‐OSCs are achieved with efficiencies between 16.0% and 17.1%. As the electron‐deficient cores can be changed to many other structural units, the strategy can easily expand the choices of high‐performance donor polymers for NF‐OSCs.
Modulating Energy Level on an A‐D‐A′‐D‐A‐Type Unfused Acceptor by a Benzothiadiazole Core Enables Organic Solar Cells with Simple Procedure and High Performance
Unfused‐ring acceptors (UFAs) have gained considerable research attention as they offer simple chemical structures through simplified synthesis methods, which would boost the commercialization of organic solar cells (OSCs). Recently, a new small molecule acceptor (SMA) named Y6 was reported, yielding high‐performance OSCs. Herein, the Y6‐like A‐DA′D‐A framework is developed to A‐D‐A′‐D‐A‐type backbone adopted in constructing UFAs. Two new Y6‐like UFAs are synthesized within four steps and the effect of noncovalent atoms at the central electron‐deficient core on material properties and device performances is studied. It is found that the introduction of fluorine atoms can bring larger red‐shift in the absorption spectra and better aggregation of the resulting UFA film states compared with those of oxygen atoms. Interestingly, the variations in the noncovalent interaction atoms induce different intermolecular charge transfer between donors and UFAs. When blended with another economical donor, PTQ10, F substitution at the benzothiadiazole ring is more effective than O substitution, leading to the increased short‐circuit current density ( J SC ) and higher efficiency of over 12%, among the best performances of UFA‐based OSCs. This contribution demonstrates the appropriate introduction of noncovalent interaction is a promising method for tuning energy levels, absorption, and aggregation of UFAs for high‐performance OSCs.