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Wallace, J. Kent

Publications and source records attributed to Wallace, J. Kent.

At least 19 records

Going to Extremes: Architecting Holographic Microscopes for Extreme Environments

Bacterial life exists on earth in extreme environments. These are environments described by large temperature excur- sions, large pressure excursions, and large radiation excursions from the nominal conditions near sea level which are largely populated by humans. These extreme locales represent such places as the ocean ice, the briny pools of Death Valley and deep mines, the acidic hot springs of the High Sierra or Yellowstone, or even the clouds of our upper atmosphere. The preponderance of bacterial life in these extreme environments here on earth suggests that bacterial life might likely exist in the extreme environments of our own solar system, such as the icy moons of Europa or Enceladus. Thus, architecting instruments for detect- ing life in these extreme environments on earth builds confidence that we can architect such instruments for flight missions. In this paper, we discuss our experience with designing digital holo- graphic microscope instruments to enable detection of bacteria in several extreme environments. In particular we discuss three different instruments. The first is our field instrument which is a small, portable instrument for examination of remote sites. The second is submersible instrument which enables exploration of deep aquatic environments and is deployed on a ocean-going drone. The third is a balloon-borne instrument to examine the bacterial content of the upper atmosphere. We will provide a review of each instrument and discuss aspects of instrument engineering for each particular application.

Ramirez, Alex

Design and Performance of the PALM-3000 3.5 kHz Upgrade

PALM-3000 (P3K), the second-generation adaptive optics (AO) instrument for the 5.1 meter Hale telescope atPalomar Observatory, was released as a facility class instrument in October 2011 and has since been used on-skyfor over 600 nights as a workhorse science instrument and testbed for coronagraph and detector development.In late 2019 P3K underwent a significant upgrade to its wavefront sensor (WFS) arm and real-time control(RTC) system to reinforce its position as a state-of-the-art AO facility and extend its faint-end capability forhigh-resolution imaging and precision radial velocity follow-up of Kepler and TESS targets. The main featuresof this upgrade include an EM-CCD WFS camera capable of 3.5 kHz framerates, and an advanced Digital SignalProcessor (DSP) based RTC system to replace the aging GPU based system. Similar to the pre-upgrade system,the Shack-Hartmann wavefront sensor supports multiple pupil sampling modes using a motorized lenslet stage.The default sampling mode with 64×64 subapertures has been re-commissioned on-sky in late 2019, witha successful return to science observations in November 2019. In 64×mode the upgraded system is alreadyachieving K-band Strehl ratios up to 85% on-sky and can lock on natural guide stars as faint as mV=16. A16×16 subaperture mode is scheduled for on-sky commissioning in Fall 2020 and will extend the system’s faintlimit even further. Here we present the design and on-sky re-commissioning results of the upgraded system,dubbed P3K-II.

Vasisht, Gautam

Microscopic Object Classification through Passive Motion Observations with Holographic Microscopy

Digital holographic microscopy provides the ability to observe throughout a volume that is large compared to its resolution element without the need to refocus through the volume. This capability enables simultaneous observations of large numbers of small objects within such a volume. We have constructed a microscope that can observe a volume 0.4 x 0.4 x 1.0 µm with submicrometer resolution for observation of microorganisms and minerals in liquid environments in earth and on potential planetary missions. Because environmental samples are likely to contain mixtures of inorganics and microorganisms that are of comparable sizes near the resolution limit of the instrument, discrimination of living and non-living objects may be difficult. The motion of motile organisms can be used to readily distinguish them from non-motile objects (live or inorganic), but additional methods are required to distinguish non-motile organisms and inorganic objects that are of comparable size, but different composition and structure. In this paper we evaluate the use of passive motion to make this discrimination by evaluating diffusion and buoyancy characteristics of objects in the field of view.

Lindensmith, Christian

A multiwavelength digital holographic microscope architecture for enhancing life detection

Spectral properties of living organism can provide a discriminating method for characterization. However, digital holographic microscopy (DHM), a high-resolution, volumetric imaging technique that is well-suited for examining microbial species is typically monochromatic. Thus, the spectral properties of bacteria are not probed with DHM save only for the wavelength of operation. Here we describe a new DHM instrument which enhances the method via the simultaneous recording of wavelength multiplexed holograms of the sample. This coarse spectral encoding is akin to labeling with RGB values, thereby producing colorized images of the species which enables a new dimension of characterization. This new instrument is derived from a previous architecture which has already demonstrated superior opto/mechanical stability. Herein, this novel instrument is described, and the results of experimental measurements taken with this new instrument are shown.

Bedrossian, Manuel

CARBO - The Carbon Observatory Instrument Suite - The Next Generation of Earth Observing Instruments for Global Monitoring of Carbon Gases

The Carbon Observatory Instrument Suite, or CARBO, consists of four carbon observing instruments sharing a common instrument bus, yet targeted for a particular wavelength band each with a unique science observation. They are: a) Instrument 1, wavelength centered at 756 nm for oxygen and solar-induced chlorophyll fluorescence (SIF) observations, b) Instrument 2, centered at 1629 nm, for carbon dioxide (CO2) and methane (CH4) observation, c) Instrument 3, centered at 2062 nm for carbon dioxide and d) Instrument 4, centered at 2328 for carbon monoxide (CO) and methane. From low-Earth orbit, these instruments have a field-of-view of 10 to 15 degrees, and a spatial resolution of 2 km square. These instruments have a spectral resolving power ranging from ten to twenty thousand, and can monitor columnaverage dry air mole fraction of carbon dioxide (XCO2) at 1.5 ppm, and methane (XCH4) at 7 ppb. These new instruments will advance the use of immersion grating technology in spectrometer instruments in order to reduce the size of the instrument, while improving performance. These compact, capable instruments are envisioned to be compatible with small satellites, yet modular to be configured to address the particular science questions at hand. Here we report on the current status of the instrument design and fabrication, focusing primarily on Instruments 1 and 2. We will describe the key science and engineering requirements and the instrument performance error budget. We will discuss the optical design with particular emphasis on the immersion grating, and the advantages this new technology affords compared to previous instruments. We will also discuss the status of the focal plane array and the detector electronics and housing. Finally, we report on a new approach – developed during this instrument design process - which enables simultaneous measurement of both orthogonal polarization states (S and P) over the field-of-view and optical bandpass. We believe this polarization sensing capability will enable science observations which were previously limited by instrumental and observational degeneracies. In particular: improved sensitivity to all species, better sensitivity to surface polarization effects, better constraints on aerosol scattering parameters, and superior discrimination of the vertical distribution of gases and aerosols.

Bernas, Michael

GPI Spectra of HR8799 C, D, and E in H-K Bands with KLIP Forward Modeling

We demonstrate KLIP forward modeling spectral extraction on Gemini Planet Imager coronagraphic data of HR8799, using PyKLIP. We report new and re-reduced spectrophotometry of HR8799 c, d, and e from H-K bands. We discuss a strategy for choosing optimal KLIP PSF subtraction parameters by injecting fake sources and recovering them over a range of parameters. The K1/K2 spectra for planets c and d are similar to previously published results from the same dataset. We also present a K band spectrum of HR8799e for the first time and show that our H-band spectra agree well with previously published spectra from the VLT/SPHERE instrument. We compare planets c, d, and e with M, L, and T-type field objects. All objects are consistent with low gravity mid-to-late L dwarfs, however, a lack of standard spectra for low gravity late L-type objects lead to poor fit for gravity. We place our results in context of atmospheric models presented in previous publications and discuss differences in the spectra of the three planets.

planets and satellites: gaseous planets { stars: i

Zernike Wavefront Sensor (ZWFS) Development for Low Order Wavefront Sensing (LOWFS)

ZWFS is known to be photon noise optimal for measuring low order aberrations. Recently, ZWFS was selected as the baseline LOWFS technology on WFIRST for its sensitivity, accuracy, and its ease of integration with the starlight rejection mask. In this paper, we present the development of ZWFS sensor, including the algorithm description, sensitivity analysis, and some early experimental model validation results from a fabricated ZWFS phase mask on a stand-alone LOWFS testbed.

Zernike phase contrast

Multilayer Active Shell Mirrors for Space Telescopes

A novel active mirror technology based on carbon fiber reinforced polymer (CFRP) substrates and replication techniques has been developed. Multiple additional layers are implemented into the design serving various functions. Nanolaminate metal films are used to provide a high quality reflective front surface. A backing layer of thin active material is implemented to provide the surface-parallel actuation scheme. Printed electronics are used to create a custom electrode pattern and flexible routing layer. Mirrors of this design are thin (< 1.0 mm), lightweight (2.7 kg/m2 ), and have large actuation capabilities. These capabilities, along with the associated manufacturing processes, represent a significant change in design compared to traditional optics. Such mirrors could be used as lightweight primaries for small CubeSat-based telescopes or as meter-class segments for future large aperture observatories. Multiple mirrors can be produced under identical conditions enabling a substantial reduction in manufacturing cost and complexity. An overview of the mirror design and manufacturing processes is presented. Predictions on the actuation performance have been made through finite element simulations demonstrating correct abilities on the order of 250−300× for astigmatic modes with only 41 independent actuators. A description of the custom metrology system used to characterize the active mirrors is also presented. The system is based on a Reverse Hartmann test and can accommodate extremely large deviations in mirror figure (> 100 µm PV) down to sub-micron precision. The system has been validated against several traditional techniques including photogrammetry and interferometry. The mirror performance has been characterized using this system, as well as closed-loop figure correction experiments on 150 mm dia. prototypes. The mirrors have demonstrated post-correction figure accuracies of 200 nm RMS (two dead actuators limiting performance).

Reverse Hartmann