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Levine, Paul

Publications and source records attributed to Levine, Paul.

Enhanced Carbon Flux Response to Atmospheric Aridity and Water Storage Deficit During the 2015–2016 El Niño Compromised Carbon Balance Recovery in Tropical South America

During the 2015–2016 El Niño, the Amazon basin released almost one gigaton of carbon (GtC) into the atmosphere due to extreme temperatures and drought. The link between the drought impact and recovery of the total carbon pools and its biogeochemical drivers is still unknown. With satellite-constrained net carbon exchange and its component fluxes including gross primary production and fire emissions, we show that the total carbon loss caused by the 2015–2016 El Niño had not recovered by the end of 2018. Forest ecosystems over the Northeastern (NE) Amazon suffered a cumulative total carbon loss of ~0.6 GtC through December 2018, driven primarily by a suppression of photosynthesis whereas southeastern savannah carbon loss was driven in part by fire. We attribute the slow recovery to the unexpected large carbon loss caused by the severe atmospheric aridity coupled with a water storage deficit during drought. We show the attenuation of carbon uptake is three times higher than expected from the pre-drought sensitivity to atmospheric aridity and ground water supply. Our study fills an important knowledge gap in our understanding of the unexpectedly enhanced response of carbon fluxes to atmospheric aridity and water storage deficit and its impact on regional post-drought recovery as a function of the vegetation types and climate perturbations. Our results suggest that the disproportionate impact of water supply and demand could compromise resiliency of the Amazonian carbon balance to future increases in extreme events.

54 ENVIRONMENTAL SCIENCES↗

Congo Basin Water Balance and Terrestrial Fluxes Inferred From Satellite Observations of the Isotopic Composition of Water Vapor

Large spatio-temporal gradients in the Congo basin vegetation and rainfall are observed. However, its water-balance (evapotranspiration minus precipitation, or ET - P) is typically measured at basin-scales, limited primarily by river-discharge data, spatial resolution of terrestrial water storage measurements, and poorly constrained ET. We use observations of the isotopic composition of water vapor to quantify the spatio-temporal variability of net surface water fluxes across the Congo Basin between 2003 and 2018. These data are calibrated at basin scale using satellite gravity and total Congo river discharge measurements and then used to estimate time-varying ET - P over four quadrants representing the Congo Basin, providing first estimates of this kind for the region. We find that the multi-year record, seasonality, and interannual variability of ET - P from both the isotopes and the gravity/river discharge based estimates are consistent. Additionally, we use precipitation and gravity-based estimates with our water vapor isotope-based ET - P to calculate time and space averaged ET and net river discharge within the Congo Basin. These quadrant-scale moisture flux estimates indicate (a) substantial recycling of moisture in the Congo Basin (temporally and spatially averaged ET/P > 70%), consistent with models and visible light-based ET estimates, and (b) net river outflow is largest in the Western Congo where there are more rivers and higher flow rates. Our results confirm the importance of ET in modulating the Congo water cycle relative to other water sources.

54 ENVIRONMENTAL SCIENCES↗

Computational design of non-porous pH-responsive antibody nanoparticles

Abstract Programming protein nanomaterials to respond to changes in environmental conditions is a current challenge for protein design and is important for targeted delivery of biologics. Here we describe the design of octahedral non-porous nanoparticles with a targeting antibody on the two-fold symmetry axis, a designed trimer programmed to disassemble below a tunable pH transition point on the three-fold axis, and a designed tetramer on the four-fold symmetry axis. Designed non-covalent interfaces guide cooperative nanoparticle assembly from independently purified components, and a cryo-EM density map closely matches the computational design model. The designed nanoparticles can package protein and nucleic acid payloads, are endocytosed following antibody-mediated targeting of cell surface receptors, and undergo tunable pH-dependent disassembly at pH values ranging between 5.9 and 6.7. The ability to incorporate almost any antibody into a non-porous pH-dependent nanoparticle opens up new routes to antibody-directed targeted delivery.

Biochemistry & Molecular Biology↗

Design of amyloidogenic peptide traps

Segments of proteins with high β-strand propensity can self-associate to form amyloid fibrils implicated in many diseases. We describe a general approach to bind such segments in β-strand and β-hairpin conformations using de novo designed scaffolds that contain deep peptide-binding clefts. The designs bind their cognate peptides in vitro with nanomolar affinities. The crystal structure of a designed protein–peptide complex is close to the design model, and NMR characterization reveals how the peptide-binding cleft is protected in the apo state. We use the approach to design binders to the amyloid-forming proteins transthyretin, tau, serum amyloid A1 and amyloid β 1–42 (Aβ42). The Aβ binders block the assembly of Aβ fibrils as effectively as the most potent of the clinically tested antibodies to date and protect cells from toxic Aβ42 species.

59 BASIC BIOLOGICAL SCIENCES↗

Perspectives on Artificial Intelligence for Predictions in Ecohydrology

Abstract In November 2021, the Artificial Intelligence for Earth System Predictability (AI4ESP) workshop was held, which involved hundreds of researchers from dozens of institutions. There were 17 sessions held at the workshop, including one on ecohydrology. The ecohydrology session included various breakout rooms that addressed specific topics, including 1) soils and belowground areas; 2) watersheds; 3) hydrology; 4) ecophysiology and plant hydraulics; 5) ecology; 6) extremes, disturbance and fire, and land-use and land-cover change; and 7) uncertainty quantification methods and techniques. In this paper, we investigate and report on the potential application of artificial intelligence and machine learning in ecohydrology, highlight outcomes of the ecohydrology session at the AI4ESP workshop, and provide visionary perspectives for future research in this area.

54 ENVIRONMENTAL SCIENCES↗