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Kolb, Thomas

Publications and source records attributed to Kolb, Thomas.

Network of networks: Time series clustering of AmeriFlux sites

Environmental observation networks, such as AmeriFlux, are foundational for monitoring ecosystem response to climate change, management practices, and natural disturbances; however, their effectiveness depends on their representativeness for the regions or continents. We proposed an empirical, time series approach to quantify the similarity of ecosystem fluxes across AmeriFlux sites. We extracted the diel and seasonal characteristics (i.e., amplitudes, phases) from carbon dioxide, water vapor, energy, and momentum fluxes, which reflect the effects of climate, plant phenology, and ecophysiology on the observations, and explored the potential aggregations of AmeriFlux sites through hierarchical clustering. While net radiation and temperature showed latitudinal clustering as expected, flux variables revealed a more uneven clustering with many small (number of sites < 5), unique groups and a few large (> 100) to intermediate (15–70) groups, highlighting the significant ecological regulations of ecosystem fluxes. Many identified unique groups were from under-sampled ecoregions and biome types of the International Geosphere-Biosphere Programme (IGBP), with distinct flux dynamics compared to the rest of the network. At the finer spatial scale, local topography, disturbance, management, edaphic, and hydrological regimes further enlarge the difference in flux dynamics within the groups. Nonetheless, our clustering approach is a data-driven method to interpret the AmeriFlux network, informing future cross-site syntheses, upscaling, and model-data benchmarking research. Finally, we highlighted the unique and underrepresented sites in the AmeriFlux network, which were found mainly in Hawaii and Latin America, mountains, and at under-sampled IGBP types (e.g., urban, open water), motivating the incorporation of new/unregistered sites from these groups.

54 ENVIRONMENTAL SCIENCES↗

AmeriFlux FLUXNET-1F US-Fwf Flagstaff - Wildfire

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Fwf Flagstaff - Wildfire. This is the FLUXNET version of the carbon flux data for the site US-Fwf Flagstaff - Wildfire produced by applying the standard ONEFlux (1F) software. Site Description - Ponderosa pine forest subject to high severity stand replacing wild fire in 1996. Project webpage http://nau.edu/CEFNS/Forestry/Research/Carbon-Flux/Sites/.

Dore, Sabina↗

AmeriFlux FLUXNET-1F US-Fmf Flagstaff - Managed Forest

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Fmf Flagstaff - Managed Forest. This is the FLUXNET version of the carbon flux data for the site US-Fmf Flagstaff - Managed Forest produced by applying the standard ONEFlux (1F) software. Site Description - Ponderosa pine forest subject to thinning in September 2006. Project webpage http://nau.edu/CEFNS/Forestry/Research/Carbon-Flux/Sites/

Dore, Sabina↗

AmeriFlux FLUXNET-1F US-Fuf Flagstaff - Unmanaged Forest

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Fuf Flagstaff - Unmanaged Forest. This is the FLUXNET version of the carbon flux data for the site US-Fuf Flagstaff - Unmanaged Forest produced by applying the standard ONEFlux (1F) software. Site Description - Ponderosa pine forest not subject to disturbance in the last decades. Project webpage http://nau.edu/CEFNS/Forestry/Research/Carbon-Flux/Sites/.

Dore, Sabina↗

Coupling of Tree Growth and Photosynthetic Carbon Uptake Across Six North American Forests

Linking biometric measurements of stand-level biomass growth to tower-based measurements of carbon uptake—gross primary productivity and net ecosystem productivity—has been the focus of numerous ecosystem-level studies aimed to better understand the factors regulating carbon allocation to slow-turnover wood biomass pools. However, few of these studies have investigated the importance of previous year uptake to growth. We tested the relationship between wood biomass increment (WBI) and different temporal periods of carbon uptake from the current and previous years to investigate the potential lagged allocation of fixed carbon to growth among six mature, temperate forests. We found WBI was strongly correlated to carbon uptake across space (i.e., long-term averages at the different sites) but on annual timescales, WBI was much less related to carbon uptake, suggesting a temporal mismatch between C fixation and allocation to biomass. We detected lags in allocation of the previous year's carbon uptake to WBI at three of the six sites. Sites with higher annual WBI had overall stronger correlations to carbon uptake, with the strongest correlations to carbon uptake from the previous year. Only one site had WBI with strong positive relationships to current year uptake and not the previous year. Forests with low rates of WBI demonstrated weak correlations to carbon uptake from the previous year and stronger relationships to current year climate conditions. Our work shows an important, but not universal, role of lagged allocation of the previous year's carbon uptake to growth in temperate forests.

54 ENVIRONMENTAL SCIENCES↗

Optimizing Carbon Cycle Parameters Drastically Improves Terrestrial Biosphere Model Underestimates of Dryland Mean Net CO 2 Flux and its Inter-Annual Variability

Drylands occupy ~40% of the land surface and are thought to dominate global carbon (C) cycle inter-annual variability (IAV). Therefore, it is imperative that global terrestrial biosphere models (TBMs), which form the land component of IPCC earth system models, are able to accurately simulate dryland vegetation and biogeochemical processes. However, compared to more mesic ecosystems, TBMs have not been widely tested or optimized using in situ dryland CO 2 fluxes. Here, for this work, we address this gap using a Bayesian data assimilation system and 89 site-years of daily net ecosystem exchange (NEE) data from 12 southwest US Ameriflux sites to optimize the C cycle parameters of the ORCHIDEE TBM. The sites span high elevation forest ecosystems, which are a mean sink of C, and low elevation shrub and grass ecosystems that are either a mean C sink or “pivot” between an annual C sink and source. We find that using the default (prior) model parameters drastically underestimates both the mean annual NEE at the forested mean C sink sites and the NEE IAV across all sites. Our analysis demonstrated that optimizing phenology parameters are particularly useful in improving the model's ability to capture both the magnitude and sign of the NEE IAV. At the forest sites, optimizing C allocation, respiration, and biomass and soil C turnover parameters reduces the underestimate in simulated mean annual NEE. Our study demonstrates that all TBMs need to be calibrated for dryland ecosystems before they are used to determine dryland contributions to global C cycle variability and long-term carbon-climate feedbacks.

59 BASIC BIOLOGICAL SCIENCES↗