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Joiner, Joanna

Publications and source records attributed to Joiner, Joanna.

At least 19 records

Enhanced Carbon Flux Response to Atmospheric Aridity and Water Storage Deficit During the 2015–2016 El Niño Compromised Carbon Balance Recovery in Tropical South America

During the 2015–2016 El Niño, the Amazon basin released almost one gigaton of carbon (GtC) into the atmosphere due to extreme temperatures and drought. The link between the drought impact and recovery of the total carbon pools and its biogeochemical drivers is still unknown. With satellite-constrained net carbon exchange and its component fluxes including gross primary production and fire emissions, we show that the total carbon loss caused by the 2015–2016 El Niño had not recovered by the end of 2018. Forest ecosystems over the Northeastern (NE) Amazon suffered a cumulative total carbon loss of ~0.6 GtC through December 2018, driven primarily by a suppression of photosynthesis whereas southeastern savannah carbon loss was driven in part by fire. We attribute the slow recovery to the unexpected large carbon loss caused by the severe atmospheric aridity coupled with a water storage deficit during drought. We show the attenuation of carbon uptake is three times higher than expected from the pre-drought sensitivity to atmospheric aridity and ground water supply. Our study fills an important knowledge gap in our understanding of the unexpectedly enhanced response of carbon fluxes to atmospheric aridity and water storage deficit and its impact on regional post-drought recovery as a function of the vegetation types and climate perturbations. Our results suggest that the disproportionate impact of water supply and demand could compromise resiliency of the Amazonian carbon balance to future increases in extreme events.

54 ENVIRONMENTAL SCIENCES↗

High-resolution mapping of nitrogen oxide emissions in large US cities from TROPOMI retrievals of tropospheric nitrogen dioxide columns

Satellite-derived spatiotemporal patterns of nitrogen oxide (NOx) emissions can improve accuracy of emission inventories to better support air quality and climate research and policy studies. In this study, we develop a new method by coupling the chemical transport Model-Independent SATellite-derived Emission estimation Algorithm for Mixed-sources (MISATEAM) with a divergence method to map high-resolution NO x emissions across US cities using TROPOspheric Monitoring Instrument (TROPOMI) tropospheric nitrogen dioxide (NO 2 ) retrievals. The accuracy of the coupled method is validated through application to synthetic NO 2 observations from the NASA-Unified Weather Research and Forecasting (NU-WRF) model, with a horizontal spatial resolution of 4 km × 4 km for 33 large and mid-size US cities. Validation reveals excellent agreement between inferred and NU-WRF-provided emission magnitudes (R= 0.99, normalized mean bias, NMB = —0.01) and a consistent spatial pattern when comparing emissions for individual grid cells (R = 0.88 ± 0.06). We then develop a TROPOMI-based database reporting annual emissions for 39 US cities at a horizontal spatial resolution of 0.05° × 0.05° from 2018 to 2021. This database demonstrates a strong correlation (R= 0.90) with the National Emission Inventory (NEI) but reveals some bias (NMB = —0.24). There are noticeable differences in the spatial patterns of emissions in some cities. Our analysis suggests that uncertainties in TROPOMI-based emissions and potential misallocation of emissions and/or missing sources in bottom-up emission inventories both contribute to these differences.

54 ENVIRONMENTAL SCIENCES↗

From remotely-sensed solar-induced chlorophyll fluorescence to ecosystem structure, function, and service: Part II—Harnessing data

Although our observing capabilities of solar-induced chlorophyll fluorescence (SIF) have been growing rapidly, the quality and consistency of SIF datasets are still in an active stage of research and development. As a result, there are considerable inconsistencies among diverse SIF datasets at all scales and the widespread applications of them have led to contradictory findings. The present review is the second of the two companion reviews, and data oriented. It aims to (1) synthesize the variety, scale, and uncertainty of existing SIF datasets, (2) synthesize the diverse applications in the sector of ecology, agriculture, hydrology, climate, and socioeconomics, and (3) clarify how such data inconsistency superimposed with the theoretical complexities laid out in may impact process interpretation of various applications and contribute to inconsistent findings. We emphasize that accurate interpretation of the functional relationships between SIF and other ecological indicators is contingent upon complete understanding of SIF data quality and uncertainty. Additionally, biases and uncertainties in SIF observations can significantly confound interpretation of their relationships and how such relationships respond to environmental variations. Built upon our syntheses, we summarize existing gaps and uncertainties in current SIF observations. Further, we offer our perspectives on innovations needed to help improve informing ecosystem structure, function, and service under climate change, including enhancing in-situ SIF observing capability especially in “data desert” regions, improving cross-instrument data standardization and network coordination, and advancing applications by fully harnessing theory and data.

59 BASIC BIOLOGICAL SCIENCES↗

From remotely sensed solar-induced chlorophyll fluorescence to ecosystem structure, function, and service: Part I—Harnessing theory

Solar-induced chlorophyll fluorescence (SIF) is a remotely sensed optical signal emitted during the light reactions of photosynthesis. The past two decades have witnessed an explosion in availability of SIF data at increasingly higher spatial and temporal resolutions, sparking applications in diverse research sectors (e.g., ecology, agriculture, hydrology, climate, and socioeconomics). These applications must deal with complexities caused by tremendous variations in scale and the impacts of interacting and superimposing plant physiology and three-dimensional vegetation structure on the emission and scattering of SIF. At present, these complexities have not been overcome. To advance future research, the two companion reviews aim to (1) develop an analytical framework for inferring terrestrial vegetation structures and function that are tied to SIF emission, (2) synthesize progress and identify challenges in SIF research via the lens of multi-sector applications, and (3) map out actionable solutions to tackle these challenges and offer our vision for research priorities over the next 5-10 years based on the proposed analytical framework. This paper is the first of the two companion reviews, and theory oriented. It introduces a theoretically rigorous yet practically applicable analytical framework. Guided by this framework, we offer theoretical perspectives on three overarching questions: (1) The forward (mechanism) question—How are the dynamics of SIF affected by terrestrial ecosystem structure and function? (2) The inference question: What aspects of terrestrial ecosystem structure, function, and service can be reliably inferred from remotely sensed SIF and how? (3) The innovation question: What innovations are needed to realize the full potential of SIF remote sensing for real-world applications under climate change? In conclusion, the analytical framework elucidates that process complexity must be appreciated in inferring ecosystem structure and function from the observed SIF; this framework can serve as a diagnosis and inference tool for versatile applications across diverse spatial and temporal scales.

59 BASIC BIOLOGICAL SCIENCES↗

A new method for inferring city emissions and lifetimes of nitrogen oxides from high-resolution nitrogen dioxide observations: a model study

We present a new method to infer emissions and lifetimes of nitrogen oxides (NO x ) based on tropospheric nitrogen dioxide (NO 2 ) observations together with reanalysis wind fields for cities located in polluted backgrounds. Since the accuracy of the method is difficult to assess due to lack of “true values” that can be used as a benchmark, we apply the method to synthetic NO 2 observations derived from the NASA-Unified Weather Research and Forecasting (NU-WRF) model at a high horizontal spatial resolution of 4 km × 4 km for cities over the continental United States. We compare the inferred emissions and lifetimes with the values given by the NU-WRF model to evaluate the method. The method is applicable to 26 US cities. The derived results are generally in good agreement with the values given by the model, with the relative differences of 2 % ± 17 % (mean ± standard deviation) and 15 % ± 25 % for lifetimes and emissions, respectively. Our investigation suggests that the use of wind data prior to the satellite overpass time improves the performance of the method. The correlation coefficients between inferred and NU-WRF lifetimes increase from 0.56 to 0.79 and for emissions increase from 0.88 to 0.96 when comparing results based on wind fields sampled simultaneously with satellite observations and averaged over 9 h data prior to satellite observations, respectively. We estimate that uncertainties in NO x lifetime and emissions arising from the method are approximately 15 % and 20 %, respectively, for typical (US) cities. The total uncertainties reach up to 43% (lifetimes) and 45% (emissions) by considering the additional uncertainties associated with satellite NO 2 observations and wind data. We expect this new method to be applicable to NO 2 observations from the TROPOspheric Monitoring Instrument (TROPOMI) and geostationary satellites, such as Geostationary Environment Monitoring Spectrometer (GEMS) or the Tropospheric Emissions: Monitoring Pollution (TEMPO) instrument, to estimate urban NO x emissions and lifetimes globally.

54 ENVIRONMENTAL SCIENCES↗

High-Resolution Mapping of SO2 Using Airborne Observations from the GeoTASO Instrument During the KORUS-AQ Field Study: PCA-Based Vertical Column Retrievals

The Geostationary Trace gas and Aerosol Sensor Optimization (GeoTASO) instrument is an airborne hyperspectral spectrometer measuring backscattered solar radiation in the ultraviolet (290–400 nm) and visible (415–695 nm) wavelength regions. This paper presents high-resolution sulfur dioxide (SO2) maps over the Korean Peninsula, produced by SO2 retrievals from GeoTASO measurements during the Korea–United States Air Quality Field Study (KORUS-AQ) from May to June 2016. The highly sensitive GeoTASO instrument with a spatial resolution of ~250 m × 250 m can detect point emission sources of SO2 within its fields of view, even without merging multiple overlapping observations. To retrieve SO2 vertical columns from the GeoTASO measurements, we apply an algorithm based on principal component analysis (PCA), which is effective in suppressing noise and biases in SO2 retrievals. The retrievals successfully capture SO2 plumes and various point sources such as power plants, a petrochemical complex, and a steel mill, located in South Chungcheong Province, some of which are not detected by a ground-based in situ measurement network. Spatial distributions of SO2 from GeoTASO observations in source areas are consistent with those from the Stack Tele-Monitoring System reports and airborne in situ SO2 measurements. Comparisons of SO2 retrievals from GeoTASO and existing satellite sensors demonstrate the significance of high-resolution SO2 observations, by indicating that GeoTASO detects small SO2 emission sources that are not precisely resolved by single overpasses of satellites. To assess future geostationary SO2 observations having a higher spatial resolution, we upscale the GeoTASO SO2 retrievals to a spatial resolution of the Geostationary Environment Monitoring Spectrometer (GEMS). Since the upscaled GeoTASO retrievals also detect SO2 plumes clearly, we expect from GEMS to identify even small SO2 emission sources over Asia.

Chong, Heesung↗

Dynamical Forecasts of Tropical Terrestrial Carbon Fluxes with the NASA S2S Retrospective Forecast System

Recent advances in the ability to predict climate anomalies at sub-seasonal to seasonal (S2S) timescales allow us to explore the possibility of forecasting carbon flux anomalies. Although carbon flux forecasting is a relatively new concept, it is potentially beneficial as it can help us better understand global and regional land-atmosphere carbon feedbacks associated with climate variations and can provide guidance for future field mission design. Here we evaluate the skill of forecasted terrestrial carbon anomalies generated from meteorological anomalies produced with the NASA Global Modeling and Assimilation Office (GMAO) S2S forecast system. We focus here on three representative time periods (the most recent 2015-2016 El Nino, 2011 La Nina, and 2014 as a neutral year), with each corresponding 9-month forecast comprising four ensemble members initialized in the preceding December. The meteorological variables produced by the GMAO forecast system were bias-corrected using a climatology derived from the Modern Era Retrospective analysis for Research and Applications, version 2 (MERRA-2) before being used to drive a suite of offline simulations with the NASA Catchment-CN terrestrial biosphere model, a model that computes water-energy-carbon dynamics. Forecasts are evaluated by comparing against satellite-driven estimates of gross primary production (GPP) and inverse model estimates of net carbon flux that incorporate satellite carbon dioxide measurements. We find that the restrospectively predicted carbon fluxes in the tropics reasonably reproduce the signs and magnitudes of the observed anomalies between the 2015-2016 El Nino and the 2011 La Nina for both net flux and GPP. For instance, for the El Nino period, the magnitude of the forecasted negative GPP anomaly in the South American tropics (which undergoes anomalously warm and dry conditions) agrees with the observed GPP anomaly at leads of up to three or four months. Overall, this study demonstrates potential skill in the forecast of biospheric carbon fluxes a few months in advance, a capability that could contribute to attribution studies focusing on carbon flux variations and support innovative observation strategies in the future.

Lee, Eunjee↗

Widespread Increase of Boreal Summer Dry Season Length Over the Congo Rainforest

Dry season length strongly influences tropical rainforest vegetation and is largely determined by precipitation patterns. Over the Amazon, the dry season length has increased since 1979 and severe short-term droughts have occurred. However, similar changes have not been investigated for the world’s second largest rainforest, the Congo Basin, where long-term drying and large-scale declines in forest greenness and canopy water content were reported. Here we present observational evidence for widespread increases in the boreal summer (June–August) dry season length over the Congo Basin since the 1980s, from both hydrological and ecological perspectives. We analyzed both dry season onset and dry season end via multiple independent precipitation and satellite derived vegetation datasets for the period 1979–2015. The dry season length increased by 6.4–10.4 days per decade in the period 1988–2013, primarily attributed to an earlier dry season onset and a delayed dry season end. The earlier dry season onset was caused by long-term droughts due to decreased rainfall in the pre-dry season (April–June). The delayed dry season end resulted from insufficiently replenished soil moisture, which postpones the start of the next wet season and hinders vegetation regrowth. If such changes continue, the enhanced water stress in a warming climate may affect the carbon cycle and alter the composition and structure of evergreen rainforest.

Congo rainforest growing season NDVI SIF↗

Investigation of NO2 Measurements Made During DISCOVER-AQ and KORUS-AQ Campaigns in Conjunction with NO2 Tropospheric Column from the Ozone Monitoring Instrument (OMI) and High-Resolution Community Multi-Scale Air Quality (CMAQ) Model Simulation

Atmospheric NO2 is produced by combustion, lightning, and in soil. NO2 affects ozone production and criteria pollutant itself.It also has indirect radiative impacts in the troposphere, since ozone has largest warming effect in upper troposphere. Tropospheric vertical column densities (VCD) of NO2 are available from satellites (GOME, OMI, SCIAMACHY, GOME-2). DISCOVER-AQ and KORUS-AQ aircraft campaigns we reconducted to improve the use of satellites to monitor air quality for public health and environmental benefit in United States and South Korea. In this study, we investigate 1) How do these measurements compare? 2) What is the best way to make comparisons of space- and ground-based measurements?

multi-scale air quality↗

Nitrogen Oxides in the Global Upper Troposphere: Interpreting Cloud-Sliced NO2 Observations from the OMI Satellite Instrument

Nitrogen oxides (NOx≡NO+NO2) in the upper troposphere (UT) have a large impact on global tropospheric ozone and OH (the main atmospheric oxidant). New cloud-sliced observations of UT NO2 at 450–280 hPa (∼6–9 km) from the Ozone Monitoring Instrument (OMI) produced by NASA and the Royal Netherlands Meteorological Institute (KNMI) provide global coverage to test our understanding of the factors controlling UT NOx. We find that these products offer useful information when averaged over coarse scales (20°×32°, seasonal), and that the NASA product is more consistent with aircraft observations of UT NO2. Correlation with Lightning Imaging Sensor (LIS) and Optical Transient Detector (OTD) satellite observations of lightning flash frequencies suggests that lightning is the dominant source of NOx to the upper troposphere except for extratropical latitudes in winter. The NO2 background in the absence of lightning is 10–20 pptv. We infer a global mean NOx yield of 280±80 moles per lightning flash, with no significant difference between the tropics and midlatitudes, and a global lightning NOx source of 5.9±1.7 Tg N a(exp −1). There is indication that the NOx yield per flash increases with lightning flash footprint and with flash energy.

Marais, Eloise A.↗

A New Global Anthropogenic SO2 Emission Inventory for the Last Decade: A Mosaic of Satellite-Derived and Bottom-Up Emissions

Sulfur dioxide (SO2) measurements from the Ozone Monitoring Instrument (OMI) satellite sensor have been used to detect emissions from large point sources. Emissions from over 400 sources have been quantified individually based on OMI observations, accounting for about a half of total reported anthropogenic SO2 emissions. Here we report a newly developed emission inventory, OMI-HTAP, by combining these OMI-based emission estimates and the conventional bottom-up inventory, HTAP, for smaller sources that OMI is not able to detect. OMI-HTAP includes emissions from OMI-detected sources that are not captured in previous leading bottom-up inventories, enabling more accurate emission estimates for regions with such missing sources. In addition, our approach offers the possibility of rapid updates to emissions from large point sources that can be detected by satellites. Our methodology applied to OMI-HTAP can also be used to merge improved satellite-derived estimates with other multi-year bottom-up inventories, which may further improve the accuracy of the emission trends. OMI-HTAP SO2 emissions estimates for Persian Gulf, Mexico, and Russia are 59%, 65%, and 56% larger than HTAP estimates, respectively, in year 2010. We have evaluated the OMI-HTAP inventory by performing simulations with the Goddard Earth Observing System version 5 (GEOS-5) model. The GEOS-5 simulated SO2 concentrations driven by both HTAP and OMI-HTAP were compared against in situ measurements. We focus for the validation on year 2010 for which HTAP is most valid and for which a relatively large number of in situ measurements are available. Results show that the OMI-HTAP inventory improves the agreement between the model and observations, in particular over the US, with the normalized mean bias decreasing from 0.41 (HTAP) to -0.03 (OMI-HTAP) for year 2010. Simulations with the OMI-HTAP inventory capture the worldwide major trends of large anthropogenic SO2 emissions that are observed with OMI. Correlation coefficients of the observed and modelled surface SO2 in 2014 increase from 0.16 (HTAP) to 0.59 (OMI-HTAP) and the normalized mean bias dropped from 0.29 (HTAP) to 0.05 (OMI-HTAP), when we updated 2010 HTAP emissions with 2014 OMI-HTAP emissions in the model.

Sulfur dioxide (SO2)↗

A Global Spatially Contiguous Solar-Induced Fluorescence (CSIF) Dataset Using Neural Networks

Satellite-retrieved solar-induced chlorophyll fluorescence (SIF) has shown great potential to monitor the photosynthetic activity of terrestrial ecosystems. However, several issues, including low spatial and temporal resolution of the gridded datasets and high uncertainty of the individual retrievals, limit the applications of SIF. In addition, inconsistency in measurement footprints also hinders the direct comparison between gross primary production (GPP) from eddy covariance (EC) flux towers and satellite-retrieved SIF. In this study, by training a neural network (NN) with surface reflectance from the MODerate-resolution Imaging Spectroradiometer (MODIS) and SIF from Orbiting Carbon Observatory-2 (OCO-2), we generated two global spatially contiguous SIF (CSIF) datasets at moderate spatiotemporal (0.05° 4-day) resolutions during the MODIS era, one for clear-sky conditions (2000–2017) and the other one in all-sky conditions (2000–2016). The clear-sky instantaneous CSIF (CSIF(sub clear-inst)) shows high accuracy against the clear-sky OCO-2 SIF and little bias across biome types. The all-sky daily average CSIF (CSIF(sub all-daily)) dataset exhibits strong spatial, seasonal and interannual dynamics that are consistent with daily SIF from OCO-2 and the Global Ozone Monitoring Experiment-2 (GOME-2). An increasing trend (0.39 %) of annual average CSIFall-daily is also found, confirming the greening of Earth in most regions. Since the difference between satellite-observed SIF and CSIF is mostly caused by the environmental down-regulation on SIF(sub yield), the ratio between OCO-2 SIF and CSIF(sub clear-inst) can be an effective indicator of drought stress that is more sensitive than the normalized difference vegetation index and enhanced vegetation index. By comparing CSIF(sub all-daily) with GPP estimates from 40 EC flux towers across the globe, we find a large cross-site variation (c.v. = 0.36) of the GPP–SIF relationship with the highest regression slopes for evergreen needleleaf forest. However, the cross-biome variation is relatively limited (c.v. = 0.15). These two contiguous SIF datasets and the derived GPP–SIF relationship enable a better understanding of the spatial and temporal variations of the GPP across biomes and climate.

Zhang, Yao↗

Estimation of Terrestrial Global Gross Primary Production (GPP) with Satellite Data-Driven Models and Eddy Covariance Flux Data

We estimate global terrestrial gross primary production (GPP) based on models that use satellite data within a simplified light-use efficiency framework that does not rely upon other meteorological inputs. Satellite-based geometry-adjusted reflectances are from the MODerate-resolution Imaging Spectroradiometer (MODIS) and provide information about vegetation structure and chlorophyll content at both high temporal (daily to monthly) and spatial (1 km) resolution. We use satellite-derived solar-induced fluorescence (SIF) to identify regions of high productivity crops and also evaluate the use of downscaled SIF to estimate GPP. We calibrate a set of our satellite-based models with GPP estimates from a subset of distributed eddy covariance flux towers (FLUXNET 2015). The results of the trained models are evaluated using an independent subset of FLUXNET 2015 GPP data. We show that variations in light-use efficiency (LUE) with incident PAR are important and can be easily incorporated into the models. Unlike many LUE-based models, our satellite-based GPP estimates do not use an explicit parameterization of LUE that reduces its value from the potential maximum under limiting conditions such as temperature and water stress. Even without the parameterized downward regulation, our simplified models are shown to perform as well as or better than state-of-the-art satellite data-driven products that incorporate such parameterizations. A significant fraction of both spatial and temporal variability in GPP across plant functional types can be accounted for using our satellite-based models. Our results provide an annual GPP value of 140 Pg C year 1 for 2007 that is within the range of a compilation of observation-based, model, and hybrid results, but is higher than some previous satellite observation-based estimates

CO2↗

A Cloud Algorithm Based on the O2-O2 477 nm Absorption Band Featuring an Advanced Spectral Fitting Method and the Use of Surface Geometry-Dependent Lambertian-Equivalent Reflectivity

We discuss a new cloud algorithm that retrieves an effective cloud pressure, also known as cloud optical centroid pressure (OCP), from oxygen dimer (O2-O2) absorption at 477nm after determining an effective cloud fraction (ECF) at 466nm, a wavelength not significantly affected by trace-gas absorption and rotational Raman scattering. The retrieved cloud products are intended for use as inputs to the operational nitrogen dioxide (NO2) retrieval algorithm for the Ozone Monitoring Instrument (OMI) flying on the Aura satellite. The cloud algorithm uses temperature-dependent O2-O2 cross sections and incorporates flexible spectral fitting techniques that account for specifics of the surface reflectivity. The fitting procedure derives O2-O2 slant column densities (SCDs) from radiances after O3, NO2, and H2O absorption features have been removed based on estimates of the amounts of these species from independent OMI algorithms. The cloud algorithm is based on the frequently used mixed Lambertian-equivalent reflectivity (MLER) concept. A geometry-dependent Lambertian-equivalent reflectivity (GLER), which is a proxy of surface bidirectional reflectance, is used for the ground reflectivity in our implementation of the MLER approach. The OCP is derived from a match of the measured O2-O2 SCD to that calculated with the MLER method. Temperature profiles needed for computation of vertical column densities are taken from the Global Modeling Initiative (GMI) model. We investigate the effect of using GLER instead of climatological LER on the retrieved ECF and OCP. For evaluation purposes, the retrieved ECFs and OCPs are compared with those from the operational OMI cloud product, which is also based on the same O2-O2 absorption band. Impacts of the application of the newly developed cloud algorithm to the OMI NO2 retrieval are discussed.

cloud fraction and pressure↗