Engineering topics

Fonda, Mark

Publications and source records attributed to Fonda, Mark.

34 records · Page 2

NASA NTRS2002

Estimated Optical Constants of Tagish Lake Meteorite

The visible, near-infrared, and mid-infrared (0.3-25 micron) real and imaginary indices of refraction are derived from reflectance measurements of the Tagish Lake meteorite. These are compared to some real and imaginary indices of refraction of the individual minerals composing the Tagish Lake meteorite. From this comparison it is clear that the imaginary indices of several individual minerals contribute to the estimated imaginary index of the Tagish Lake.

Roush, Ted L.↗

NASA NTRS2002

Kepler Mission: A Search for Habitable Planets

The Kepler Mission was selected by NASA as one of the next two Discovery Missions. The mission design is based on the search for Earth-size planets in the habitable zone of solar-like stars, but does not preclude the discovery of larger or smaller planets in other orbits of non-solar-like stars. An overview of the mission, the scientific goals and the anticipated results will be presented.

Koch, David↗

NASA NTRS2002

Long Term Manipulations of Intact Microbial Mat Communities in a Greenhouse Collaboratory: Simulating Earth's Present and Past Field Environments

Photosynthetic microbial mat communities were obtained from marine hypersaline saltern ponds, maintained in a greenhouse facility, and examined for the effects of salinity variations. Because these microbial mats are considered to be useful analogs of equivalent ancient marine communities, they offer insights about evolutionary events during the greater than 3 billion year time interval wherein mats co-evolved with Earth's geosphere and atmosphere. Although photosynthetic mats can be highly dynamic and exhibit extremely high activity, the mats in the present study have been maintained for more than one year with relatively minor changes. The major groups of microorganisms, as assayed using microscopic, genetic, and biomarker methodologies, are essentially the same as those in the original field samples. Field and greenhouse mats were similar with respect to rates of exchange of oxygen and dissolved inorganic carbon across the mat-water interface, both during the day and at night. Field and greenhouse mats exhibited similar rates of efflux of methane and hydrogen. Manipulations of salinity in the water overlying the mats produced changes in the community that strongly resemble those observed in the field. A collaboratory testbed and an array of automated features are being developed to support remote scientific experimentation with the assistance of intelligent software agents. This facility will permit teams of investigators to explore ancient environmental conditions that are rare or absent today but might have influenced the early evolution of these photosynthetic ecosystems.

Bebout, Brad↗

NASA NTRS2002

Protein Kinase Classification with 2866 Hidden Markov Models and One Support Vector Machine

The main application considered in this paper is predicting true kinases from randomly permuted kinases that share the same length and amino acid distributions as the true kinases. Numerous methods already exist for this classification task, such as HMMs, motif-matchers, and sequence comparison algorithms. We build on some of these efforts by creating a vector from the output of thousands of structurally based HMMs, created offline with Pfam-A seed alignments using SAM-T99, which then must be combined into an overall classification for the protein. Then we use a Support Vector Machine for classifying this large ensemble Pfam-Vector, with a polynomial and chisquared kernel. In particular, the chi-squared kernel SVM performs better than the HMMs and better than the BLAST pairwise comparisons, when predicting true from false kinases in some respects, but no one algorithm is best for all purposes or in all instances so we consider the particular strengths and weaknesses of each.

Weber, Ryan↗

NASA NTRS2002

Noachian Martian Volcanics a Water Source

H2O was supplied to the Noachian atmosphere by eruptions, or in association with large impacts. Most water outgassed into an extremely cold atmosphere, and condensate deposits were inevitable. High heat flow could lead to subglacial melting only if ice thicknesses were greater than 500-1000m, which is extremely unlikely. Subareal melting and flow is contingent upon temperatures periodically exceeding 273 K, and retarding evaporative loss of the flow. In still air, evaporation into a dry atmosphere is in the free convection regime, and a stream with 2 cu m/s discharge, flowing 1 m/s could persist for hundreds of days and cover distances greater than any valley reach. The zero-wind-shear condition is considered implausible however. We investigate the possibility that evaporation rates were suppressed because the atmosphere was regionally charged with H2O as it moved over snow/ice fields. Our initial concern is precipitation from volcanic plumes. A Kilauea-style eruption on the martian surface would cover a 10km circular deposit with 10cm of H2O, if all H2O could be precipitated near the vent. The characteristics of the eruption at the vent, (vent size, temperature, H2O content, etc.) are independent of the environmental conditions. The subsequent behavior of the plume, including precipitation of ash and H2O condensate depends strongly on the environment. Hence, the proximal fate of volcanic H2O is amenable to treatment in a model. A simple bulk thermodynamic model of the rise of an H2O plume through a stably stratified CO2 atmosphere, with only adiabatic cooling, produces runaway plume rise. A more complex treatment includes the effects of latent heat release, wind shear along the plume, divergence of ash and H2O, and will yield more realistic estimates of H2O transport in eruptive plumes. Results of these simulations will be presented.

Zent, A. P.↗

NASA NTRS2002

The Pascal Mars Scout Mission

Except for Earth, Mars is the planet most amenable to surface-based climate studies. Its surface is accessible, and the kind of observations that are needed, such as meteorological measurements from a long-lived global network, are readily achievable. Weather controls the movement of dust, the exchange of water between the surface and atmosphere, and the cycling of CO2 between the poles. We know there is a weather signal, we know how to measure it, and we know how to interpret it. Pascal seeks to understand the long-term global behavior of near-surface weather systems on Mars, how they interact with its surface, and, therefore, how they control its climate system. To achieve this, Pascal delivers 18 Science Stations to the surface of the planet that operate for three Mars years (5.6 Earth years). The network has stations operating in the tropics, midlatitudes, and polar regions of both hemispheres. During entry, descent, and landing, each Pascal probe acquires deceleration measurements to determine thermal structure, and descent images to characterize local terrain. On the surface, each Science Station takes daily measurements of pressure, opacity, temperature, wind speed, and water vapor concentration and monthly panoramic images of the landing environment. These data will characterize the planet's climate system and how atmosphere-surface interactions control it. The Pascal mission is named after 17th century French Scientist, Blaise Pascal, who pioneered measurements of atmospheric pressure. Pressure is the most critical measurement because it records the "heartbeat" of the planet's general circulation and climate system.

Haberle, R. M.↗

NASA NTRS2001

Star Formation in the Galaxy and the Fluctuating UV Radiation Field

We examine the formation of massive stars in the Galaxy, the resultant fluctuating UV radiation field, and the effect of this field on the star-forming interstellar medium (ISM). There are substantial fluctuations of the UV radiation field in space (scales of 100's of parsecs) and time (time-scales of order 100 million years) at the solar circle. The Far Ultraviolet (FUV) (6 eV< hv < 13.6 eV) field and the pressure determines whether the thermal balance of the neutral gas results in cold clouds or warm (T - 10(exp 4) neutral medium. We show how to calculate the average fractions of the gas in the cold and warm phases when the interstellar gas is subject to this fluctuating FUV field. The knowledge of how these fractions depend on the gas properties and on the FUV sources is a basic step in building a model of the large scale behavior of the ISM and the mutual relation between the ISM and the star formation rate. Application is made to observations of spiral galaxies which correlate the star formation rate per unit area with the surface density of the gas. We acknowledge support from the NASA Astrophysical Theory program.

Hollenbach, David↗

NASA NTRS2001

Chemical Constraints Governing the Origin of Metabolism: The Thermodynamic Landscape of Carbon Group Transformations

The thermodynamics of organic chemistry under mild aqueous conditions was examined in order to begin to understand its influence on the structure and operation of metabolism and its antecedents. Free energies were estimated for four types reactions of biochemical importance carbon-carbon bond cleavage and synthesis, hydrogen transfer between carbon groups, dehydration of alcohol groups, and aldo-keto isomerization. The energies were calculated for mainly aliphatic groups composed of carbon, hydrogen, and oxygen. The energy values showed that (1) when carbon-carbon bond cleavage involves two different types of functional groups, transfer of the shared electron-pair to the more reduced carbon group is energetically favored over transfer to the more oxidized carbon group, and (2) the energy of carbon-carbon bond transformation is strongly dependent on the type of functional group that donates the shared electron-pair during cleavage, and the group that accepts the shared electron-pair during synthesis, and (3) the energetics of C-C bond transformation is determined primarily by the half-reaction energies of the couples: carbonyl/carboxylic acid, carboxylic acid/carbon dioxide, alcohol/carbonyl, and hydrocarbon/alcohol. The energy of hydrogen-transfer between carbon groups was found to depend on the functional group class of both the hydrogen-donor and hydrogen-acceptor. From these and other observations we concluded that the chemistry of the origin of metabolism (and to a lesser degree modem metabolism) is strongly constrained by the (1) limited disproportionation energy of organic substrates that can be dissipated in a few irreversible reactions, (2) the energy-dominance of few half-reaction couples in carbon-carbon bond transformation that establishes whether a chemical reaction is energetically irreversible, reversible or unfeasible, and (3) the dependence of the transformation-energy on the oxidation state of carbon groups (functional group type) which is contingent on prior reactions in the synthetic pathway.

Weber, Arthur L.↗

NASA NTRS2001

The Role of Cyanobacteria in Stromatolite Morphogenesis, Highborn Cay Bahamas: An Integrated Field and Laboratory Simulation Study

Geomicrobiological phenomena are among the most fundamental of interactions between Earth and its biosphere. Actively growing and lithifying stromatolites at Highborne Cay Bahamas, have recently been documented and allow for detailed examination of the roles microbes play in the mineralization process. These stromatolites contain a variety of complex microbial communities with distinct distribution patterns for different microbial groups. Cyanobacteria are the primary producers in this system providing energy, directly or indirectly, for the entire stromatolite microbial community. They also play key roles in the trapping and binding of sediments. Most of these species are highly motile and can adjust their position and orientation within the sediment matrix in order to optimize their access to irradiance and nutrients. As individual species have different physical and metabolic properties, this motility generally results in segregated distributions of species, which in turn contributes to the laminated textures observed in these actively forming stromatolites. Increasingly our studies suggest that the activities and locations of various cyanobacterial species also contribute greatly to the localization of new mineral precipitation through a variety of processes. We are investigating these contributions using an integrated approach combining detailed observations of field samples with manipulative experiments using both field samples and cultures of specific organisms isolated from these stromatolites. Experiments are conducted both in standard laboratory conditions and in outdoor running seawater flumes. A variety of standard techniques; SEM (scanning electron microscopy), petrographic analyses, TEM (transmission electron microscopy), are used to compare mineralization processes in field samples with those generated in laboratory-flume simulations. Using this approach we are able to more thoroughly investigate the effects of irradiance, CaCO3 saturation, and hydrodynamic regime on cyanobacterial distribution, trapping and binding and mineral precipitation. Simulation results will be presented and compared with community and mineralization distribution patterns seen in the field samples from which these communities were isolated.

Prufert-Bebout, Leslie↗

NASA NTRS2001

Low Temperature Reflectance Spectra of Titan Tholins

Compositional interpretation of remotely obtained reflectance spectra of outer solar system surfaces is achieved by a variety of methods. These include matching spectral curves, matching spectral features, quantitative spectral interpretation, and theoretical modeling of spectra. All of these approaches rely upon laboratory measurements of one kind or another. The bulk of these laboratory measurements are obtained with the sample of interest at ambient temperatures and pressures. However, surface temperatures of planets, satellites, and asteroids in the outer solar system are significantly cooler than ambient laboratory conditions on Earth. The infrared spectra of many materials change as a function of temperature. As has been recently demonstrated it is important to assess what effects colder temperatures have on spectral properties and hence, compositional interpretations. Titan tholin is a solid residue created by energetic processing of H-, C-, and N-bearing gases. Such residues can also be created by energetic processing if the gases are condensed into ices. Titan tholin has been suggested as a coloring agent for several surfaces in the outer solar system. Here we report laboratory measurements of Titan tholin at a temperature of 100 K and compare these to measurements of the same sample near room temperature. At low temperature the absorption features beyond 1 micrometer narrow slightly. At wavelengths greater than approx. 0.8 micrometer the overall reflectance of the sample decreases slightly making the sample less red at low temperatures. We will discuss the implications of the laboratory measurements for interpretation of cold outer solar system surfaces.

Roush, T. L.↗

NASA NTRS2000

The 1999 Leonid Multi-Instrument Aircraft Campaign - An Early Review

The Leonid meteor storm of 1999 was observed from two B707-type research aircraft by a team of 35 scientists of seven nationalities over the Mediterranean Sea on Nov. 18, 1999. The mission was sponsored by various science programs of NASA, and offered the best possible observing conditions, free of clouds and at a prime location for viewing the storm. The 1999 mission followed a similar effort in 1998, improving upon mission strategy and scope. As before, spectroscopic and imaging experiments targeted meteors and persistent trains, but also airglow, aurora, elves and sprites. The research aimed to address outstanding questions in Planetary Science, Astronomy, Astrobiology and upper atmospheric research, including Aeronornie. In addition, near real-time flux measurements contributed to a USAF sponsored program for space weather awareness. An overview of the first results is given, which are discussed in preparation for future missions.

Jenniskens, Peter↗

NASA NTRS2000

Meteors: A Delivery Mechanism of Organic Matter to The Early Earth

All potential exogenous pre-biotic matter arrived to Earth by ways of our atmosphere, where much material was ablated during a luminous phase called 1. meteors" in rarefied flows of high (up to 270) Mach number. The recent Leonid showers offered a first glimpse into the elusive physical conditions of the ablation process and atmospheric chemistry associated with high-speed meteors. Molecular emissions were detected that trace a meteor's brilliant light to a 4,300 K warm wake rather than to the meteor's head. A new theoretical approach using the direct simulation by Monte Carlo technique identified the source-region and demonstrated that the ablation process is critical in the heating of the meteor's wake. In the head of the meteor, organic carbon appears to survive flash heating and rapid cooling. The temperatures in the wake of the meteor are just right for dissociation of CO and the formation of more complex organic compounds. The resulting materials could account for the bulk of pre-biotic organic carbon on the early Earth at the time of the origin of life.

Jenniskens, Peter↗

NASA NTRS1998

Sources of Hydrogen as Food for Deep Microbial Communities

To survive in deep subsurface environments autolithotrophic microbial communities require a sustainable food supply. One possible source is H2 which forms when H2O reacts with ferrous iron at rock surfaces or mineral grain boundaries to produce H2 plus ferric iron. The amount of H2 that can be supplied in this way, however, is relatively small and may not last for more than a few hundred or thousand years. A much larger reservoir of H2 exists in the rocks, inside mineral grains, arising from an as yet little-known redox conversion that affects OH- in nominally anhydrous minerals. These OH- represent small amounts of "water" that become incorporated during crystallization in H2O-laden environments. A corollary of the H2 formation from OH- is the formation of peroxy, an oxidized form of oxygen. While the peroxy become part of the mineral structure, the H2 molecules are diffusively mobile and can escape from within the mineral grains, entering the intergranular space. Assuming cautiously realistic number densities of OH- undergoing the in situ redox conversion to H2 plus peroxy, a 10 km deep rock column is expected to contain enough H2 to allow for a constant degassing rate of 50-100 nmole H2 per day per sq cm over 30 million years.

Freund, Friedemann↗

NASA NTRS1998

Resuspension of Particles by Aerodynamic Deagglomeration

A deagglomerator system was developed, characterized by laboratory tests and flown under low gravity (low-g) microgravity conditions. Requirements for a dry powder deagglomeration system were generated by university and National Aeronautics and Space Administration (NASA) scientists from diverse fields of interest including exobiology, planetary sciences, and atmospheric sciences. Existing deagglomeration methods and devices are reviewed. An aerosol generation method suitable for dry powders over a large range of particles sizes and types at high concentrations with consistent deagglomeration efficiency was evaluated. Development of a pulsed-flow laboratory device and experimental approaches to meet the requirements without being g- dependent are described. Results of laboratory one-g quantitative characterization on one type of dry powder particle generator is discussed. Data from NASA low-g tests are summarized.

Fonda, Mark↗

NASA NTRS1998

A New Optical Aerosol Spectrometer

An optical particle spectrometer capable of measuring aerosol particle size distributions from 0.02 to 100 micrometers has been developed. This instrument combines several optical methods in one, in-situ configuration; it can provide continuous data collection to encompass the wide dynamic size ranges and concentrations found in studies of modeled planetary atmospheres as well as terrestrial air quality research. Currently, the system is incorporated into an eight liter capacity spherical pressure vessel that is appropriate both for flowthrough and for in-situ particle generation. The optical sizing methods include polarization ratio, The scattering, and forward scattering detectors, with illumination from a fiber-coupled, Argon-ion laser. As particle sizes increase above 0.1 micrometer, a customized electronics and software system automatically shifts from polarization to diffraction-based measurements as the angular scattering detectors attain acceptable signal-to-noise ratios. The number concentration detection limits are estimated to be in the part-per-trillion (ppT by volume) range, or roughly 1000 submicron particles per cubic centimeter. Results from static experiments using HFC134A (approved light scattering gas standard), flow-through experiments using sodium chloride (NaCl) and carbon particles, and dynamic 'Tholin' (photochemical produced particles from ultraviolet (UV)-irradiated acetylene and nitrogen) experiments have been obtained. The optical spectrometer data obtained with particles have compared well with particle sizes determined by electron microscopy. The 'Tholin' tests provided real-time size and concentration data as the particles grew from about 30 nanometers to about 0.8 micrometers, with concentrations ranging from ppT to ppB, by volume. Tests are still underway, to better define sizing accuracy and concentration limits, these results will be reported.

Fonda, Mark↗

NASA NTRS1996

The concept of a facility for cosmic dust research on the International Space Station

A proposal for the development of a permanently operating facility for the experimental investigation of cosmic dust-related phenomena onboard the International Space Station (ISS) is presented. Potential applications for this facility are the convection-free nucleation of dust grains, studies of coagulation and aggregation phenomena in a microgravity environment, investigations of heat transport through, and dust emissions from, high-porosity cometary analogs, and experiments on the interaction of very fluffy dust grains with electromagnetic radiation and with low pressure gas flows. Possible extensions of such a facility are towards aerosol science and colloidal plasma research.

Blum, Juergen↗