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Chen, Yang

Publications and source records attributed to Chen, Yang.

At least 109 records · Page 6

Fusion Energy Sciences Exascale Requirements Review. An Office of Science review sponsored jointly by Advanced Scientific Computing Research and Fusion Energy Sciences, January 27-29, 2016, Gaithersburg, Maryland

The additional computing power offered by the planned exascale facilities could be transformational across the spectrum of plasma and fusion research — provided that the new architectures can be efficiently applied to our problem space. The collaboration that will be required to succeed should be viewed as an opportunity to identify and exploit cross-disciplinary synergies. To assess the opportunities and requirements as part of the development of an overall strategy for computing in the exascale era, the Exascale Requirements Review meeting of the Fusion Energy Sciences (FES) community was convened January 27–29, 2016, with participation from a broad range of fusion and plasma scientists, specialists in applied mathematics and computer science, and representatives from the U.S. Department of Energy (DOE) and its major computing facilities. This report is a summary of that meeting and the preparatory activities for it and includes a wealth of detail to support the findings. Technical opportunities, requirements, and challenges are detailed in this report (and in the recent report on the Workshop on Integrated Simulation). Science applications are described, along with mathematical and computational enabling technologies. Also see http://exascaleage.org/fes/ for more information.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

A NEW GENERATION OF PARSEC-COLIBRI STELLAR ISOCHRONES INCLUDING THE TP-AGB PHASE

We introduce a new generation of PARSEC–COLIBRI stellar isochrones that includes a detailed treatment of the thermally pulsing asymptotic giant branch (TP-AGB) phase, covering a wide range of initial metallicities (0.0001 < Z {sub i} < 0.06). Compared to previous releases, the main novelties and improvements are use of new TP-AGB tracks and related atmosphere models and spectra for M and C-type stars; inclusion of the surface H+He+CNO abundances in the isochrone tables, accounting for the effects of diffusion, dredge-up episodes and hot-bottom burning; inclusion of complete thermal pulse cycles, with a complete description of the in-cycle changes in the stellar parameters; new pulsation models to describe the long-period variability in the fundamental and first-overtone modes; and new dust models that follow the growth of the grains during the AGB evolution, in combination with radiative transfer calculations for the reprocessing of the photospheric emission. Overall, these improvements are expected to lead to a more consistent and detailed description of properties of TP-AGB stars expected in resolved stellar populations, especially in regard to their mean photometric properties from optical to mid-infrared wavelengths. We illustrate the expected numbers of TP-AGB stars of different types in stellar populations covering a wide range of ages and initial metallicities, providing further details on the “C-star island” that appears at intermediate values of age and metallicity, and about the AGB-boosting effect that occurs at ages close to 1.6-Gyr for populations of all metallicities. The isochrones are available through a new dedicated web server.

79 ASTRONOMY AND ASTROPHYSICS↗

Revealing pMDI Spray Initial Conditions: Flashing, Atomisation and the Effect of Ethanol

Sprays from pressurised metered-dose inhalers are produced by a transient discharge of a multiphase mixture. Small length and short time scales have made the investigation of the governing processes difficult. Consequently, a deep understanding of the physical processes that govern atomisation and drug particle formation has been elusive. X-ray phase contrast imaging and quantitative radiography were used to reveal the internal flow structure and measure the time-variant nozzle exit mass density of 50 µL metered sprays of HFA134a, with and without ethanol cosolvent. Internal flow patterns were imaged at a magnification of 194 pixels/mm and 7759 frames per second with 150 ps temporal resolution. Spray projected mass was measured with temporal resolution of 1 ms and spatial resolution 6 µm × 5 µm. The flow upstream of the nozzle comprised large volumes of vapour at all times throughout the injection. The inclusion of ethanol prevented bubble coalescence, altering the internal flow structure and discharge. Radiography measurements confirmed that the nozzle exit area is dominantly occupied by vapour, with a peak liquid volume fraction of 13%. Vapour generation in pMDIs occurs upstream of the sump, and the dominant volume component in the nozzle exit orifice is vapour at all times in the injection. Furthermore, the flow in ethanol-containing pMDIs has a bubbly structure resulting in a comparatively stable discharge, whereas the binary structure of propellant-only flows results in unsteady discharge and the production of unrespirable liquid masses.

42 ENGINEERING↗

Coxsackievirus B3 induces the formation of autophagosomes in cardiac fibroblasts both in vitro and in vivo

Coxsackievirus group B (CVB) is one of the common pathogens that cause myocarditis and cardiomyopathy. Evidence has shown that CVB replication in cardiomyocytes is responsible for the damage and loss of cardiac muscle and the dysfunction of the heart. However, it remains largely undefined how CVB would directly impact cardiac fibroblasts, the most abundant cells in human heart. In this study, cardiac fibroblasts were isolated from Balb/c mice and infected with CVB type 3 (CVB3). Increased double-membraned, autophagosome-like vesicles in the CVB3-infected cardiac fibroblasts were observed with electron microscope. Punctate distribution of LC3 and increased level of LC3-II were also detected in the infected cardiac fibroblasts. Furthermore, we observed that the expression of pro-inflammatory cytokines, IL-6 and TNF-α, was increased in the CVB3-infected cardiac fibroblasts, while suppressed autophagy by 3-MA and Atg7-siRNA inhibited cytokine expression. Consistent with the in vitro findings, increased formation of autophagosomes was observed in the cardiac fibroblasts of Balb/c mice infected with CVB3. In conclusion, our data demonstrated that cardiac fibroblasts respond to CVB3 infection with the formation of autophagosomes and the release of the pro-inflammatory cytokines. These results suggest that the autophagic response of cardiac fibroblasts may play a role in the pathogenesis of myocarditis caused by CVB3 infection. - Highlights: • CVB3 replication induced autophagosome assembly in primary cardiac fibroblasts. • Both IL-6 and TNF-α in cardiac fibroblasts infected by CVB3 were increased. • IL-6 and TNF-α were reduced in cardiac fibroblasts when autophagy was inhibited. • Autophagosome assembly in cardiac fibroblasts of CVB-infected mice was increased.

60 APPLIED LIFE SCIENCES↗

INTERACTION BETWEEN THE SUPERNOVA REMNANT HB 3 AND THE NEARBY STAR-FORMING REGION W3

We performed millimeter observations of CO lines toward the supernova remnant (SNR) HB 3. Substantial molecular gas around −45 km s{sup −1} is detected in the conjunction region between the SNR HB 3 and the nearby W3 complex. This molecular gas is distributed along the radio continuum shell of the remnant. Furthermore, the shocked molecular gas indicated by line wing broadening features is also distributed along the radio shell and inside it. By both morphological correspondence and dynamical evidence, we confirm that the SNR HB 3 interacts with the −45 km s{sup −1} molecular cloud (MC), in essence, with the nearby H ii region/MC complex W3. The redshifted line wing broadening features indicate that the remnant is located at the nearside of the MC. With this association, we could place the remnant at the same distance as the W3/W4 complex, which is 1.95 ± 0.04 kpc. The spatial distribution of aggregated young stellar object candidates shows a correlation with the shocked molecular strip associated with the remnant. We also find a binary clump of CO at ( l = 132.°94, b = 1.°12) around −51.5 km s{sup −1} inside the projected extent of the remnant, and it is associated with significant mid-infrared emission. The binary system also has a tail structure resembling the tidal tails of interacting galaxies. According to the analysis of CO emission lines, the larger clump in this binary system is about stable, and the smaller clump is significantly disturbed.

79 ASTRONOMY AND ASTROPHYSICS↗

Multi-wavelength study of the supernova remnant Kes 79 (G33.6+0.1): on its supernova properties and expansion into a molecular environment

Kes 79 (G33.6+0.1) is an aspherical thermal composite supernova remnant (SNR) observed across the electromagnetic spectrum and showing an unusual highly structured morphology, in addition to harboring a central compact object (CCO). Using the CO J = 1–0, J = 2–1, and J = 3–2 data, we provide the first direct evidence and new morphological evidence to support the physical interaction between the SNR and the molecular cloud in the local standard of rest velocity ∼105 km s{sup −1}. We revisit the 380 ks XMM-Newton observations and perform a dedicated spatially resolved X-ray spectroscopic study with careful background subtraction. The overall X-ray-emitting gas is characterized by an under-ionized (τ{sub c}∼6×10{sup 11} cm{sup −3}) cool (kT{sub c}≈0.20 keV) plasma with solar abundances, plus an under-ionized (τ{sub h}∼8×10{sup 10} cm{sup −3}) hot (kT{sub h}≈0.80 keV) plasma with elevated Ne, Mg, Si, S, and Ar abundances. The X-ray filaments, spatially correlated with the 24 μm IR filaments, are suggested to be due to the SNR shock interaction with dense gas, while the halo forms from SNR breaking out into a tenuous medium. Kes 79 appears to have a double-hemisphere morphology viewed along the symmetric axis. Projection effect can explain the multiple-shell structures and the thermal composite morphology. The high-velocity, hot (kT{sub h}∼1.4--1.6 keV) ejecta patch with high metal abundances, together with the non-uniform metal distribution across the SNR, indicate an asymmetric SN explosion of Kes 79. We refine the Sedov age to 4.4–6.7 kyr and the mean shock velocity to 730 km s{sup −1}. Our multi-wavelength study suggests a progenitor mass of ∼15–20 solar masses for the core-collapse explosion that formed Kes 79 and its CCO, PSR J1852+0040.

79 ASTRONOMY AND ASTROPHYSICS↗

Saturation of Alfvén modes in tokamaks

Here, the growth of Alfvén modes driven unstable by a distribution of high energy particles up to saturation is investigated with a guiding center code, using numerical eigenfunctions produced by linear theory and a numerical high energy particle distribution, in order to make detailed comparison with experiment and with models for saturation amplitudes and the modification of beam profiles. Two innovations are introduced. First, a very noise free means of obtaining the mode-particle energy and momentum transfer is introduced, and secondly, a spline representation of the actual beam particle distribution is used.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Comprehensive Exergy Analysis of Three IGCC Power Plant Configurations with CO 2 Capture

We have conducted comprehensive exergy analyses of three integrated gasification combined cycle with carbon capture and storage (IGCC-CCS) power plant configurations: (1) a baseline model using Selexol™ for H 2 S/CO 2 removal; (2) a modified version that adds a H 2 -selective membrane before the Selexol™ acid gas removal system; and (3) a modified baseline version that uses a CO 2 -selective membrane before the Selexol™ acid gas removal system. While holding the coal input flow rate and the CO 2 captured flow rates constant, it was determined that the H 2 -selective membrane case had a higher net power output (584 MW) compared to the baseline (564 MW) and compared to the CO 2 -selective membrane case (550 MW). Interestingly, the CO 2 -selective membrane case destroyed the least amount of exergy within the power plant (967 MW), compared with the Baseline case (999 MW) and the H 2 -membrane case (972 MW). The main problem with the CO 2 -selective membrane case was the large amount of H 2 (48 MW worth of H 2 chemical exergy) remaining within the supercritical CO 2 that exits the power plant. Finally, regardless of the CO 2 capture process used, the majority of the exergy destruction occurred in the gasifier (305 MW) and gas turbine (~380 MW) subsystems, suggesting that these two areas should be key areas of focus of future improvements.

20 FOSSIL-FUELED POWER PLANTS↗

EXPECTATION ON OBSERVATION OF SUPERNOVA REMNANTS WITH THE LHAASO PROJECT

Supernova remnants (SNRs) are believed to be the most important acceleration sites for cosmic rays (CRs) below ∼10{sup 15} eV in the Galaxy. High-energy photons, either directly from the shocks of the SNRs or indirectly from the interaction between SNRs and the nearby clouds, are crucial probes for the CR acceleration. Big progresses on observations of SNRs have been achieved by space- and ground-based γ -ray facilities. However, whether γ -rays come from accelerated hadrons or not, as well as their connection with the CRs observed at Earth, remains in debate. Large High Altitude Air Shower Observatory (LHAASO), a next-generation experiment, is designed to survey the northern part of the very high energy γ -ray sky from ∼0.3 TeV to PeV with the sensitivity of ≲1% of the Crab Nebula flux. In this paper, we indicate that LHAASO will be dedicated to enlarging the γ -ray SNR samples and improving the spectral and morphological measurements. These measurements, especially at energies above 30 TeV, will be important for us to finally understand the CR acceleration in SNRs.

79 ASTRONOMY AND ASTROPHYSICS↗

An implicit δf particle-in-cell method with sub-cycling and orbit averaging for Lorentz ions

A second order implicit δf Lorentz ion hybrid model with sub-cycling and orbit averaging has been developed to study low-frequency, quasi-neutral plasmas. Models using the full Lorentz force equations of motion for ions may be useful for verifying gyrokinetic ion simulation models in applications where higher order terms may be important. In the presence of a strong external magnetic field, previous Lorentz ion models are limited to simulating very short time scales due to the small time step required for resolving the ion gyromotion. Here, we use a simplified model for ion Landau damped ion acoustic waves in a uniform magnetic field as a test bed for developing efficient time stepping methods to be used with the Lorentz ion hybrid model. A detailed linear analysis of the model is derived to validate simulations and to examine the significance of ion Bernstein waves in the Lorentz ion model. Linear analysis of a gyrokinetic ion model is also performed, and excellent agreement with the dispersion results from the Lorentz ion model is demonstrated for the ion acoustic wave. The sub-cycling/orbit averaging algorithm is shown to produce accurate finite-Larmor-radius effects using large macro-time steps sizes, and numerical damping of high frequency fluctuations can be achieved by formulating the field model in terms of the perturbed flux density. Furthermore, a CPU–GPU implementation of the sub-cycling/orbit averaging is presented and is shown to achieve a significant speedup over an equivalent serial code.

Computer Science↗

THE LIKELY FERMI DETECTION OF THE SUPERNOVA REMNANT SN 1006

We report the likely detection of γ-ray emission from the northeast shell region of the historical supernova remnant (SNR) SN 1006. Having analyzed seven years of Fermi Large Area Telescope Pass 8 data for the region of SN 1006, we found a GeV gamma-ray source detected with ∼4σ significance. Both the position and spectrum of the source match those of HESS J1504−418, respectively, which is TeV emission from SN 1006. Considering the source as the GeV γ-ray counterpart to SN 1006, the broadband spectral energy distribution is found to be approximately consistent with the leptonic scenario that has been proposed for the TeV emission from the SNR. Our result has likely confirmed the previous study of the SNRs with TeV shell-like morphology: SN 1006 is one of them sharing very similar peak luminosity and spectral shape.

79 ASTRONOMY AND ASTROPHYSICS↗

Gyrokinetic particle simulation of fast-electron driven beta-induced Aflvén eigenmode

The fast-electron driven beta-induced Alfvén eigenmode (e-BAE) in toroidal plasmas is investigated for the first time using global gyrokinetic particle simulations, where the fast electron is described by the drift kinetic equation. The simulation shows that the e-BAE propagates in the fast electron diamagnetic direction and its polarization is close to an ideal MHD mode. The phase space structure shows that only the fast electron processional resonance is responsible for the e-BAE excitations while fast-ion driven BAE can be excited through all the channels, including transit, bounce, and processional resonance.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Automatic coronary calcium scoring using noncontrast and contrast CT images

Purpose: Calcium scoring is widely used to assess the risk of coronary heart disease (CHD). Accurate coronary artery calcification detection in noncontrast CT image is a prerequisite step for coronary calcium scoring. Currently, calcified lesions in the coronary arteries are manually identified by radiologists in clinical practice. Thus, in this paper, a fully automatic calcium scoring method was developed to alleviate the work load of the radiologists or cardiologists. Methods: The challenge of automatic coronary calcification detection is to discriminate the calcification in the coronary arteries from the calcification in the other tissues. Since the anatomy of coronary arteries is difficult to be observed in the noncontrast CT images, the contrast CT image of the same patient is used to extract the regions of the aorta, heart, and coronary arteries. Then, a patient-specific region-of-interest (ROI) is generated in the noncontrast CT image according to the segmentation results in the contrast CT image. This patient-specific ROI focuses on the regions in the neighborhood of coronary arteries for calcification detection, which can eliminate the calcifications in the surrounding tissues. A support vector machine classifier is applied finally to refine the results by removing possible image noise. Furthermore, the calcified lesions in the noncontrast images belonging to the different main coronary arteries are identified automatically using the labeling results of the extracted coronary arteries. Results: Forty datasets from four different CT machine vendors were used to evaluate their algorithm, which were provided by the MICCAI 2014 Coronary Calcium Scoring (orCaScore) Challenge. The sensitivity and positive predictive value for the volume of detected calcifications are 0.989 and 0.948. Only one patient out of 40 patients had been assigned to the wrong risk category defined according to Agatston scores (0, 1–100, 101–300, >300) by comparing with the ground truth. Conclusions: The calcified lesions in the noncontrast CT images can be detected automatically by using the segmentation results of the aorta, heart, and coronary arteries obtained in the contrast CT images with a very high accuracy.

60 APPLIED LIFE SCIENCES↗

THE ROLE OF THE DIFFUSIVE PROTONS IN THE GAMMA-RAY EMISSION OF SUPERNOVA REMNANT RX J1713.7–3946—A TWO-ZONE MODEL

RX J1713.7−3946 is a prototype in the γ-ray-bright supernova remnants (SNRs) and is in continuing debates on its hadronic versus leptonic origin of the γ-ray emission. We explore the role played by the diffusive relativistic protons that escape from the SNR shock wave in the γ-ray emission, apart from the high-energy particles’ emission from the inside of the SNR. In the scenario that the SNR shock propagates in a clumpy molecular cavity, we consider that the γ-ray emission from the inside of the SNR may arise either from the inverse Compton scattering or from the interaction between the trapped energetic protons and the shocked clumps. The dominant origin between them depends on the electron-to-proton number ratio. The diffusive protons that escaped from the shock wave during the expansion history can provide an outer hadronic γ-ray component by bombarding the surrounding dense matter. The broadband spectrum can be well explained by this two-zone model, in which the γ-ray emission from the inside governs the TeV band, while the outer emission component substantially contributes to the GeV γ-rays. The two-zone model can also explain the TeV γ-ray radial brightness profile that significantly stretches beyond the nonthermal X-ray-emitting region. In the calculation, we present a simplified algorithm for Li and Chen's “accumulative diffusion” model for escaping protons and apply the Markov Chain Monte Carlo method to constrain the physical parameters.

79 ASTRONOMY AND ASTROPHYSICS↗

How Much Global Burned Area Can Be Forecast on Seasonal Time Scales Using Sea Surface Temperatures?

Large-scale sea surface temperature (SST) patterns influence the interannual variability of burned area in many regions by means of climate controls on fuel continuity, amount, and moisture content. Some of the variability in burned area is predictable on seasonal timescales because fuel characteristics respond to the cumulative effects of climate prior to the onset of the fire season. Here we systematically evaluated the degree to which annual burned area from the Global Fire Emissions Database version 4 with small fires (GFED4s) can be predicted using SSTs from 14 different ocean regions. We found that about 48 of global burned area can be forecast with a correlation coefficient that is significant at a p < 0.01 level using a single ocean climate index (OCI) 3 or more months prior to the month of peak burning. Continental regions where burned area had a higher degree of predictability included equatorial Asia, where 92% of the burned area exceeded the correlation threshold, and Central America, where 86% of the burned area exceeded this threshold. Pacific Ocean indices describing the El Nino-Southern Oscillation were more important than indices from other ocean basins, accounting for about 1/3 of the total predictable global burned area. A model that combined two indices from different oceans considerably improved model performance, suggesting that fires in many regions respond to forcing from more than one ocean basin. Using OCI-burned area relationships and a clustering algorithm, we identified 12 hotspot regions in which fires had a consistent response to SST patterns. Annual burned area in these regions can be predicted with moderate confidence levels, suggesting operational forecasts may be possible with the aim of improving ecosystem management.

Chen, Yang↗

Insights into Spray Development from Metered-Dose Inhalers Through Quantitative X-ray Radiography

Typical methods to study pMDI sprays employ particle sizing or visible light diagnostics, which suffer in regions of high spray density. X-ray techniques can be applied to pharmaceutical sprays to obtain information unattainable by conventional particle sizing and light-based techniques. We present a technique for obtaining quantitative measurements of spray density in pMDI sprays. A monochromatic focused X-ray beam was used to perform quantitative radiography measurements in the near-nozzle region and plume of HFA-propelled sprays. Measurements were obtained with a temporal resolution of 0.184 ms and spatial resolution of 5 mu m. Steady flow conditions were reached after around 30 ms for the formulations examined with the spray device used. Spray evolution was affected by the inclusion of ethanol in the formulation and unaffected by the inclusion of 0.1% drug by weight. Estimation of the nozzle exit density showed that vapour is likely to dominate the flow leaving the inhaler nozzle during steady flow. Quantitative measurements in pMDI sprays allow the determination of nozzle exit conditions that are difficult to obtain experimentally by other means. Measurements of these nozzle exit conditions can improve understanding of the atomization mechanisms responsible for pMDI spray droplet and particle formation.

Pressurized metered dose inhaler↗