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Baker, K.

Publications and source records attributed to Baker, K..

At least 19 records

Computational design of highly signalling-active membrane receptors through solvent-mediated allosteric networks

Abstract Protein catalysis and allostery require the atomic-level orchestration and motion of residues and ligand, solvent and protein effector molecules. However, the ability to design protein activity through precise protein–solvent cooperative interactions has not yet been demonstrated. Here we report the design of 14 membrane receptors that catalyse G protein nucleotide exchange through diverse engineered allosteric pathways mediated by cooperative networks of intraprotein, protein–ligand and –solvent molecule interactions. Consistent with predictions, the designed protein activities correlated well with the level of plasticity of the networks at flexible transmembrane helical interfaces. Several designs displayed considerably enhanced thermostability and activity compared with related natural receptors. The most stable and active variant crystallized in an unforeseen signalling-active conformation, in excellent agreement with the design models. The allosteric network topologies of the best designs bear limited similarity to those of natural receptors and reveal an allosteric interaction space larger than previously inferred from natural proteins. The approach should prove useful for engineering proteins with novel complex protein binding, catalytic and signalling activities.

Chemistry↗

Achieving record hot spot energies with large HDC implosions on NIF in HYBRID-E

HYBRID-E is an inertial confinement fusion implosion design that increases energy coupled to the hot spot by increasing the capsule scale in cylindrical hohlraums while operating within the current experimental limits of the National Ignition Facility. HYBRID-E reduces the hohlraum scale at a fixed capsule size compared to previous HYBRID designs, thereby increasing the hohlraum efficiency and energy coupled to the capsule, and uses the cross-beam energy transfer (CBET) to control the implosion symmetry by operating the inner (23° and 30°) and outer (44° and 50°) laser beams at different wavelengths (Δλ> 0). Small case to capsule ratio designs can suffer from insufficient drive at the waist of the hohlraum. We show that only a small amount of wavelength separation between the inner and outer beams (Δλ1-2 Å) is required to control the symmetry in low-gas-filled hohlraums (0.3 mg/cm3 He) with enough drive at the waist of the hohlraum to symmetrically drive capsules 1180 μm in outer radius. This campaign is the first to use the CBET to control the symmetry in 0.3 mg/cm3 He-filled hohlraums, the lowest gas fill density yet fielded with Δλ> 0. We find a stronger sensitivity of hot spot P2 in μm per Angstrom (40–50 μm/Å wavelength separation) than observed in high-gas-filled hohlraums and previous longer pulse designs that used a hohlraum gas fill density of 0.6 mg/cm3. There is currently no indication of transfer roll-off with increasing Δλ, indicating that even longer pulses or larger capsules could be driven using the CBET in cylindrical hohlraums. We show that the radiation flux symmetry is well controlled during the foot of the pulse, and that the entire implosion can be tuned symmetrically in the presence of the CBET in this system, with low levels of laser backscatter out of the hohlraum and low levels of hot electron production from intense laser–plasma interactions. Radiation hydrodynamic simulations can accurately represent the early shock symmetry and be used as a design tool, but cannot predict the late-time radiation flux symmetry during the peak of the pulse, and semi-empirical models are used to design the experiments. Deuterium–tritium (DT)-layered tests of 1100 μm inner radius implosions showed performance close to expectations from simulations at velocities up to ~360 km/s, and record yields at this velocity, when increasing the DT fuel layer thickness to mitigate hydrodynamic mixing of the ablator into the hot spot as a result of defects in the ablator. However, when the implosion velocity was increased, mixing due to these defects impacted performance. The ratio of measured to simulated yield for these experiments was directly correlated with the level of observed mixing. These simulations suggest that reducing the mixing, e.g., by improving the capsule defects, could result in higher performance. In addition, future experiments are planned to reduce the coast time at this scale, delay between the peak compression and the end of the laser, to increase the hot spot convergence and pressure. To reduce the coast time by several hundred ps compared to the 1100 μm inner radius implosions, HYBRID-E has also fielded 1050 μm inner radius capsules, which resulted in higher hot spot pressure and a fusion energy yield of ~170 kJ.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Evidence of Three-Dimensional Asymmetries Seeded by High-Density Carbon-Ablator Nonuniformity in Experiments at the National Ignition Facility

Inertial confinement fusion implosions must achieve high in-flight shell velocity, sufficient energy coupling between the hot spot and imploding shell, and high areal density ( ρ R = ∫ ρ d r ) at stagnation. Asymmetries in ρ R degrade the coupling of shell kinetic energy to the hot spot and reduce the confinement of that energy. In this study, we present the first evidence that nonuniformity in the ablator shell thickness ( ~ 0.5 % of the total thickness) in high-density carbon experiments is a significant cause for observed 3D ρ R asymmetries at the National Ignition Facility. These shell-thickness nonuniformities have significantly impacted some recent experiments leading to ρ R asymmetries on the order of ~ 25 % of the average ρ R and hot spot velocities of ~ 100 km / s . This work reveals the origin of a significant implosion performance degradation in ignition experiments and places stringent new requirements on capsule thickness metrology and symmetry.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Record Energetics for an Inertial Fusion Implosion at NIF

Inertial confinement fusion seeks to create burning plasma conditions in a spherical capsule implosion, which requires efficiently absorbing the driver energy in the capsule, transferring that energy into kinetic energy of the imploding DT fuel and then into internal energy of the fuel at stagnation. In this work, we report new implosions conducted on the National Ignition Facility (NIF) with several improvements on recent work [Phys. Rev. Lett. 120, 245003 (2018); Phys. Rev. E 102, 023210 (2020)]: larger capsules, thicker fuel layers to mitigate fuel-ablator mix, and new symmetry control via cross-beam energy transfer; at modest velocities, these experiments achieve record values for the implosion energetics figures of merit as well as fusion yield for a NIF experiment.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Understanding asymmetries using integrated simulations of capsule implosions in low gas-fill hohlraums at the National Ignition Facility

Current capsule implosions at the National Ignition Facility (NIF) using high-density-carbon ablators and laser energies close to 2 MJ have shown neutron yields in excess of 50 kJ. Improving on this performance requires understanding of the different degradation mechanisms. For many NIF implosions, nuclear diagnostic signatures have inferred residual hot-spot velocities that correlate with fuel areal density variations consistent with a low-order mode-1 asymmetry. A current working hypothesis attributes these asymmetries to a combination of beam to beam variations in the laser delivery and possibly coupling to target features, such as the diagnostic holes needed for x-ray imaging. Recently, a new source has been identified, thickness variation in the ablator shell. To gain better understanding and eventually mitigate the causes of <ρR> asymmetries, 3D integrated simulations using the actual delivered laser powers are needed. To capture the effect of the diagnostic holes (DHs) using direct numerical simulation would require significantly large computational resources. Instead, our 3D simulations make use of a subgrid model developed using highly-resolved 2D simulations that include several details of the DH engineering complexity. Simulations of NIF shots using hohlraums without DHs, to isolate the effect of beam-to-beam variations, reproduce fairly well the observed nuclear diagnostic signatures. Similarly, reasonable agreement between data and simulations is also obtained in the presence of diagnostic holes. To account for the remaining discrepancies a sensitivity study of ablator thickness variation showed that 1% thickness asymmetries are comparable in effect to 1% peak drive mode-1 asymmetries. Furthermore, this study identified sensitivity to variations in the imbedded doped layer (needed to shield the DT ice from the high energy x-rays generated in the hohlraum) thickness even when the inner and outer surface of the ablator are perfectly spherical.

radiation hydrodynamics↗

Foam-lined hohlraum, inertial confinement fusion experiments on the National Ignition Facility

Experiments on the National Ignition Facility (NIF) to study hohlraums lined with a 20-mg/cc 400-μm-thick Ta 2 O 5 aerogel at full scale (hohlraum diameter = 6.72 mm) are reported. Driven with a 1.6-MJ, 450-TW laser pulse, the performance of the foam liner is diagnosed using implosion hot-spot symmetry measurements of the high-density carbon (HDC) capsule and measurement of inner beam propagation through a thin-wall 8-μm Au window in the hohlraum. Results show an improved capsule performance due to laser energy deposition further inside the hohlraum, leading to a modest increase in x-ray drive and reduced preheat due to changes in the x-ray spectrum when the foam liner is included. In addition, the outer cone bubble uniformity is improved, but the predicted improvement in inner beam propagation to improve symmetry control is not realized for this foam thickness and density.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Hot-spot mix in large-scale HDC implosions at NIF

Mix of high-Z material from the capsule into the fuel can severely degrade the performance of inertial fusion implosions. On the Hybrid B campaign, testing the largest high-density-carbon capsules yet fielded at the National Ignition Facility, several shots show signatures of high levels of hot-spot mix. We attribute a ~40% yield degradation on these shots to the hot-spot mix, comparable to the level of degradation from large $P_2$ asymmetries observed on some shots. Additionally, a range of instability growth factors and diamond crystallinity were tested and they do not determine the level of mix for these implosions, which is instead set by the capsule quality.

Fusion experiments↗

Symmetric fielding of the largest diamond capsule implosions on the NIF

We present results for the largest diamond capsule implosions driven symmetrically on the National Ignition Facility (NIF) (inner radius of ~1050 μm) without the use of cross beam transfer in cylindrical Hohlraums. We show that the methodology of designing Hohlraum parameters in a semi-empirical way using an extensive database resulted in a round implosion. In addition, we show that the radiation flux symmetry is well controlled during the foot of the pulse and that swings in P2 symmetry between the inflight dense shell and hot spot are within ±4 μm and that swings around peak compression are also within the symmetry specification of ±4 μm. We observed a stronger dependence of symmetry on the capsule scale than previously observed and also observed enhanced inner beam propagation for experiments using a gas fill density of 0.3 mg/cm 3 and 1000 μm inner radius capsules. We have observed sufficient symmetry and mass remaining at near full NIF power and energy, up to 480 TW and 1.9 MJ, with little laser–plasma interactions (low laser backscattered light) and predict that this design could support extended NIF energy of up to 2.1 MJ.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Carbon ablator areal density at fusion burn: Observations and trends at the National Ignition Facility

For inertial confinement fusion experiments, the pusher is composed of a high-density deuterium tritium cyrogenic fuel layer and an ablator, often made of carbon. In an ideal, no-mix implosion, increasing the areal density of the pusher transfers more pressure to the hot spot and increases the hot spot confinement time. There has been a lack of knowledge about the final compressed state of the ablator for implosions at the National Ignition Facility. 14 MeV fusion neutrons inelastically scattering on the remaining carbon ablator excites a nuclear metastable state that emits a prompt 4.4 MeV gamma ray. The gamma reaction history diagnostic data, when reduced by a new data analysis technique, can isolate and measure the carbon gamma rays, which are proportional to the areal density of the ablator during fusion burn. The trends over many National Ignition Facility campaigns show that the ablator areal density is weakly sensitive to the maximum shell velocity, the cold fuel radius, the ablator mass remaining, or the laser picket intensity. Controlled parameter scans reveal that, for specific campaigns, ablator compression has a strong dependence on laser coast time, high Z dopants, and the laser drive foot duration. Using a model of the compressed ablator density profile reveals that the greatest variation of the ablator areal density comes from its thickness, with highly compressed, thin layers having high areal density values. The compression and thickness of the ablator are other metrics that designers should understand to differentiate the types of capsule degradation and maximize the inertial confinement fusion performance.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

High precision measurement of Compton scattering in the 5 GeV region

The cross section of atomic electron Compton scattering $\gamma + e \rightarrow \gamma^\prime + e^\prime $ was measured in the 4.40--5.475 GeV photon beam energy region by the {\em PrimEx} collaboration at Jefferson Lab with an accuracy of 2\% and less. The results are consistent with theoretical predictions that include next-to-leading order radiative corrections. The measurements provide the first high precision test of this elementary QED process at beam energies greater than 0.1 GeV.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Approaching a burning plasma on the NIF

The locus of National Ignition Facility (NIF) inertial confinement fusion (ICF) implosion data, in hot-spot burn-average areal density (ρR) and Brysk temperature (T) space, is shown here and illustrates that several implosions are nearing a burning plasma state, where α-heating is the dominant source of plasma heating. A formula for diagnosing a burning plasma using measured/inferred data from ICF implosion experiments is given with the underlying derivation. Plotting ICF implosion performance against inferred hot-spot energy illustrates the key need to maximize the delivery of energy to an implosion hot-spot. A very compact analytical equation for α-heating is given, which shows that fundamentally, α-heating provides a discrete “boost” to p V γ of an implosion hot-spot. It is then shown numerically that the analytical expression for the amplification of p V γ is simply related to yield amplification and to other more famous metrics used for inferring yield amplification in experiments. Interestingly, the argument of the p V γ boost equation appears to provide a fundamental ignition condition that implicitly includes the effects of asymmetry, and it also exposes the origin of why there is uncertainty in defining single ignition criteria. The resulting analysis of NIF implosion data indicates that an increase in burn-average hot-spot temperature will be needed in order to ignite, and the strategy being pursued to achieve this goal is outlined.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Four Years of Airborne Measurements of Wildfire Emissions in California, with a Focus on the Evolution of Emissions During the Soberanes Megafire

Biomass burning is an important source of trace gases and particles which can influence air quality on local, regional, and global scales. With wildfire events increasing due to changes in land use, increasing population, and climate change, characterizing wildfire emissions and their evolution is vital. In this work we report in situ airborne measurements of carbon dioxide (CO2), methane (CH4), water vapor (H2O), ozone (O3), and formaldehyde (HCHO) from nine wildfire events in California between 2013 and 2016, which were sampled as part of the Alpha Jet Atmospheric eXperiment (AJAX) based at NASA Ames Research Center. One of those fires, the Soberanes Megafire, began on 22 July 2016 and burned for three months. During that time, five flights were executed to sample emissions near and downwind of the Soberanes wildfire. In situ data are used to determine enhancement ratios (ERs), or excess mixing ratio relative to CO2, as well as assess O3 production from the fire. Changes in the emissions as a function of fire evolution are explored. Air quality impacts downwind of the fire are addressed using ground-based monitoring site data, satellite smoke products, and the Community Multiscale Air Quality (CMAQ) photochemical grid model.

Iraci, Laura T.↗

Beyond alpha-heating: driving inertially confined fusion implosions toward a burning-plasma state on the National Ignition Facility

Recent progress on indirectly-driven inertial confinement fusion (ICF) work at the National Ignition Facility (NIF) is briefly reviewed. An analytic criteria for an ICF burning plasma is given and compared to recent ICF implosion data from the NIF. Scaling of key hot-spot performance metrics is derived from simple physics considerations, including some speculative impacts of asymmetry on the assembly and disassembly of an ICF implosion. A steepest descent solution for the nonlinear equation for hot-spot pressure at peak compression, with the full effects of alpha-heating, is also given. To test if the scalings derived in this paper have some merit, they are compared to data from a variety of recent implosion campaigns on NIF and good agreement is observed. Given the implications of the scalings and existing data, a strategy for injecting more energy into the hot-spot of NIF indirectly driven ICF implosions is defined and the principles of the strategy is discussed. The importance of implosion velocity, late-time ablation pressure, and implosion scale with good symmetry in obtaining the goal of ~50% more hot-spot energy are highlighted along with the limitations of trying to leverage low fuel-adiabat.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

NIF S600D Snout Final Design Review (FDR) Report

The S600D is a one or two channel mirror spectrometer which will provide temporal and spatial soft x-ray data in a single NIF shot. It mounts to the existing DIM Imaging Streak Camera (DISC) using the standard NIF kinematic mount design. LLE and LLNL each have responsibilities for the snout. The Laboratory for Laser Energetics (LLE) is subcontracted to design, fabricate, and align the S600D Snout at the OMEGA Laser facility in Rochester, NY before delivery to LLNL. The Snout consists of the Mirror Mount, Kinematic interface to DISC, Slit mount, and filter pack mount. Lawrence Livermore National Laboratory (LLNL) is responsible to fabricate and deliver the Mirror substrates and coatings, Pinhole slits and collimators, Filter material, and Image plates. LLNL is also responsible for the Requirements Definition, Concept of Operations, Debris and Shrapnel analysis, Stakeholder reviews and Integration in the NIF Facility.

42 ENGINEERING↗

High precision photon flux determination for photon tagging experiments

The Jefferson Laboratory PrimEx Collaboration has developed and implemented a method to control the tagged photon flux in photoproduction experiments at the 1% level over the photon energy range from 4.9 to 5.5 GeV. This method has been successfully implemented in a high precision measurement of the neutral pion lifetime. Here, we outline the experimental equipment and the analysis techniques used to accomplish this. These include the use of a total absorption counter for absolute flux calibration, a pair spectrometer for online relative flux monitoring, and a new method for post-bremsstrahlung electron counting.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

FY14 LLNL OMEGA Experimental Programs

In FY14, LLNL’s High-Energy-Density Physics (HED) and Indirect Drive Inertial Confinement Fusion (ICF-ID) programs conducted several campaigns on the OMEGA laser system and on the EP laser system, as well as campaigns that used the OMEGA and EP beams jointly. Overall these LLNL programs led 324 target shots in FY14, with 246 shots using just the OMEGA laser system, 62 shots using just the EP laser system, and 16 Joint shots using Omega and EP together. Approximately 31% of the total number of shots (62 OMEGA shots, 42 EP shots) shots supported the Indirect Drive Inertial Confinement Fusion Campaign (ICF-ID). The remaining 69% (200 OMEGA shots and 36 EP shots, including the 16 Joint shots) were dedicated to experiments for High- Energy-Density Physics (HED). Highlights of the various HED and ICF campaigns are summarized in the following reports.

36 MATERIALS SCIENCE↗

Spectral encoding method for measuring the relative arrival time between x-ray/optical pulses

The advent of few femtosecond x-ray light sources brings promise of x-ray/optical pump-probe experiments that can measure chemical and structural changes in the 10–100 fs time regime. Widely distributed timing systems used at x-ray Free-Electron Laser facilities are typically limited to above 50 fs fwhm jitter in active x-ray/optical synchronization. The approach of single-shot timing measurements is used to sort results in the event processing stage. This has seen wide use to accommodate the insufficient precision of active stabilization schemes. In this article, we review the current technique for “measure-and-sort” at the Linac Coherent Light Source at the SLAC National Accelerator Laboratory. The relative arrival time between an x-ray pulse and an optical pulse is measured near the experimental interaction region as a spectrally encoded cross-correlation signal. The cross-correlation provides a time-stamp for filter-and-sort algorithms used for real-time sorting. Sub-10 fs rms resolution is common in this technique, placing timing precision at the same scale as the duration of the shortest achievable x-ray pulses.

43 PARTICLE ACCELERATORS↗

Radiation transport and energetics of laser-driven half-hohlraums at the National Ignition Facility

Experiments that characterize and develop a high energy-density half-hohlraum platform for use in benchmarking radiation hydrodynamics models have been conducted at the National Ignition Facility (NIF). Results from the experiments are used to quantitatively compare with simulations of the radiation transported through an evolving plasma density structure, colloquially known as an N-wave. A half-hohlraum is heated by 80 NIF beams to a temperature of 240 eV. This creates a subsonic diffusive Marshak wave, which propagates into a high atomic number Ta{sub 2}O{sub 5} aerogel. The subsequent radiation transport through the aerogel and through slots cut into the aerogel layer is investigated. We describe a set of experiments that test the hohlraum performance and report on a range of x-ray measurements that absolutely quantify the energetics and radiation partition inside the target.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗